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|
######################################################################
# Makefile - command file for make to create CBFlib #
# #
# Version 0.7.9 28 Dec 2007 #
# #
# Paul Ellis and #
# Herbert J. Bernstein (yaya@bernstein-plus-sons.com) #
# #
# (C) Copyright 2006 - 2007 Herbert J. Bernstein #
# #
######################################################################
######################################################################
# #
# YOU MAY REDISTRIBUTE THE CBFLIB PACKAGE UNDER THE TERMS OF THE GPL #
# #
# ALTERNATIVELY YOU MAY REDISTRIBUTE THE CBFLIB API UNDER THE TERMS #
# OF THE LGPL #
# #
######################################################################
########################### GPL NOTICES ##############################
# #
# This program is free software; you can redistribute it and/or #
# modify it under the terms of the GNU General Public License as #
# published by the Free Software Foundation; either version 2 of #
# (the License, or (at your option) any later version. #
# #
# This program is distributed in the hope that it will be useful, #
# but WITHOUT ANY WARRANTY; without even the implied warranty of #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program; if not, write to the Free Software #
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA #
# 02111-1307 USA #
# #
######################################################################
######################### LGPL NOTICES ###############################
# #
# This library is free software; you can redistribute it and/or #
# modify it under the terms of the GNU Lesser General Public #
# License as published by the Free Software Foundation; either #
# version 2.1 of the License, or (at your option) any later version. #
# #
# This library is distributed in the hope that it will be useful, #
# but WITHOUT ANY WARRANTY; without even the implied warranty of #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU #
# Lesser General Public License for more details. #
# #
# You should have received a copy of the GNU Lesser General Public #
# License along with this library; if not, write to the Free #
# Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, #
# MA 02110-1301 USA #
# #
######################################################################
######################################################################
# #
# Stanford University Notices #
# for the CBFlib software package that incorporates SLAC software #
# on which copyright is disclaimed #
# #
# This software #
# ------------- #
# The term "this software", as used in these Notices, refers to #
# those portions of the software package CBFlib that were created by #
# employees of the Stanford Linear Accelerator Center, Stanford #
# University. #
# #
# Stanford disclaimer of copyright #
# -------------------------------- #
# Stanford University, owner of the copyright, hereby disclaims its #
# copyright and all other rights in this software. Hence, anyone #
# may freely use it for any purpose without restriction. #
# #
# Acknowledgement of sponsorship #
# ------------------------------ #
# This software was produced by the Stanford Linear Accelerator #
# Center, Stanford University, under Contract DE-AC03-76SFO0515 with #
# the Department of Energy. #
# #
# Government disclaimer of liability #
# ---------------------------------- #
# Neither the United States nor the United States Department of #
# Energy, nor any of their employees, makes any warranty, express or #
# implied, or assumes any legal liability or responsibility for the #
# accuracy, completeness, or usefulness of any data, apparatus, #
# product, or process disclosed, or represents that its use would #
# not infringe privately owned rights. #
# #
# Stanford disclaimer of liability #
# -------------------------------- #
# Stanford University makes no representations or warranties, #
# express or implied, nor assumes any liability for the use of this #
# software. #
# #
# Maintenance of notices #
# ---------------------- #
# In the interest of clarity regarding the origin and status of this #
# software, this and all the preceding Stanford University notices #
# are to remain affixed to any copy or derivative of this software #
# made or distributed by the recipient and are to be affixed to any #
# copy of software made or distributed by the recipient that #
# contains a copy or derivative of this software. #
# #
# Based on SLAC Software Notices, Set 4 #
# OTT.002a, 2004 FEB 03 #
######################################################################
######################################################################
# NOTICE #
# Creative endeavors depend on the lively exchange of ideas. There #
# are laws and customs which establish rights and responsibilities #
# for authors and the users of what authors create. This notice #
# is not intended to prevent you from using the software and #
# documents in this package, but to ensure that there are no #
# misunderstandings about terms and conditions of such use. #
# #
# Please read the following notice carefully. If you do not #
# understand any portion of this notice, please seek appropriate #
# professional legal advice before making use of the software and #
# documents included in this software package. In addition to #
# whatever other steps you may be obliged to take to respect the #
# intellectual property rights of the various parties involved, if #
# you do make use of the software and documents in this package, #
# please give credit where credit is due by citing this package, #
# its authors and the URL or other source from which you obtained #
# it, or equivalent primary references in the literature with the #
# same authors. #
# #
# Some of the software and documents included within this software #
# package are the intellectual property of various parties, and #
# placement in this package does not in any way imply that any #
# such rights have in any way been waived or diminished. #
# #
# With respect to any software or documents for which a copyright #
# exists, ALL RIGHTS ARE RESERVED TO THE OWNERS OF SUCH COPYRIGHT. #
# #
# Even though the authors of the various documents and software #
# found here have made a good faith effort to ensure that the #
# documents are correct and that the software performs according #
# to its documentation, and we would greatly appreciate hearing of #
# any problems you may encounter, the programs and documents any #
# files created by the programs are provided **AS IS** without any *
# warranty as to correctness, merchantability or fitness for any #
# particular or general use. #
# #
# THE RESPONSIBILITY FOR ANY ADVERSE CONSEQUENCES FROM THE USE OF #
# PROGRAMS OR DOCUMENTS OR ANY FILE OR FILES CREATED BY USE OF THE #
# PROGRAMS OR DOCUMENTS LIES SOLELY WITH THE USERS OF THE PROGRAMS #
# OR DOCUMENTS OR FILE OR FILES AND NOT WITH AUTHORS OF THE #
# PROGRAMS OR DOCUMENTS. #
######################################################################
######################################################################
# #
# The IUCr Policy #
# for the Protection and the Promotion of the STAR File and #
# CIF Standards for Exchanging and Archiving Electronic Data #
# #
# Overview #
# #
# The Crystallographic Information File (CIF)[1] is a standard for #
# information interchange promulgated by the International Union of #
# Crystallography (IUCr). CIF (Hall, Allen & Brown, 1991) is the #
# recommended method for submitting publications to Acta #
# Crystallographica Section C and reports of crystal structure #
# determinations to other sections of Acta Crystallographica #
# and many other journals. The syntax of a CIF is a subset of the #
# more general STAR File[2] format. The CIF and STAR File approaches #
# are used increasingly in the structural sciences for data exchange #
# and archiving, and are having a significant influence on these #
# activities in other fields. #
# #
# Statement of intent #
# #
# The IUCr's interest in the STAR File is as a general data #
# interchange standard for science, and its interest in the CIF, #
# a conformant derivative of the STAR File, is as a concise data #
# exchange and archival standard for crystallography and structural #
# science. #
# #
# Protection of the standards #
# #
# To protect the STAR File and the CIF as standards for #
# interchanging and archiving electronic data, the IUCr, on behalf #
# of the scientific community, #
# #
# # holds the copyrights on the standards themselves, *
# #
# # owns the associated trademarks and service marks, and *
# #
# # holds a patent on the STAR File. *
# #
# These intellectual property rights relate solely to the #
# interchange formats, not to the data contained therein, nor to #
# the software used in the generation, access or manipulation of #
# the data. #
# #
# Promotion of the standards #
# #
# The sole requirement that the IUCr, in its protective role, #
# imposes on software purporting to process STAR File or CIF data #
# is that the following conditions be met prior to sale or #
# distribution. #
# #
# # Software claiming to read files written to either the STAR *
# File or the CIF standard must be able to extract the pertinent #
# data from a file conformant to the STAR File syntax, or the CIF #
# syntax, respectively. #
# #
# # Software claiming to write files in either the STAR File, or *
# the CIF, standard must produce files that are conformant to the #
# STAR File syntax, or the CIF syntax, respectively. #
# #
# # Software claiming to read definitions from a specific data *
# dictionary approved by the IUCr must be able to extract any #
# pertinent definition which is conformant to the dictionary #
# definition language (DDL)[3] associated with that dictionary. #
# #
# The IUCr, through its Committee on CIF Standards, will assist #
# any developer to verify that software meets these conformance #
# conditions. #
# #
# Glossary of terms #
# #
# [1] CIF: is a data file conformant to the file syntax defined #
# at http://www.iucr.org/iucr-top/cif/spec/index.html #
# #
# [2] STAR File: is a data file conformant to the file syntax #
# defined at http://www.iucr.org/iucr-top/cif/spec/star/index.html #
# #
# [3] DDL: is a language used in a data dictionary to define data #
# items in terms of "attributes". Dictionaries currently approved #
# by the IUCr, and the DDL versions used to construct these #
# dictionaries, are listed at #
# http://www.iucr.org/iucr-top/cif/spec/ddl/index.html #
# #
# Last modified: 30 September 2000 #
# #
# IUCr Policy Copyright (C) 2000 International Union of #
# Crystallography #
######################################################################
# Version string
VERSION = 0.7.9
#
# Definitions to get gnu version of getopt or system version of getopt
#
#GETOPT = SYSTEM
ifeq ($(GETOPT),)
GETOPT = getopt-1.1.4_cbf
endif
# Program to use to retrieve a URL
DOWNLOAD = /usr/bin/wget
# Flag to control symlinks versus copying
SLFLAGS = --use_ln
#
# Program to use to pack shars
#
SHAR = /usr/bin/shar
#SHAR = /usr/local/bin/gshar
#
# Program to use to create archives
#
AR = /usr/bin/ar
#
# Program to use to add an index to an archive
#
RANLIB = /usr/bin/ranlib
#
# Program to use to decompress a data file
#
DECOMPRESS = /usr/bin/bunzip2
#
# Program to use to compress a data file
#
COMPRESS = /usr/bin/bzip2
#
# Program to use to generate a signature
#
SIGNATURE = /usr/bin/openssl dgst -md5
#
# Extension for compressed data file (with period)
#
CEXT = .bz2
#
# Extension for signatures of files
#
SEXT = .md5
# call to time a command
#TIME =
#TIME = time
#
# Set the compiler and flags
#
#########################################################
#
# Appropriate compiler definitions for Linux
#
#########################################################
CC = gcc
C++ = g++
CFLAGS = -g -O2 -Wall -ansi -pedantic
F90C = gfortran
F90FLAGS = -g
F90LDFLAGS =
M4FLAGS = -Dfcb_bytes_in_rec=131072
TIME = time
ifneq ($(NOFORTRAN),)
F90C =
endif
#
# Directories
#
ROOT = .
