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#ifdef HAVE_CONFIG_H
#include "config.h"
#endif
#include <limits.h>
#include <stdarg.h>
#include <stdbool.h>
#include <stdlib.h>
#include <stdio.h>
#include <unistd.h>
#include <mpi.h>
#include <yaxt.h>
#ifdef HAVE_PPM_CORE
#include <ppm/ppm.h>
#endif
#include "cdi.h"
#include "cdipio.h"
#include "cdi_int.h"
#include "dmemory.h"
#include "namespace.h"
#include "pio.h"
#include "pio_client.h"
#include "pio_conf.h"
#include "pio_dist_grid.h"
#include "pio_id_set.h"
#include "pio_impl.h"
#include "pio_serialize.h"
#include "pio_interface.h"
#include "pio_comm.h"
#include "pio_rpc.h"
#include "pio_server.h"
#include "pio_util.h"
#include "resource_handle.h"
#include "resource_unpack.h"
#include "vlist.h"
#include "vlist_var.h"
#ifndef SSIZE_MAX
#define SSIZE_MAX LONG_MAX
#endif
static struct rdmaWin
{
size_t size;
unsigned char *buffer, *head;
MPI_Win win;
int dictSize, dictDataUsed, dictRPCUsed;
bool postSet, refuseFuncCall;
/** data or meta-data updates on this stream are to be communicated */
bool pendingUpdate;
struct partDescPreset clientDeco;
} *txWin = NULL;
static struct idList openStreams;
const char *const funcMap[numRPCFuncs] = {
"streamDefTimestep",
};
float cdiPIOpartInflate_;
static inline void collWait(size_t streamIdx);
static inline void
collWaitAll()
{
size_t openStreamsSize = openStreams.size;
for (size_t streamIdx = 0; streamIdx < openStreamsSize; ++streamIdx)
if (openStreams.entries[streamIdx] != CDI_UNDEFID) collWait(streamIdx);
}
/****************************************************/
void
memcpyPackFunc(void *dataDesc, void *buf, int size, int *pos, void *context)
{
struct memCpyDataDesc *p = dataDesc;
(void) context;
xassert(size >= *pos && (size_t) (size - *pos) >= p->obj_size);
memcpy((unsigned char *) buf + *pos, p->obj, p->obj_size);
*pos += (int) p->obj_size;
}
/****************************************************/
static void
modelWinFlushBuffer(size_t streamIdx)
{
size_t numStreams = openStreams.size;
xassert(streamIdx < numStreams && openStreams.entries[streamIdx] != CDI_UNDEFID && txWin != NULL
&& txWin[streamIdx].buffer != NULL);
#if 0
/* for debugging purposes it might be smart to set the whole buffer
* to 0 */
size_t clearSize = txWin[streamIdx].size;
memset(txWin[streamIdx].buffer, 0, clearSize);
#else
/* but normally, setting the first header record to zero will
* suffice (see below) */
#endif
txWin[streamIdx].head = txWin[streamIdx].buffer + (size_t) txWin[streamIdx].dictSize * sizeof(struct winHeaderEntry);
txWin[streamIdx].refuseFuncCall = 0;
txWin[streamIdx].dictDataUsed = 1;
txWin[streamIdx].dictRPCUsed = 0;
txWin[streamIdx].pendingUpdate = false;
txWin[streamIdx].postSet = false;
*(struct winHeaderEntry *) (void *) txWin[streamIdx].buffer = (struct winHeaderEntry){
.id = HEADERSIZEMARKER,
.specific.headerSize = { .numDataEntries = 0, .numRPCEntries = 0 },
};
}
/************************************************************************/
void
cdiPioClientStreamWinInit(int streamID)
{
size_t streamIdx = insertID(&openStreams, streamID);
txWin = Realloc(txWin, openStreams.size * sizeof(txWin[0]));
