File: cbf_6M_template.cbf

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###CBF: VERSION 1.1
# Template for Diamond MX beamlines phase 1 - replacing what we currently
# have in ADSC, Rayonix and DECTRIS image headers with a standard syntax
# and description.
# 
# DECTRIS translation table follows...
# 
@ Exposure_time     _expt_
@ Exposure_period   _expp_
@ Start_angle       _omega_         3.987
@ Angle_increment   _d_omega_       0.123
@ Timestamp         _timestamp_
@ Count_cutoff      _cutoff_
@ Compression_type  _compress_
@ X_dimension       _wide_
@ Y_dimension       _high_
# 
# These items will be pre-populated in the template so need not be included:
# 
# Wavelength        
# Detector_distance 
# Beam_xy
# Alpha
# Kappa
# Phi
# Chi
# Oscillation_axis
# Pixel_size
# Detector
--- End of preamble
# This and all subsequent lines will appear in the header

_diffrn.id DLS_I03
_diffrn.crystal_id XTAL0001

# the following items will be fixed for the beamline

loop_
_diffrn_source.diffrn_id
_diffrn_source.source
_diffrn_source.type
 DLS_I03 synchrotron 'Diamond Light Source Beamline I03'

loop_
_diffrn_radiation.diffrn_id
_diffrn_radiation.wavelength_id
_diffrn_radiation.monochromator
_diffrn_radiation.polarizn_source_ratio
_diffrn_radiation.polarizn_source_norm
_diffrn_radiation.div_x_source
_diffrn_radiation.div_y_source
_diffrn_radiation.div_x_y_source
 DLS_I03 WAVELENGTH1 'Si 111' 0.8 0.0 0.08 0.01 0.00

# category DIFFRN_DETECTOR
loop_
_diffrn_detector.diffrn_id
_diffrn_detector.id
_diffrn_detector.type
_diffrn_detector.number_of_axes
 DLS_I03 ADSC_I03 'ADSC Quantum 315' 3

loop_
_diffrn_detector_axis.detector_id
_diffrn_detector_axis.axis_id
 ADSC_I03 DETECTOR_X
 ADSC_I03 DETECTOR_Y
 ADSC_I03 DETECTOR_Z

loop_
_diffrn_detector_element.id
_diffrn_detector_element.detector_id
 ELEMENT1 ADSC_I03

loop_
_diffrn_data_frame.id
_diffrn_data_frame.detector_element_id
_diffrn_data_frame.array_id
_diffrn_data_frame.binary_id
 FRAME1 ELEMENT1 ARRAY1 1

loop_
_diffrn_scan.id
_diffrn_scan.frame_id_start
_diffrn_scan.frame_id_end
_diffrn_scan.frames
 SCAN1 FRAME1 FRAME1 1

# at the moment we have only a single axis system in place - this will change 
# to a kappa at some point for I04 -> number_of_axes = 3
# GONIOMETER GONIOMETER_PHI
# GONIOMETER GONIOMETER_KAPPA

loop_
_diffrn_measurement.diffrn_id
_diffrn_measurement.id
_diffrn_measurement.number_of_axes
_diffrn_measurement.method
 DLS_I03 GONIOMETER 1 rotation

loop_
_diffrn_measurement_axis.measurement_id
_diffrn_measurement_axis.axis_id
 GONIOMETER GONIOMETER_OMEGA

# these items will be written by GDA on a scan-by-scan basis

loop_
_diffrn_radiation_wavelength.id
_diffrn_radiation_wavelength.wavelength
_diffrn_radiation_wavelength.wt
 WAVELENGTH1 0.97930 1.0

# these values should probably be updated from the results of postrefinement

loop_
_diffrn_scan_axis.scan_id
_diffrn_scan_axis.axis_id
_diffrn_scan_axis.angle_start
_diffrn_scan_axis.angle_range
_diffrn_scan_axis.angle_increment
_diffrn_scan_axis.displacement_start
_diffrn_scan_axis.displacement_range
_diffrn_scan_axis.displacement_increment
 SCAN1 GONIOMETER_OMEGA _omega_ 1.0 _d_omega_ 0.0 0.0 0.0
 SCAN1 DETECTOR_Z 0.0 0.0 0.0 -240.0 0.0 0.0
 SCAN1 DETECTOR_Y 0.0 0.0 0.0 0.6 0.0 0.0
 SCAN1 DETECTOR_X 0.0 0.0 0.0 -0.5 0.0 0.0

loop_
_diffrn_scan_frame.frame_id
_diffrn_scan_frame.frame_number
_diffrn_scan_frame.integration_time
_diffrn_scan_frame.exposure_time
_diffrn_scan_frame.scan_id
_diffrn_scan_frame.date
 FRAME1 1 _expt_ _expp_ SCAN1 _timestamp_

loop_
_diffrn_scan_frame_axis.frame_id
_diffrn_scan_frame_axis.axis_id
_diffrn_scan_frame_axis.angle
_diffrn_scan_frame_axis.displacement
 FRAME1 GONIOMETER_OMEGA 12.0 0.0
 FRAME1 DETECTOR_Z 0.0 -240.0
 FRAME1 DETECTOR_Y 0.0 0.6
 FRAME1 DETECTOR_X 0.0 -0.5

# this could also contain postrefined results

loop_
_axis.id
_axis.type
_axis.equipment
_axis.depends_on
_axis.vector[1] _axis.vector[2] _axis.vector[3]
_axis.offset[1] _axis.offset[2] _axis.offset[3]
 GONIOMETER_OMEGA rotation goniometer . 1 0 0 . . .
 SOURCE           general source . 0 0 1 . . .
 GRAVITY          general gravity . 0 -1 0 . . .
 DETECTOR_Z       translation detector . 0 0 1 0 0 0
 DETECTOR_Y       translation detector DETECTOR_Z 0 1 0 0 0 0
 DETECTOR_X       translation detector DETECTOR_Y 1 0 0 0 0 0
 ELEMENT_X        translation detector DETECTOR_X 1 0 0 157.2 157.2 0
 ELEMENT_Y        translation detector ELEMENT_X 0 1 0 0 0 0

loop_
_array_structure_list.array_id
_array_structure_list.index
_array_structure_list.dimension
_array_structure_list.precedence
_array_structure_list.direction
_array_structure_list.axis_set_id
 ARRAY1 1 _wide_ 1 increasing ELEMENT_X
 ARRAY1 2 _high_ 2 increasing ELEMENT_Y

loop_
_array_structure_list_axis.axis_set_id
_array_structure_list_axis.axis_id
_array_structure_list_axis.displacement
_array_structure_list_axis.displacement_increment
 ELEMENT_X ELEMENT_X 0.0512 0.1024
 ELEMENT_Y ELEMENT_Y 0.0512 0.1024

loop_
_array_element_size.array_id
_array_element_size.index
_array_element_size.size
 ARRAY1 1 102.4e-6
 ARRAY1 2 102.4e-6

loop_
_array_intensities.array_id
_array_intensities.binary_id
_array_intensities.linearity
_array_intensities.gain
_array_intensities.gain_esd
_array_intensities.overload
_array_intensities.undefined_value
 ARRAY1 1 linear 0.5 0.2 _cutoff_ 0

loop_
_array_structure.id
_array_structure.encoding_type
_array_structure.compression_type
_array_structure.byte_order
 ARRAY1 "signed 32-bit integer" _compress_ little_endian