LIB = $(ROOT)/lib
BIN = $(ROOT)/bin
SRC = $(ROOT)/src
INCLUDE = $(ROOT)/include
M4 = $(ROOT)/m4
PYCBF = $(ROOT)/pycbf
EXAMPLES = $(ROOT)/examples
DOC = $(ROOT)/doc
GRAPHICS = $(ROOT)/html_graphics
DATADIRI = $(ROOT)/../CBFlib_$(VERSION)_Data_Files_Input
DATADIRO = $(ROOT)/../CBFlib_$(VERSION)_Data_Files_Output
DATADIRS = $(ROOT)/../CBFlib_$(VERSION)_Data_Files_Output_Sigs_Only
INSTALLDIR = $(HOME)
#
# URLs from which to retrieve the data directories
#
DATAURLBASE = http://arcib.dowling.edu/software/CBFlib/downloads/version_$(VERSION)
DATAURLI = $(DATAURLBASE)/CBFlib_$(VERSION)_Data_Files_Input.tar.gz
DATAURLO = $(DATAURLBASE)/CBFlib_$(VERSION)_Data_Files_Output.tar.gz
DATAURLS = $(DATAURLBASE)/CBFlib_$(VERSION)_Data_Files_Output_Sigs_Only.tar.gz
#
# Include directories
#
INCLUDES = -I$(INCLUDE) -I$(SRC)
######################################################################
# You should not need to make modifications below this line #
######################################################################
#
# Suffixes of files to be used or built
#
.SUFFIXES: .c .o .f90 .m4
.m4.f90:
m4 -P $(M4FLAGS) $< > $@
ifneq ($(F90C),)
.f90.o:
$(F90C) $(F90FLAGS) -c $< -o $@
endif
#
# Common dependencies
#
COMMONDEP = Makefile
#
# Source files
#
SOURCE = $(SRC)/cbf.c \
$(SRC)/cbf_alloc.c \
$(SRC)/cbf_ascii.c \
$(SRC)/cbf_binary.c \
$(SRC)/cbf_byte_offset.c \
$(SRC)/cbf_canonical.c \
$(SRC)/cbf_codes.c \
$(SRC)/cbf_compress.c \
$(SRC)/cbf_context.c \
$(SRC)/cbf_file.c \
$(SRC)/cbf_lex.c \
$(SRC)/cbf_packed.c \
$(SRC)/cbf_predictor.c \
$(SRC)/cbf_read_binary.c \
$(SRC)/cbf_read_mime.c \
$(SRC)/cbf_simple.c \
$(SRC)/cbf_string.c \
$(SRC)/cbf_stx.c \
$(SRC)/cbf_tree.c \
$(SRC)/cbf_uncompressed.c \
$(SRC)/cbf_write.c \
$(SRC)/cbf_write_binary.c \
$(SRC)/md5c.c
F90SOURCE = $(SRC)/fcb_atol_wcnt.f90 \
$(SRC)/fcb_ci_strncmparr.f90 \
$(SRC)/fcb_exit_binary.f90 \
$(SRC)/fcb_nblen_array.f90 \
$(SRC)/fcb_next_binary.f90 \
$(SRC)/fcb_open_cifin.f90 \
$(SRC)/fcb_packed.f90 \
$(SRC)/fcb_read_bits.f90 \
$(SRC)/fcb_read_byte.f90 \
$(SRC)/fcb_read_image.f90 \
$(SRC)/fcb_read_line.f90 \
$(SRC)/fcb_read_xds_i2.f90 \
$(SRC)/fcb_skip_whitespace.f90 \
$(EXAMPLES)/test_fcb_read_image.f90 \
$(EXAMPLES)/test_xds_binary.f90
#
# Header files
#
HEADERS = $(INCLUDE)/cbf.h \
$(INCLUDE)/cbf_alloc.h \
$(INCLUDE)/cbf_ascii.h \
$(INCLUDE)/cbf_binary.h \
$(INCLUDE)/cbf_byte_offset.h \
$(INCLUDE)/cbf_canonical.h \
$(INCLUDE)/cbf_codes.h \
$(INCLUDE)/cbf_compress.h \
$(INCLUDE)/cbf_context.h \
$(INCLUDE)/cbf_file.h \
$(INCLUDE)/cbf_lex.h \
$(INCLUDE)/cbf_packed.h \
$(INCLUDE)/cbf_predictor.h \
$(INCLUDE)/cbf_read_binary.h \
$(INCLUDE)/cbf_read_mime.h \
$(INCLUDE)/cbf_simple.h \
$(INCLUDE)/cbf_string.h \
$(INCLUDE)/cbf_stx.h \
$(INCLUDE)/cbf_tree.h \
$(INCLUDE)/cbf_uncompressed.h \
$(INCLUDE)/cbf_write.h \
$(INCLUDE)/cbf_write_binary.h \
$(INCLUDE)/global.h \
$(INCLUDE)/md5.h
#
# m4 macro files
#
M4FILES = $(M4)/fcblib_defines.m4 \
$(M4)/fcb_exit_binary.m4 \
$(M4)/fcb_next_binary.m4 \
$(M4)/fcb_open_cifin.m4 \
$(M4)/fcb_packed.m4 \
$(M4)/fcb_read_bits.m4 \
$(M4)/fcb_read_image.m4 \
$(M4)/fcb_read_xds_i2.m4 \
$(M4)/test_fcb_read_image.m4 \
$(M4)/test_xds_binary.m4
#
# Documentation files
#
DOCUMENTS = $(DOC)/CBFlib.html \
$(DOC)/CBFlib.txt \
$(DOC)/CBFlib_NOTICES.html \
$(DOC)/CBFlib_NOTICES.txt \
$(DOC)/ChangeLog \
$(DOC)/ChangeLog.html \
$(DOC)/MANIFEST \
$(DOC)/gpl.txt $(DOC)/lgpl.txt
#
# HTML Graphics files
#
JPEGS = $(GRAPHICS)/CBFbackground.jpg \
$(GRAPHICS)/CBFbig.jpg \
$(GRAPHICS)/CBFbutton.jpg \
$(GRAPHICS)/cbflibbackground.jpg \
$(GRAPHICS)/cbflibbig.jpg \
$(GRAPHICS)/cbflibbutton.jpg \
$(GRAPHICS)/cifhome.jpg \
$(GRAPHICS)/iucrhome.jpg \
$(GRAPHICS)/noticeButton.jpg
#
# Default: instructions
#
default:
@echo ' '
@echo '***************************************************************'
@echo ' '
@echo ' PLEASE READ README and doc/CBFlib_NOTICES.txt'
@echo ' '
@echo ' Before making the CBF library and example programs, check'
@echo ' that the C compiler name and flags are correct:'
@echo ' '
@echo ' The current values are:'
@echo ' '
@echo ' $(CC) $(CFLAGS)'
@echo ' '
@echo ' Before installing the CBF library and example programs, check'
@echo ' that the install directory is correct:'
@echo ' '
@echo ' The current value :'
@echo ' '
@echo ' $(INSTALLDIR) '
@echo ' '
@echo ' To compile the CBF library and example programs type:'
@echo ' '
@echo ' make clean'
@echo ' make all'
@echo ' '
@echo ' To run a set of tests type:'
@echo ' '
@echo ' make tests'
@echo ' '
@echo ' The tests assume that several data files are in the directories'
@echo ' $(DATADIRI) and $(DATADIRO)'
@echo ' '
@echo ' Alternatively tests can be run comaring MD5 signatures only by'
@echo ' '
@echo ' make tests_sigs_only'
@echo ' '
@echo ' These signature only tests save space and download time by'
@echo ' assuming that input data files and the output signatures'