txWin[streamIdx].win = MPI_WIN_NULL;
txWin[streamIdx].buffer = NULL;
txWin[streamIdx].postSet = false;
txWin[streamIdx].clientDeco.lists = NULL;
txWin[streamIdx].clientDeco.uids = NULL;
txWin[streamIdx].clientDeco.conversion = NULL;
}
void
cdiPioClientStreamWinDestroy(int streamID)
{
/* no operation on any other window must overlap this call for
* platforms that block the servers in MPI_Win_complete
*/
collWaitAll();
size_t streamIdx = indexOfID(&openStreams, streamID);
if (txWin[streamIdx].clientDeco.lists)
{
size_t nVars = (size_t) (vlistNvars(streamInqVlist(streamID)));
cdiPioDestroyPartDescPreset(1, nVars, &txWin[streamIdx].clientDeco);
}
if (txWin[streamIdx].postSet) xmpi(MPI_Win_wait(txWin[streamIdx].win));
if (txWin[streamIdx].win != MPI_WIN_NULL) xmpi(MPI_Win_free(&txWin[streamIdx].win));
if (txWin[streamIdx].buffer) xmpi(MPI_Free_mem(txWin[streamIdx].buffer));
removeID(&openStreams, streamID);
}
void
cdiPioSetStreamPartDescPreset(int streamID, size_t nVars, const Xt_idxlist *restrict partDesc, const int *restrict conversion)
{
size_t streamIdx = indexOfID(&openStreams, streamID);
Xt_idxlist *restrict partDescCopy = Malloc(nVars * sizeof(Xt_idxlist));
Xt_uid *restrict partDescUID = Malloc(nVars * sizeof(Xt_uid));
for (size_t i = 0; i < nVars; ++i)
{
Xt_uid uid = partDescUID[i] = xt_idxlist_get_uid(partDesc[i]);
for (size_t j = 0; j < i; ++j)
if (partDescUID[j] != uid)
;
else
{
partDescCopy[i] = partDescCopy[j];
goto next_index_list;
}
partDescCopy[i] = xt_idxlist_copy(partDesc[i]);
next_index_list:;
}
txWin[streamIdx].clientDeco.uids = partDescUID;
txWin[streamIdx].clientDeco.lists = partDescCopy;
int *restrict conversionCopy = Malloc(nVars * sizeof(*conversion));
memcpy(conversionCopy, conversion, nVars * sizeof(*conversion));
txWin[streamIdx].clientDeco.conversion = conversionCopy;
}
struct partDescPreset
cdiPioGetStreamPartDescPreset(int streamID)
{
size_t streamIdx = indexOfID(&openStreams, streamID);
return txWin[streamIdx].clientDeco;
}
void
cdiPioClientStreamWinCreate(int streamID, struct collSpec *cspec)
{
/* no operation on any other window must overlap this call for
* platforms that block the servers in MPI_Win_complete
*/
collWaitAll();
struct clientBufSize bufSize = cdiPioClientStreamBufSize(streamID, cspec);
MPI_Info no_locks_info;
xmpi(MPI_Info_create(&no_locks_info));
xmpi(MPI_Info_set(no_locks_info, "no_locks", "true"));
size_t streamIdx = indexOfID(&openStreams, streamID);
int dictSize = bufSize.numDataRecords + bufSize.numRPCRecords;
size_t streamBufSize = bufSize.bufSize;
txWin[streamIdx].dictSize = dictSize;
txWin[streamIdx].size = streamBufSize;
xmpi(MPI_Alloc_mem((MPI_Aint) streamBufSize, MPI_INFO_NULL, &txWin[streamIdx].buffer));
txWin[streamIdx].head = txWin[streamIdx].buffer + (size_t) dictSize * sizeof(struct winHeaderEntry);
MPI_Comm collClientIntraComm = cdiPioInqCollClientIntraComm();
xmpi(MPI_Win_create(txWin[streamIdx].buffer, (MPI_Aint) streamBufSize, 1, no_locks_info, collClientIntraComm,
&txWin[streamIdx].win));
modelWinFlushBuffer(streamIdx);
xmpi(MPI_Info_free(&no_locks_info));
}
bool
cdiPioClientStreamNeedsFlush(int streamID)
{
