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cd-hit 4.8.1-2
  • links: PTS, VCS
  • area: main
  • in suites: bullseye, sid
  • size: 1,940 kB
  • sloc: perl: 7,934; cpp: 3,120; python: 771; makefile: 130; sh: 26; ansic: 6
file content (27 lines) | stat: -rw-r--r-- 1,163 bytes parent folder | download
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Source: cd-hit
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Tim Booth <tbooth@ceh.ac.uk>,
           Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 12~),
               help2man,
               zlib1g-dev
Standards-Version: 4.4.0
Vcs-Browser: https://salsa.debian.org/med-team/cd-hit
Vcs-Git: https://salsa.debian.org/med-team/cd-hit.git
Homepage: http://weizhong-lab.ucsd.edu/cd-hit/

Package: cd-hit
Architecture: any
Depends: ${shlibs:Depends},
         ${misc:Depends},
         ${perl:Depends}
Description: suite of programs designed to quickly group sequences
 cd-hit contains a number of programs designed to quickly group
 sequences. cd-hit groups proteins into clusters that meet a user-defined
 similarity threshold. cd-hit-est is similar to cd-hit, but designed to
 group nucleotide sequences (without introns). cd-hit-est-2d is similar
 to cd-hit-2d but designed to compare two nucleotide datasets. A number
 of other related programs are also in this package. Please see the
 cd-hit user manual, also part of this package, for further information.