@echo ' are in the directories'
@echo ' $(DATADIRI) and $(DATADIRS)'
@echo ' '
@echo ' These directory can be obtained from'
@echo ' '
@echo ' $(DATAURLI) '
@echo ' $(DATAURLO) '
@echo ' $(DATAURLS) '
@echo ' '
@echo ' To clean up the directories type:'
@echo ' '
@echo ' make clean'
@echo ' '
@echo ' To install the library and binaries type:'
@echo ' '
@echo ' make install'
@echo ' '
@echo '***************************************************************'
@echo ' '
#
# Compile the library and examples
#
all: $(LIB) $(BIN) $(SOURCE) $(F90SOURCE) $(HEADERS) symlinksdone \
$(LIB)/libcbf.a \
$(LIB)/libfcb.a \
$(LIB)/libimg.a \
$(BIN)/adscimg2cbf \
$(BIN)/cbf2adscimg \
$(BIN)/convert_image \
$(BIN)/convert_minicbf \
$(BIN)/makecbf \
$(BIN)/img2cif \
$(BIN)/adscimg2cbf \
$(BIN)/cif2cbf \
$(BIN)/testcell \
$(BIN)/cif2c \
$(BIN)/testreals \
$(BIN)/testflat \
$(BIN)/testflatpacked \
$(BIN)/test_xds_binary \
$(BIN)/test_fcb_read_image
Makefiles: Makefile \
Makefile_LINUX \
Makefile_LINUX_gcc42 \
Makefile_OSX \
Makefile_OSX_gcc42 \
Makefile_AIX \
Makefile_MINGW \
Makefile_IRIX_gcc
Makefile_LINUX: $(M4)/Makefile.m4
-cp Makefile_LINUX Makefile_LINUX_old
m4 -P -Dcbf_system=LINUX $(M4)/Makefile.m4 > Makefile_LINUX
Makefile_LINUX_gcc42: $(M4)/Makefile.m4
-cp Makefile_LINUX_gcc42 Makefile_LINUX_gcc42_old
m4 -P -Dcbf_system=LINUX_gcc42 $(M4)/Makefile.m4 > Makefile_LINUX_gcc42
Makefile_OSX: $(M4)/Makefile.m4
-cp Makefile_OSX Makefile_OSX_old
m4 -P -Dcbf_system=OSX $(M4)/Makefile.m4 > Makefile_OSX
Makefile_OSX_gcc42: $(M4)/Makefile.m4
-cp Makefile_OSX_gcc42 Makefile_OSX_gcc42_old
m4 -P -Dcbf_system=OSX_gcc42 $(M4)/Makefile.m4 > Makefile_OSX_gcc42
Makefile_AIX: $(M4)/Makefile.m4
-cp Makefile_AIX Makefile_AIX_old
m4 -P -Dcbf_system=AIX $(M4)/Makefile.m4 > Makefile_AIX
Makefile_MINGW: $(M4)/Makefile.m4
-cp Makefile_MINGW Makefile_MINGW_old
m4 -P -Dcbf_system=MINGW $(M4)/Makefile.m4 > Makefile_MINGW
Makefile_IRIX_gcc: $(M4)/Makefile.m4
-cp Makefile_IRIX_gcc Makefile_IRIX_gcc_old
m4 -P -Dcbf_system=IRIX_gcc $(M4)/Makefile.m4 > Makefile_IRIX_gcc
Makefile: $(M4)/Makefile.m4
-cp Makefile Makefile_old
m4 -P -Dcbf_system=default $(M4)/Makefile.m4 > Makefile
symlinksdone:
./.symlinks $(SLFLAGS)
touch symlinksdone
install: all $(INSTALLDIR) $(INSTALLDIR)/lib $(INSTALLDIR)/bin \
$(INSTALLDIR)/include $(INSTALLDIR)/include/cbflib
-cp $(INSTALLDIR)/lib/libcbf.a $(INSTALLDIR)/lib/libcbf_old.a
cp $(LIB)/libcbf.a $(INSTALLDIR)/lib/libcbf.a
-cp $(INSTALLDIR)/lib/libimg.a $(INSTALLDIR)/lib/libimg_old.a
cp $(LIB)/libimg.a $(INSTALLDIR)/lib/libimg.a
-cp $(INSTALLDIR)/bin/adscimg2cbf $(INSTALLDIR)/bin/adscimg2cbf_old
cp $(BIN)/adscimg2cbf $(INSTALLDIR)/bin/adscimg2cbf
-cp $(INSTALLDIR)/bin/cbf2adscimg $(INSTALLDIR)/bin/cbf2adscimg_old
cp $(BIN)/cbf2adscimg $(INSTALLDIR)/bin/cbf2adscimg
-cp $(INSTALLDIR)/bin/convert_image $(INSTALLDIR)/bin/convert_image_old
cp $(BIN)/convert_image $(INSTALLDIR)/bin/convert_image
-cp $(INSTALLDIR)/bin/convert_minicbf $(INSTALLDIR)/bin/convert_minicbf_old
cp $(BIN)/convert_minicbf $(INSTALLDIR)/bin/convert_minicbf
-cp $(INSTALLDIR)/bin/makecbf $(INSTALLDIR)/bin/makecbf_old
cp $(BIN)/makecbf $(INSTALLDIR)/bin/makecbf
-cp $(INSTALLDIR)/bin/img2cif $(INSTALLDIR)/bin/img2cif_old
cp $(BIN)/img2cif $(INSTALLDIR)/bin/img2cif
-cp $(INSTALLDIR)/bin/cif2cbf $(INSTALLDIR)/bin/cif2cbf_old
cp $(BIN)/cif2cbf $(INSTALLDIR)/bin/cif2cbf
-cp $(INSTALLDIR)/bin/cif2c $(INSTALLDIR)/bin/cif2c_old
cp $(BIN)/cif2c $(INSTALLDIR)/bin/cif2c
-cp $(INSTALLDIR)/bin/testreals $(INSTALLDIR)/bin/testreals_old
cp $(BIN)/testreals $(INSTALLDIR)/bin/testreals
-cp $(INSTALLDIR)/bin/testflat $(INSTALLDIR)/bin/testflat_old
cp $(BIN)/testflat $(INSTALLDIR)/bin/testflat
-cp $(INSTALLDIR)/bin/testflatpacked $(INSTALLDIR)/bin/testflatpacked_old
cp $(BIN)/testflatpacked $(INSTALLDIR)/bin/testflatpacked
-rm -rf $(INSTALLDIR)/include/cbflib_old
-cp -r $(INSTALLDIR)/include/cbflib $(INSTALLDIR)/include/cbflib_old
-rm -rf $(INSTALLDIR)/include/cbflib
cp -r $(INCLUDE) $(INSTALLDIR)/include/cbflib
chmod 644 $(INSTALLDIR)/lib/libcbf.a
chmod 755 $(INSTALLDIR)/bin/convert_image
chmod 755 $(INSTALLDIR)/bin/convert_minicbf
chmod 755 $(INSTALLDIR)/bin/makecbf
chmod 755 $(INSTALLDIR)/bin/img2cif
chmod 755 $(INSTALLDIR)/bin/cif2cbf
chmod 755 $(INSTALLDIR)/bin/cif2c
chmod 755 $(INSTALLDIR)/bin/testreals
chmod 755 $(INSTALLDIR)/bin/testflat
chmod 755 $(INSTALLDIR)/bin/testflatpacked
chmod -R 644 $(INSTALLDIR)/include/cbflib
#
# Changes if a local gnu getopt is used
#
ifneq ($(GETOPT),SYSTEM)
CFLAGS += -DGNUGETOPT
GOPTLIB = $(LIB)/getopt.o
GOPTINC = $(INCLUDE)/getopt.h
GOPTCLEAN = $(GETOPT)_clean
GOPTBUILD = $(GETOPT)_build
GOPTURL = http://arcib.dowling.edu/software/getopt/downloads/$(GETOPT).tar.gz
#
# getopt package
#
$(GETOPT):
$(DOWNLOAD) $(GOPTURL)
tar -xvf $(GETOPT).tar.gz
-rm $(GETOPT).tar.gz
#
# build getopt
#
$(LIB)/getopt.o: $(GOPTBUILD)
(cd $(GETOPT); cp gnu/getopt.o ../$(LIB) )