size_t streamIdx = indexOfID(&openStreams, streamID);
xassert(streamIdx != SIZE_MAX);
return txWin[streamIdx].pendingUpdate & !txWin[streamIdx].postSet;
}
/************************************************************************/
static void
modelWinEnqueue(size_t streamIdx, struct winHeaderEntry header, const void *data, valPackFunc packFunc)
{
struct winHeaderEntry *winDict = (struct winHeaderEntry *) (void *) txWin[streamIdx].buffer;
int targetEntry;
if (header.id > 0 || header.id == PARTDESCMARKER)
targetEntry = (txWin[streamIdx].dictDataUsed)++;
else
targetEntry = txWin[streamIdx].dictSize - ++(txWin[streamIdx].dictRPCUsed);
if (header.id > 0)
{
size_t alignTo = header.id == DATA_HEADER_DOUBLE ? sizeof(double) : sizeof(float);
int offset = header.offset = (int) roundUpToMultiple((size_t) (txWin[streamIdx].head - txWin[streamIdx].buffer), alignTo);
MPI_Comm comm = cdiPioInqInterComm();
packFunc((void *) data, txWin[streamIdx].buffer, (int) txWin[streamIdx].size, &offset, &comm);
txWin[streamIdx].head = txWin[streamIdx].buffer + offset;
}
else if (header.id == PARTDESCMARKER)
{
Xt_uid uid = unpackXTUID(header.specific.partDesc.packedUID);
Xt_idxlist(*restrict partDescPreset) = txWin[streamIdx].clientDeco.lists;
if (!partDescPreset)
{
/* search if same uid entry has already been enqueued */
for (int entry = 2; entry < targetEntry; entry += 2)
{
xassert(winDict[entry].id == PARTDESCMARKER);
if (unpackXTUID(winDict[entry].specific.partDesc.packedUID) == uid)
{
/* duplicate entries are copied only once per timestep */
header.offset = winDict[entry].offset;
goto partDescHeaderFinished;
}
}
/* not yet used partition descriptor, serialize at
* current position */
int position = header.offset = (int) (txWin[streamIdx].head - txWin[streamIdx].buffer);
MPI_Comm comm = cdiPioInqInterComm();
packFunc((void *) data, txWin[streamIdx].buffer, (int) txWin[streamIdx].size, &position, &comm);
txWin[streamIdx].head = txWin[streamIdx].buffer + position;
}
else
{
int varID = winDict[targetEntry - 1].specific.dataRecord.varID;
Xt_uid(*restrict uids) = txWin[streamIdx].clientDeco.uids;
if (uid != uids[varID] && data != partDescPreset[varID])
xabort("error: incorrect index list passed to streamWriteVarPart"
" or streamWriteVarPartF!");
header.offset = -1;
}
partDescHeaderFinished:;
}
else
{
int position = header.offset = (int) (txWin[streamIdx].head - txWin[streamIdx].buffer);
MPI_Comm comm = cdiPioInqInterComm();
packFunc((void *) data, txWin[streamIdx].buffer, (int) txWin[streamIdx].size, &position, &comm);
txWin[streamIdx].head = txWin[streamIdx].buffer + position;
}
txWin[streamIdx].pendingUpdate = true;
winDict[targetEntry] = header;
}
static void
cdiPio_xt_idxlist_pack_wrap(void *data, void *buf, int size, int *pos, void *context)
{
MPI_Comm comm = *(MPI_Comm *) context;
size_t pack_size = xt_idxlist_get_pack_size((Xt_idxlist) data, comm);
xassert(size >= *pos && pack_size <= (size_t) (size - *pos));
xt_idxlist_pack((Xt_idxlist) data, (unsigned char *) buf, size, pos, comm);
}
static inline void
collWait(size_t streamIdx)
{
if (txWin[streamIdx].postSet)
{
xmpi(MPI_Win_wait(txWin[streamIdx].win));
modelWinFlushBuffer(streamIdx);
