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usr/lib/cd-hit/cd-hit usr/bin/cd-hit
usr/lib/cd-hit/cd-hit-2d usr/bin/cd-hit-2d
usr/lib/cd-hit/cd-hit-2d-para.pl usr/bin/cd-hit-2d-para
usr/lib/cd-hit/cd-hit-454 usr/bin/cd-hit-454
usr/lib/cd-hit/cd-hit-div.pl usr/bin/cd-hit-div
usr/lib/cd-hit/cd-hit-est usr/bin/cd-hit-est
usr/lib/cd-hit/cd-hit-est-2d usr/bin/cd-hit-est-2d
usr/lib/cd-hit/cd-hit-para.pl usr/bin/cd-hit-para
usr/lib/cd-hit/clstr2tree.pl usr/bin/clstr2tree
usr/lib/cd-hit/clstr_merge_noorder.pl usr/bin/clstr_merge_noorder
usr/lib/cd-hit/clstr_merge.pl usr/bin/clstr_merge
usr/lib/cd-hit/clstr_reduce.pl usr/bin/clstr_reduce
usr/lib/cd-hit/clstr_renumber.pl usr/bin/clstr_renumber
usr/lib/cd-hit/clstr_rev.pl usr/bin/clstr_rev
usr/lib/cd-hit/clstr_sort_by.pl usr/bin/clstr_sort_by
usr/lib/cd-hit/clstr_sort_prot_by.pl usr/bin/clstr_sort_prot_by
usr/lib/cd-hit/make_multi_seq.pl usr/bin/make_multi_seq
## Too generic name, please point your PATH to /usr/lib/cd-hit
# usr/lib/cd-hit/plot_2d.pl usr/bin/plot_2d
# usr/lib/cd-hit/plot_len1.pl usr/bin/plot_len1
#
# Keep this for compatibility reasons for some time
usr/bin/cd-hit usr/bin/cdhit
usr/bin/cd-hit-2d usr/bin/cdhit-2d
usr/bin/cd-hit-454 usr/bin/cdhit-454
usr/bin/cd-hit-est usr/bin/cdhit-est
usr/bin/cd-hit-est-2d usr/bin/cdhit-est-2d
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