$(INCLUDE)/getopt.h: $(GOPTBUILD)
(cd $(GETOPT); cp gnu/getopt.h ../$(INCLUDE) )
$(GOPTBUILD): $(GETOPT)
(cd $(GETOPT); sed "1,\$$s/WITHOUT_GETTEXT=0/WITHOUT_GETTEXT=1/g" Makefile \
| sed "1,\$$s/WITH_GETTEXT/WITHOUT_GETTEXT/g"> Makefile_CBF; \
make -f Makefile_CBF GNUGETOPT=1 LIBCGETOPT=0 gnu/getopt.o; \
touch ../$(GOPTBUILD))
$(GOPTCLEAN):
-(cd $(GETOPT); make clean)
-rm $(GETOPT)/gnu/getopt.o
-rm $(GOPTBUILD)
endif
#
# Directories
#
$(INSTALLDIR):
mkdir -p $(INSTALLDIR)
$(INSTALLDIR)/lib: $(INSTALLDIR)
mkdir -p $(INSTALLDIR)/lib
$(INSTALLDIR)/bin: $(INSTALLDIR)
mkdir -p $(INSTALLDIR)/bin
$(INSTALLDIR)/include: $(INSTALLDIR)
mkdir -p $(INSTALLDIR)/include
$(INSTALLDIR)/include/cbflib: $(INSTALLDIR)/include
mkdir -p $(INSTALLDIR)/include/cbflib
$(LIB):
mkdir $(LIB)
$(BIN):
mkdir $(BIN)
#
# Parser
#
$(SRC)/cbf_stx.c: $(SRC)/cbf.stx.y
bison $(SRC)/cbf.stx.y -o $(SRC)/cbf.stx.tab.c -d
mv $(SRC)/cbf.stx.tab.c $(SRC)/cbf_stx.c
mv $(SRC)/cbf.stx.tab.h $(INCLUDE)/cbf_stx.h
#
# CBF library
#
$(LIB)/libcbf.a: $(SOURCE) $(HEADERS) $(COMMONDEP)
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) -c $(SOURCE)
$(AR) cr $@ *.o
rm *.o
ifneq ($(RANLIB),)
$(RANLIB) $@
endif
#
# IMG library
#
$(LIB)/libimg.a: $(EXAMPLES)/img.c $(HEADERS) $(COMMONDEP)
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) -c $(EXAMPLES)/img.c
$(AR) cr $@ *.o
rm *.o
ifneq ($(RANLIB),)
$(RANLIB) $@
endif
#
# CBF and IMG libraries
#
CBF_IMG_LIBS: $(LIB)/libcbf.a $(LIB)/libimg.a
#
# FCB library
#
$(LIB)/libfcb.a: $(F90SOURCE) $(COMMONDEP)
ifneq ($(F90C),)
$(F90C) $(F90FLAGS) -c $(F90SOURCE)
$(AR) cr $@ *.o
rm *.o
ifneq ($(RANLIB),)
$(RANLIB) $@
endif
else
echo "Define F90C to build $(LIB)libfcb.a"
endif
#
# Python bindings
#
$(PYCBF)/_pycbf.so: $(PYCBF)
(cd $(PYCBF); python setup.py build; cp build/lib.*/_pycbf.so .)
$(LIB)/_pycbf.so: $(PYCBF)/_pycbf.so
cp $(PYCBF)/_pycbf.so $(LIB)/_pycbf.so
#
# F90SOURCE
#
$(SRC)/fcb_exit_binary.f90: $(M4)/fcb_exit_binary.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) fcb_exit_binary.m4) > $(SRC)/fcb_exit_binary.f90
$(SRC)/fcb_next_binary.f90: $(M4)/fcb_next_binary.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) fcb_next_binary.m4) > $(SRC)/fcb_next_binary.f90
$(SRC)/fcb_open_cifin.f90: $(M4)/fcb_open_cifin.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) fcb_open_cifin.m4) > $(SRC)/fcb_open_cifin.f90
$(SRC)/fcb_packed.f90: $(M4)/fcb_packed.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) fcb_packed.m4) > $(SRC)/fcb_packed.f90
$(SRC)/fcb_read_bits.f90: $(M4)/fcb_read_bits.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) fcb_read_bits.m4) > $(SRC)/fcb_read_bits.f90
$(SRC)/fcb_read_image.f90: $(M4)/fcb_read_image.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) fcb_read_image.m4) > $(SRC)/fcb_read_image.f90
$(SRC)/fcb_read_xds_i2.f90: $(M4)/fcb_read_xds_i2.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) fcb_read_xds_i2.m4) > $(SRC)/fcb_read_xds_i2.f90
$(EXAMPLES)/test_fcb_read_image.f90: $(M4)/test_fcb_read_image.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) test_fcb_read_image.m4) > $(EXAMPLES)/test_fcb_read_image.f90
$(EXAMPLES)/test_xds_binary.f90: $(M4)/test_xds_binary.m4 $(M4)/fcblib_defines.m4
(cd $(M4); m4 -P $(M4FLAGS) test_xds_binary.m4) > $(EXAMPLES)/test_xds_binary.f90
#
# convert_image example program
#
$(BIN)/convert_image: $(LIB)/libcbf.a $(EXAMPLES)/convert_image.c $(EXAMPLES)/img.c \
$(GOPTLIB) $(GOPTINC)
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/convert_image.c $(EXAMPLES)/img.c $(GOPTLIB) -L$(LIB) \
-lcbf -lm -o $@
#
# convert_minicbf example program
#
$(BIN)/convert_minicbf: $(LIB)/libcbf.a $(EXAMPLES)/convert_minicbf.c \
$(GOPTLIB) $(GOPTINC)
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/convert_minicbf.c $(GOPTLIB) -L$(LIB) \
-lcbf -lm -o $@
#
# makecbf example program
#
$(BIN)/makecbf: $(LIB)/libcbf.a $(EXAMPLES)/makecbf.c $(LIB)/libimg.a
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/makecbf.c -L$(LIB) \
-lcbf -lm -limg -o $@
#
# adscimg2cbf example program
#
$(BIN)/adscimg2cbf: $(LIB)/libcbf.a $(EXAMPLES)/adscimg2cbf.c $(EXAMPLES)/adscimg2cbf_sub.c
$(CC) $(CFLAGS) -D_SVID_SOURCE $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/adscimg2cbf.c $(EXAMPLES)/adscimg2cbf_sub.c -L$(LIB) \
-lcbf -lm -o $@
#
# cbf2adscimg example program
#
$(BIN)/cbf2adscimg: $(LIB)/libcbf.a $(EXAMPLES)/cbf2adscimg.c $(EXAMPLES)/cbf2adscimg_sub.c
$(CC) $(CFLAGS) -D_SVID_SOURCE $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/cbf2adscimg.c $(EXAMPLES)/cbf2adscimg_sub.c -L$(LIB) \
-lcbf -lm -o $@
#
# img2cif example program
#
$(BIN)/img2cif: $(LIB)/libcbf.a $(EXAMPLES)/img2cif.c $(LIB)/libimg.a \
$(GOPTLIB) $(GOTPINC)
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/img2cif.c $(GOPTLIB) -L$(LIB) \
-lcbf -lm -limg -o $@
#
# cif2cbf example program
#
$(BIN)/cif2cbf: $(LIB)/libcbf.a $(EXAMPLES)/cif2cbf.c $(LIB)/libimg.a \
$(GOPTLIB) $(GOPTINC)
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/cif2cbf.c $(GOPTLIB) -L$(LIB) \
-lcbf -lm -limg -o $@
#
# testcell example program
#
$(BIN)/testcell: $(LIB)/libcbf.a $(EXAMPLES)/testcell.C
$(C++) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/testcell.C -L$(LIB) \
-lcbf -lm -o $@
#
# cif2c example program
#
$(BIN)/cif2c: $(LIB)/libcbf.a $(EXAMPLES)/cif2c.c
$(C++) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/cif2c.c -L$(LIB) \
-lcbf -lm -o $@
#
# sauter_test example program
#
$(BIN)/sauter_test: $(LIB)/libcbf.a $(EXAMPLES)/sauter_test.C
$(C++) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/sauter_test.C -L$(LIB) \
-lcbf -lm -o $@
#
# testreals example program
#
$(BIN)/testreals: $(LIB)/libcbf.a $(EXAMPLES)/testreals.c
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/testreals.c -L$(LIB) \
-lcbf -lm -o $@
#
# testflat example program
#
$(BIN)/testflat: $(LIB)/libcbf.a $(EXAMPLES)/testflat.c
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/testflat.c -L$(LIB) \
-lcbf -lm -o $@
#
# testflatpacked example program
#
$(BIN)/testflatpacked: $(LIB)/libcbf.a $(EXAMPLES)/testflatpacked.c
$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
$(EXAMPLES)/testflatpacked.c -L$(LIB) \
-lcbf -lm -o $@
ifneq ($(F90C),)
#
# test_xds_binary example program
#
$(BIN)/test_xds_binary: $(LIB)/libfcb.a $(EXAMPLES)/test_xds_binary.f90
$(F90C) $(F90FLAGS) $(F90LDFLAGS) $(EXAMPLES)/test_xds_binary.f90 \
-L$(LIB) -lfcb -o $@
#
# test_fcb_read_image example program
#
$(BIN)/test_fcb_read_image: $(LIB)/libfcb.a $(EXAMPLES)/test_fcb_read_image.f90
$(F90C) $(F90FLAGS) $(F90LDFLAGS) $(EXAMPLES)/test_fcb_read_image.f90 \
-L$(LIB) -lfcb -o $@
endif
#
# Data files for tests
#
$(DATADIRI):
(cd ..; $(DOWNLOAD) $(DATAURLI))
(cd ..; tar -xvf CBFlib_$(VERSION)_Data_Files_Input.tar.gz)
-(cd ..; rm CBFlib_$(VERSION)_Data_Files_Input.tar.gz)
$(DATADIRO):
(cd ..; $(DOWNLOAD) $(DATAURLO))
(cd ..; tar -xvf CBFlib_$(VERSION)_Data_Files_Output.tar.gz)
-(cd ..; rm CBFlib_$(VERSION)_Data_Files_Output.tar.gz)
$(DATADIRS):
(cd ..; $(DOWNLOAD) $(DATAURLS))
(cd ..; tar -xvf CBFlib_$(VERSION)_Data_Files_Output_Sigs_Only.tar.gz)
-(cd ..; rm CBFlib_$(VERSION)_Data_Files_Output_Sigs_Only.tar.gz)
# Input Data Files
TESTINPUT_BASIC = example.mar2300
DATADIRI_INPUT_BASIC = $(DATADIRI)/example.mar2300$(CEXT)
TESTINPUT_EXTRA = 9ins.cif mb_LP_1_001.img insulin_pilatus6m.cbf testrealin.cbf \
testflatin.cbf testflatpackedin.cbf
DATADIRI_INPUT_EXTRA = $(DATADIRI)/9ins.cif$(CEXT) $(DATADIRI)/mb_LP_1_001.img$(CEXT) \
$(DATADIRI)/insulin_pilatus6m.cbf$(CEXT) $(DATADIRI)/testrealin.cbf$(CEXT) \
$(DATADIRI)/testflatin.cbf$(CEXT) $(DATADIRI)/testflatpackedin.cbf$(CEXT)
# Output Data Files
TESTOUTPUT = adscconverted_flat_orig.cbf \
adscconverted_orig.cbf converted_flat_orig.cbf converted_orig.cbf \
insulin_pilatus6mconverted_orig.cbf \
mb_LP_1_001_orig.cbf testcell_orig.prt \
test_xds_bin_testflatout_orig.out \
test_xds_bin_testflatpackedout_orig.out test_fcb_read_testflatout_orig.out \
test_fcb_read_testflatpackedout_orig.out
NEWTESTOUTPUT = adscconverted_flat.cbf \
adscconverted.cbf converted_flat.cbf converted.cbf \
insulin_pilatus6mconverted.cbf \
mb_LP_1_001.cbf testcell.prt \
test_xds_bin_testflatout.out \
test_xds_bin_testflatpackedout.out test_fcb_read_testflatout.out \
test_fcb_read_testflatpackedout.out
DATADIRO_OUTPUT = $(DATADIRO)/adscconverted_flat_orig.cbf$(CEXT) \
$(DATADIRO)/adscconverted_orig.cbf$(CEXT) \
$(DATADIRO)/converted_flat_orig.cbf$(CEXT) \
$(DATADIRO)/converted_orig.cbf$(CEXT) \
$(DATADIRO)/insulin_pilatus6mconverted_orig.cbf$(CEXT) \
$(DATADIRO)/mb_LP_1_001_orig.cbf$(CEXT) \
$(DATADIRO)/testcell_orig.prt$(CEXT) \
$(DATADIRO)/test_xds_bin_testflatout_orig.out$(CEXT) \
$(DATADIRO)/test_xds_bin_testflatpackedout_orig.out$(CEXT) \
$(DATADIRO)/test_fcb_read_testflatout_orig.out$(CEXT) \
$(DATADIRO)/test_fcb_read_testflatpackedout_orig.out$(CEXT)
DATADIRO_OUTPUT_SIGNATURES = $(DATADIRO)/adscconverted_flat_orig.cbf$(SEXT) \
$(DATADIRO)/adscconverted_orig.cbf$(SEXT) \
$(DATADIRO)/converted_flat_orig.cbf$(SEXT) \
$(DATADIRO)/converted_orig.cbf$(SEXT) \
$(DATADIRO)/insulin_pilatus6mconverted_orig.cbf$(SEXT) \
$(DATADIRO)/mb_LP_1_001_orig.cbf$(SEXT) \
$(DATADIRO)/testcell_orig.prt$(SEXT) \
$(DATADIRO)/test_xds_bin_testflatout_orig.out$(SEXT) \
$(DATADIRO)/test_xds_bin_testflatpackedout_orig.out$(SEXT) \
$(DATADIRO)/test_fcb_read_testflatout_orig.out$(SEXT) \
$(DATADIRO)/test_fcb_read_testflatpackedout_orig.out$(SEXT)
# Output Data File Signatures
TESTOUTPUTSIGS = adscconverted_flat_orig.cbf$(SEXT) \
adscconverted_orig.cbf$(SEXT) converted_flat_orig.cbf$(SEXT) converted_orig.cbf$(SEXT) \
insulin_pilatus6mconverted_orig.cbf$(SEXT) \
mb_LP_1_001_orig.cbf$(SEXT) testcell_orig.prt$(SEXT) \
test_xds_bin_testflatout_orig.out$(SEXT) \
test_xds_bin_testflatpackedout_orig.out$(SEXT) test_fcb_read_testflatout_orig.out$(SEXT) \
test_fcb_read_testflatpackedout_orig.out$(SEXT)
DATADIRS_OUTPUT_SIGNATURES = $(DATADIRS)/adscconverted_flat_orig.cbf$(SEXT) \
$(DATADIRS)/adscconverted_orig.cbf$(SEXT) \
$(DATADIRS)/converted_flat_orig.cbf$(SEXT) \
$(DATADIRS)/converted_orig.cbf$(SEXT) \
$(DATADIRS)/insulin_pilatus6mconverted_orig.cbf$(SEXT) \
$(DATADIRS)/mb_LP_1_001_orig.cbf$(SEXT) \
$(DATADIRS)/testcell_orig.prt$(SEXT) \
$(DATADIRS)/test_xds_bin_testflatout_orig.out$(SEXT) \
$(DATADIRS)/test_xds_bin_testflatpackedout_orig.out$(SEXT) \
$(DATADIRS)/test_fcb_read_testflatout_orig.out$(SEXT) \
$(DATADIRS)/test_fcb_read_testflatpackedout_orig.out$(SEXT)
# Fetch Input Data Files
$(TESTINPUT_BASIC): $(DATADIRI) $(DATADIRI_INPUT_BASIC)
$(DECOMPRESS) < $(DATADIRI)/$@$(CEXT) > $@
cp $(DATADIRI)/$@$(SEXT) $@$(SEXT)
-$(SIGNATURE) < $@ | diff - $@$(SEXT)
$(TESTINPUT_EXTRA): $(DATADIRI) $(DATADIRI_INPUT_EXTRA)
$(DECOMPRESS) < $(DATADIRI)/$@$(CEXT) > $@
cp $(DATADIRI)/$@$(SEXT) $@$(SEXT)
-$(SIGNATURE) < $@ | diff - $@$(SEXT)
# Fetch Output Data Files and Signatures
$(TESTOUTPUT): $(DATADIRO) $(DATADIRO_OUTPUT) $(DATADIRO_OUTPUT_SIGNATURES)
$(DECOMPRESS) < $(DATADIRO)/$@$(CEXT) > $@
cp $(DATADIRO)/$@$(SEXT) $@$(SEXT)
-$(SIGNATURE) < $@ | diff - $@$(SEXT)
# Fetch Output Data File Signatures
$(TESTOUTPUTSIGS): $(DATADIRS) $(DATADIRS_OUTPUT_SIGNATURES)
cp $(DATADIRS)/$@ $@
#
# Tests
#
tests: $(LIB) $(BIN) symlinksdone basic extra
tests_sigs_only: $(LIB) $(BIN) symlinksdone basic extra_sigs_only
restore_output: $(NEWTESTOUTPUT) $(DATADIRO)
$(SIGNATURE) < adscconverted_flat.cbf > $(DATADIRO)/adscconverted_flat_orig.cbf$(SEXT)
$(SIGNATURE) < adscconverted.cbf > $(DATADIRO)/adscconverted_orig.cbf$(SEXT)
$(SIGNATURE) < converted_flat.cbf > $(DATADIRO)/converted_flat_orig.cbf$(SEXT)
$(SIGNATURE) < converted.cbf > $(DATADIRO)/converted_orig.cbf$(SEXT)
$(SIGNATURE) < insulin_pilatus6mconverted.cbf > $(DATADIRO)/insulin_pilatus6mconverted_orig.cbf$(SEXT)
$(SIGNATURE) < mb_LP_1_001.cbf$ > $(DATADIRO)/mb_LP_1_001_orig.cbf$(SEXT)
$(SIGNATURE) < testcell.prt > $(DATADIRO)/testcell_orig.prt$(SEXT)
$(SIGNATURE) < test_xds_bin_testflatout.out > $(DATADIRO)/test_xds_bin_testflatout_orig.out$(SEXT)
$(SIGNATURE) < test_xds_bin_testflatpackedout.out > $(DATADIRO)/test_xds_bin_testflatpackedout_orig.out$(SEXT)
$(SIGNATURE) < test_fcb_read_testflatout.out > $(DATADIRO)/test_fcb_read_testflatout_orig.out$(SEXT)
$(SIGNATURE) < test_fcb_read_testflatpackedout.out > $(DATADIRO)/test_fcb_read_testflatpackedout_orig.out$(SEXT)
$(COMPRESS) < adscconverted_flat.cbf > $(DATADIRO)/adscconverted_flat_orig.cbf$(CEXT)
$(COMPRESS) < adscconverted.cbf > $(DATADIRO)/adscconverted_orig.cbf$(CEXT)
$(COMPRESS) < converted_flat.cbf > $(DATADIRO)/converted_flat_orig.cbf$(CEXT)
$(COMPRESS) < converted.cbf > $(DATADIRO)/converted_orig.cbf$(CEXT)
$(COMPRESS) < insulin_pilatus6mconverted.cbf > $(DATADIRO)/insulin_pilatus6mconverted_orig.cbf$(CEXT)
$(COMPRESS) < mb_LP_1_001.cbf$ > $(DATADIRO)/mb_LP_1_001_orig.cbf$(CEXT)
$(COMPRESS) < testcell.prt > $(DATADIRO)/testcell_orig.prt$(CEXT)
$(COMPRESS) < test_xds_bin_testflatout.out > $(DATADIRO)/test_xds_bin_testflatout_orig.out$(CEXT)
$(COMPRESS) < test_xds_bin_testflatpackedout.out > $(DATADIRO)/test_xds_bin_testflatpackedout_orig.out$(CEXT)
$(COMPRESS) < test_fcb_read_testflatout.out > $(DATADIRO)/test_fcb_read_testflatout_orig.out$(CEXT)
$(COMPRESS) < test_fcb_read_testflatpackedout.out > $(DATADIRO)/test_fcb_read_testflatpackedout_orig.out$(CEXT)
restore_sigs_only: $(NEWTESTOUTPUT) $(DATADIRS)
$(SIGNATURE) < adscconverted_flat.cbf > $(DATADIRS)/adscconverted_flat_orig.cbf$(SEXT)
$(SIGNATURE) < adscconverted.cbf > $(DATADIRS)/adscconverted_orig.cbf$(SEXT)
$(SIGNATURE) < converted_flat.cbf > $(DATADIRS)/converted_flat_orig.cbf$(SEXT)
$(SIGNATURE) < converted.cbf > $(DATADIRS)/converted_orig.cbf$(SEXT)
$(SIGNATURE) < insulin_pilatus6mconverted.cbf > $(DATADIRS)/insulin_pilatus6mconverted_orig.cbf$(SEXT)
$(SIGNATURE) < mb_LP_1_001.cbf$ > $(DATADIRS)/mb_LP_1_001_orig.cbf$(SEXT)
$(SIGNATURE) < testcell.prt > $(DATADIRS)/testcell_orig.prt$(SEXT)
$(SIGNATURE) < test_xds_bin_testflatout.out > $(DATADIRS)/test_xds_bin_testflatout_orig.out$(SEXT)
$(SIGNATURE) < test_xds_bin_testflatpackedout.out > $(DATADIRS)/test_xds_bin_testflatpackedout_orig.out$(SEXT)
$(SIGNATURE) < test_fcb_read_testflatout.out > $(DATADIRS)/test_fcb_read_testflatout_orig.out$(SEXT)
$(SIGNATURE) < test_fcb_read_testflatpackedout.out > $(DATADIRS)/test_fcb_read_testflatpackedout_orig.out$(SEXT)
restore_signatures: restore_output restore_sigs_only
#
# Basic Tests
#
basic: $(BIN)/makecbf $(BIN)/img2cif $(BIN)/cif2cbf $(TESTINPUT_BASIC)
$(BIN)/makecbf example.mar2300 makecbf.cbf
$(BIN)/img2cif -c packed -m headers -d digest \
-e base64 example.mar2300 img2cif_packed.cif
$(BIN)/img2cif -c canonical -m headers -d digest \
-e base64 example.mar2300 img2cif_canonical.cif
$(BIN)/img2cif -c packed -m headers -d digest \
-e none example.mar2300 img2cif_packed.cbf
$(BIN)/img2cif -c canonical -m headers -d digest \
-e none example.mar2300 img2cif_canonical.cbf
$(BIN)/cif2cbf -e none -c packed \
img2cif_canonical.cif cif2cbf_packed.cbf
$(BIN)/cif2cbf -e none -c canonical \
img2cif_packed.cif cif2cbf_canonical.cbf
-cmp cif2cbf_packed.cbf makecbf.cbf
-cmp cif2cbf_packed.cbf img2cif_packed.cbf
-cmp cif2cbf_canonical.cbf img2cif_canonical.cbf
#
# Extra Tests
#
ifneq ($(F90C),)
extra: $(BIN)/convert_image $(BIN)/convert_minicbf $(BIN)/cif2cbf $(BIN)/testcell \
$(BIN)/testreals $(BIN)/testflat $(BIN)/testflatpacked \
$(BIN)/test_xds_binary $(BIN)/test_fcb_read_image $(BIN)/convert_minicbf \
$(BIN)/sauter_test $(BIN)/adscimg2cbf $(BIN)/cbf2adscimg \
basic $(TESTINPUT_EXTRA) $(TESTOUTPUT)
else
extra: $(BIN)/convert_image $(BIN)/convert_minicbf $(BIN)/cif2cbf $(BIN)/testcell \
$(BIN)/testreals $(BIN)/testflat $(BIN)/testflatpacked \
$(BIN)/convert_minicbf \
$(BIN)/sauter_test $(BIN)/adscimg2cbf $(BIN)/cbf2adscimg \
basic $(TESTINPUT_EXTRA) $(TESTOUTPUT)
endif
$(TIME) $(BIN)/cif2cbf -e hex -c none \
makecbf.cbf cif2cbf_ehcn.cif
$(TIME) $(BIN)/cif2cbf -e none -c packed \
cif2cbf_ehcn.cif cif2cbf_encp.cbf; rm cif2cbf_ehcn.cif
-cmp makecbf.cbf cif2cbf_encp.cbf
$(TIME) $(BIN)/cif2cbf -i 9ins.cif -o 9ins.cbf
-cmp 9ins.cif 9ins.cbf
$(TIME) $(BIN)/convert_image -F example.mar2300 converted_flat.cbf
-cmp converted_flat.cbf converted_flat_orig.cbf
$(TIME) $(BIN)/convert_image example.mar2300 converted.cbf
-cmp converted.cbf converted_orig.cbf
-$(TIME) $(BIN)/testcell < testcell.dat > testcell.prt
-cmp testcell.prt testcell_orig.prt
$(TIME) $(BIN)/convert_image -F -d adscquantum315 mb_LP_1_001.img adscconverted_flat.cbf
-cmp adscconverted_flat.cbf adscconverted_flat_orig.cbf
$(TIME) $(BIN)/convert_image -d adscquantum315 mb_LP_1_001.img adscconverted.cbf
-cmp adscconverted.cbf adscconverted_orig.cbf
$(TIME) $(BIN)/adscimg2cbf --cbf_packed,flat mb_LP_1_001.img
-cmp mb_LP_1_001.cbf mb_LP_1_001_orig.cbf
mv mb_LP_1_001.cbf nmb_LP_1_001.cbf
$(TIME) $(BIN)/cbf2adscimg nmb_LP_1_001.cbf
-cmp nmb_LP_1_001.img mb_LP_1_001.img
rm nmb_LP_1_001.cbf
rm nmb_LP_1_001.img
$(TIME) $(BIN)/convert_minicbf -d pilatus6m insulin_pilatus6m.cbf insulin_pilatus6mconverted.cbf
-cmp insulin_pilatus6mconverted.cbf insulin_pilatus6mconverted_orig.cbf
$(TIME) $(BIN)/testreals
-cmp testrealin.cbf testrealout.cbf
$(TIME) $(BIN)/testflat
-cmp testflatin.cbf testflatout.cbf
$(TIME) $(BIN)/testflatpacked
-cmp testflatpackedin.cbf testflatpackedout.cbf
ifneq ($(F90C),)
echo testflatout.cbf | $(TIME) $(BIN)/test_xds_binary > test_xds_bin_testflatout.out
-diff -b -c test_xds_bin_testflatout.out test_xds_bin_testflatout_orig.out
echo testflatpackedout.cbf | $(TIME) $(BIN)/test_xds_binary > test_xds_bin_testflatpackedout.out
-diff -b -c test_xds_bin_testflatpackedout.out test_xds_bin_testflatpackedout_orig.out
echo testflatout.cbf | $(TIME) $(BIN)/test_fcb_read_image > test_fcb_read_testflatout.out
-diff test_fcb_read_testflatout.out test_fcb_read_testflatout_orig.out
echo testflatpackedout.cbf | $(TIME) $(BIN)/test_fcb_read_image > test_fcb_read_testflatpackedout.out
-diff test_fcb_read_testflatpackedout.out test_fcb_read_testflatpackedout_orig.out
endif
$(TIME) $(BIN)/sauter_test
ifneq ($(F90C),)
extra_sigs_only: $(BIN)/convert_image $(BIN)/convert_minicbf $(BIN)/cif2cbf $(BIN)/testcell \
$(BIN)/testreals $(BIN)/testflat $(BIN)/testflatpacked \
$(BIN)/test_xds_binary $(BIN)/test_fcb_read_image $(BIN)/convert_minicbf \
$(BIN)/sauter_test $(BIN)/adscimg2cbf $(BIN)/cbf2adscimg \
basic $(TESTINPUT_EXTRA) $(TESTOUTPUTSIGS)
else
extra_sigs_only: $(BIN)/convert_image $(BIN)/convert_minicbf $(BIN)/cif2cbf $(BIN)/testcell \
$(BIN)/testreals $(BIN)/testflat $(BIN)/testflatpacked \
$(BIN)/convert_minicbf \
$(BIN)/sauter_test $(BIN)/adscimg2cbf\
basic $(TESTINPUT_EXTRA) $(TESTOUTPUTSIGS)
endif
$(TIME) $(BIN)/cif2cbf -e hex -c none \
makecbf.cbf cif2cbf_ehcn.cif
$(TIME) $(BIN)/cif2cbf -e none -c packed \
cif2cbf_ehcn.cif cif2cbf_encp.cbf; rm cif2cbf_ehcn.cif
-cmp makecbf.cbf cif2cbf_encp.cbf
$(TIME) $(BIN)/cif2cbf -i 9ins.cif -o 9ins.cbf
-cmp 9ins.cif 9ins.cbf
$(TIME) $(BIN)/convert_image -F example.mar2300 converted_flat.cbf
-$(SIGNATURE) < converted_flat.cbf | diff - converted_flat_orig.cbf$(SEXT); rm converted_flat.cbf
$(TIME) $(BIN)/convert_image example.mar2300 converted.cbf
-$(SIGNATURE) < converted.cbf | diff - converted_orig.cbf$(SEXT); rm converted.cbf
-$(TIME) $(BIN)/testcell < testcell.dat | \
$(SIGNATURE) | diff - testcell_orig.prt$(SEXT)
$(TIME) $(BIN)/convert_image -F -d adscquantum315 mb_LP_1_001.img adscconverted_flat.cbf
-$(SIGNATURE) < adscconverted_flat.cbf | diff - adscconverted_flat_orig.cbf$(SEXT)
$(TIME) $(BIN)/convert_image -d adscquantum315 mb_LP_1_001.img adscconverted.cbf
-$(SIGNATURE) < adscconverted.cbf | diff - adscconverted_orig.cbf$(SEXT); rm adscconverted.cbf
$(TIME) $(BIN)/adscimg2cbf --cbf_packed,flat mb_LP_1_001.img
-$(SIGNATURE) < mb_LP_1_001.cbf | diff - mb_LP_1_001_orig.cbf$(SEXT)
mv mb_LP_1_001.cbf nmb_LP_1_001.cbf
$(TIME) $(BIN)/cbf2adscimg nmb_LP_1_001.cbf
-cmp nmb_LP_1_001.img mb_LP_1_001.img
rm nmb_LP_1_001.cbf
rm nmb_LP_1_001.img
$(TIME) $(BIN)/convert_minicbf -d pilatus6m insulin_pilatus6m.cbf insulin_pilatus6mconverted.cbf
-$(SIGNATURE) < insulin_pilatus6mconverted.cbf | diff - insulin_pilatus6mconverted_orig.cbf$(SEXT); rm insulin_pilatus6mconverted.cbf
$(TIME) $(BIN)/testreals
-cmp testrealin.cbf testrealout.cbf
$(TIME) $(BIN)/testflat
-cmp testflatin.cbf testflatout.cbf
$(TIME) $(BIN)/testflatpacked
-cmp testflatpackedin.cbf testflatpackedout.cbf
ifneq ($(F90C),)
echo testflatout.cbf | $(TIME) $(BIN)/test_xds_binary | \
$(SIGNATURE) | diff - test_xds_bin_testflatout_orig.out$(SEXT)
echo testflatpackedout.cbf | $(TIME) $(BIN)/test_xds_binary | \
$(SIGNATURE) | diff - test_xds_bin_testflatpackedout_orig.out$(SEXT)
echo testflatout.cbf | $(TIME) $(BIN)/test_fcb_read_image | \
$(SIGNATURE) | diff - test_fcb_read_testflatout_orig.out$(SEXT)
echo testflatpackedout.cbf | $(TIME) $(BIN)/test_fcb_read_image | \
$(SIGNATURE) | diff - test_fcb_read_testflatpackedout_orig.out$(SEXT)
endif
$(TIME) $(BIN)/sauter_test
@-rm -f adscconverted_flat.cbf
@-rm -f $(TESTINPUT_BASIC) $(TESTINPUT_EXTRA) $(TESTOUTPUTSIGS)
@-rm -f cif2cbf_packed.cbf makecbf.cbf \
cif2cbf_packed.cbf img2cif_packed.cbf \
cif2cbf_canonical.cbf img2cif_canonical.cbf
@-rm -f testrealout.cbf testflatout.cbf testflatpackedout.cbf \
cif2cbf_encp.cbf img2cif_canonical.cif img2cif_packed.cif 9ins.cbf
pycbftests: $(PYCBF)/_pycbf.so
(cd $(PYCBF); python pycbf_test1.py)
(cd $(PYCBF); python pycbf_test2.py)
(cd $(PYCBF); python pycbf_test3.py)
#
# Remove all non-source files
#
empty:
@-rm -f $(LIB)/libcbf.a
@-rm -f $(LIB)/libfcb.a
@-rm -f $(LIB)/libimg.a
@-rm -f $(LIB)/_pycbf.so
@-rm -f $(PYCBF)/_pycbf.so
@-rm -f $(PYCBF)/build/*/_pycbf.so
@-rm -f $(PYCBF)/build/src/cbf_simple.o
@-rm -f $(PYCBF)/build/*/pycbf_wrap.o
@-rm -f $(LIB)/getopt.o
@-rm -f $(INCLUDE)/getopt.h
@-rm -f $(BIN)/adscimg2cbf
@-rm -f $(BIN)/cbf2adscimg
@-rm -f $(BIN)/makecbf
@-rm -f $(BIN)/img2cif
@-rm -f $(BIN)/cif2cbf
@-rm -f $(BIN)/convert_image
@-rm -f $(BIN)/convert_minicbf
@-rm -f $(BIN)/test_fcb_read_image
@-rm -f $(BIN)/test_xds_binary
@-rm -f $(BIN)/testcell
@-rm -f $(BIN)/cif2c
@-rm -f $(BIN)/testreals
@-rm -f $(BIN)/testflat
@-rm -f $(BIN)/testflatpacked
@-rm -f $(BIN)/sauter_test
@-rm -f makecbf.cbf
@-rm -f img2cif_packed.cif
@-rm -f img2cif_canonical.cif
@-rm -f img2cif_packed.cbf
@-rm -f img2cif_canonical.cbf
@-rm -f img2cif_raw.cbf
@-rm -f cif2cbf_packed.cbf
@-rm -f cif2cbf_canonical.cbf
@-rm -f converted.cbf
@-rm -f adscconverted.cbf
@-rm -f converted_flat.cbf
@-rm -f adscconverted_flat.cbf
@-rm -f adscconverted_flat_rev.cbf
@-rm -f mb_LP_1_001.cbf
@-rm -f cif2cbf_ehcn.cif
@-rm -f cif2cbf_encp.cbf
@-rm -f 9ins.cbf
@-rm -f 9ins.cif
@-rm -f testcell.prt
@-rm -f example.mar2300
@-rm -f converted_orig.cbf
@-rm -f adscconverted_orig.cbf
@-rm -f converted_flat_orig.cbf
@-rm -f adscconverted_flat_orig.cbf
@-rm -f adscconverted_flat_rev_orig.cbf
@-rm -f mb_LP_1_001_orig.cbf
@-rm -f insulin_pilatus6mconverted_orig.cbf
@-rm -f insulin_pilatus6mconverted.cbf
@-rm -f insulin_pilatus6m.cbf
@-rm -f testrealin.cbf
@-rm -f testrealout.cbf
@-rm -f testflatin.cbf
@-rm -f testflatout.cbf
@-rm -f testflatpackedin.cbf
@-rm -f testflatpackedout.cbf
@-rm -f test_fcb_read_testflatout.out
@-rm -f test_fcb_read_testflatpackedout.out
@-rm -f test_xds_bin_testflatpackedout.out
@-rm -f test_xds_bin_testflatout.out
@-rm -f test_fcb_read_testflatout_orig.out
@-rm -f test_fcb_read_testflatpackedout_orig.out
@-rm -f test_xds_bin_testflatpackedout_orig.out
@-rm -f test_xds_bin_testflatout_orig.out
@-rm -f mb_LP_1_001.img
@-rm -f 9ins.cif
@-rm -f testcell_orig.prt
@-rm -f $(SRC)/fcb_exit_binary.f90
@-rm -f $(SRC)/fcb_next_binary.f90
@-rm -f $(SRC)/fcb_open_cifin.f90
@-rm -f $(SRC)/fcb_packed.f90
@-rm -f $(SRC)/fcb_read_bits.f90
@-rm -f $(SRC)/fcb_read_image.f90
@-rm -f $(SRC)/fcb_read_xds_i2.f90
@-rm -f $(EXAMPLES)/test_fcb_read_image.f90
@-rm -f $(EXAMPLES)/test_xds_binary.f90
@-rm -f symlinksdone
@-rm -f $(TESTOUTPUT) *$(SEXT)
./.undosymlinks
#
# Remove temporary files
#
clean: $(GOPTCLEAN)
@-rm -f core
@-rm -f *.o
@-rm -f *.u
@-rm -f ./lib/getopt.o
#
# Restore to distribution state
#
distclean: clean empty
#
# Create a Tape Archive for distribution
#
tar: $(DOCUMENTS) $(SOURCE) $(SRC)/cbf.stx $(HEADERS) $(M4FILES)\
$(EXAMPLES) \
README.html README Makefile \
$(JPEGS)
-/bin/rm -f CBFlib.tar*
tar cvBf CBFlib.tar \
$(DOCUMENTS) $(SOURCE) $(SRC)/cbf.stx $(HEADERS) $(M4FILES)\
$(EXAMPLES) \
README.html README Makefile \
$(JPEGS)
gzip --best CBFlib.tar
|