}
}
static inline void
collProbe(size_t streamIdx)
{
if (!txWin[streamIdx].postSet) return;
int flag;
xmpi(MPI_Win_test(txWin[streamIdx].win, &flag));
if (flag) modelWinFlushBuffer(streamIdx);
}
void
cdiPioRDMAProgress(void)
{
size_t nStreams = openStreams.size;
for (size_t streamIdx = 0; streamIdx < nStreams; ++streamIdx)
if (openStreams.entries[streamIdx] != CDI_UNDEFID) collProbe(streamIdx);
}
static void
cdiPioBufferPartData_(int streamID, int varID, int memtype, const void *packData, valPackFunc packDataFunc, size_t numMissVals,
Xt_idxlist partDesc)
{
size_t streamIdx = indexOfID(&openStreams, streamID);
xassert(streamIdx != SIZE_MAX);
xassert(varID >= 0 && varID < streamInqNvars(streamID));
collWaitAll();
int dataHeaderID = memtype == MEMTYPE_DOUBLE ? DATA_HEADER_DOUBLE : DATA_HEADER_FLOAT;
struct winHeaderEntry dataHeader = { .id = dataHeaderID, .specific.dataRecord = { varID, (int) numMissVals }, .offset = -1 };
modelWinEnqueue(streamIdx, dataHeader, packData, packDataFunc);
{
struct winHeaderEntry partHeader = { .id = PARTDESCMARKER, .offset = 0 };
Xt_uid uid = xt_idxlist_get_uid(partDesc);
packXTUID(partHeader.specific.partDesc.packedUID, uid);
modelWinEnqueue(streamIdx, partHeader, partDesc, cdiPio_xt_idxlist_pack_wrap);
}
txWin[streamIdx].refuseFuncCall = 1;
}
static inline size_t
memtype2ElemSize(int memtype)
{
return memtype == MEMTYPE_DOUBLE ? sizeof(double) : sizeof(float);
}
void
cdiPioBufferPartData(int streamID, int varID, int memtype, const void *data, size_t numMissVals, Xt_idxlist partDesc)
{
size_t chunk = (size_t) (xt_idxlist_get_num_indices(partDesc));
size_t elemSize = memtype2ElemSize(memtype);
cdiPioBufferPartData_(streamID, varID, memtype, &(struct memCpyDataDesc){ data, chunk * elemSize }, memcpyPackFunc, numMissVals,
partDesc);
}
struct scatterGatherDesc
{
void *data;
const int *blocklengths, *displacements;
size_t elemSize;
unsigned numBlocks;
unsigned numElems;
};
static void
scatterGatherPackFunc(void *dataDesc, void *buf, int size, int *pos, void *context)
{
(void) context;
const struct scatterGatherDesc *p = dataDesc;
unsigned numBlocks = p->numBlocks;
const int *bls = p->blocklengths, *disps = p->displacements;
int pos_ = *pos;
unsigned char *dstBuf = (unsigned char *) buf + pos_, *bufEnd = (unsigned char *) buf + size;
size_t elemSize = p->elemSize;
xassert(elemSize <= SSIZE_MAX);
const unsigned char *data = p->data;
unsigned copyCount = 0, numElems = p->numElems;
for (unsigned j = 0; j < numBlocks && copyCount < numElems; ++j)
{
int bl = bls[j];
if (bl > 0)
{
if ((unsigned) bl + copyCount > numElems)
{
bl = (int) (numElems - copyCount);
Warning("%s: %s", "streamWriteScatteredVarPart", "blocks longer than number of elements in index list!");
}
size_t bsize = (size_t) bl * elemSize;
xassert(dstBuf + bsize <= bufEnd);
memcpy(dstBuf, data + (ssize_t) elemSize * (ssize_t) disps[j], bsize);
dstBuf += bsize;
}
}
*pos = (int) (dstBuf - (unsigned char *) buf);
}
void
cdiPioBufferPartDataGather(int streamID, int varID, int memtype, const void *data, int numBlocks, const int blocklengths[],
const int displacements[], size_t numMissVals, Xt_idxlist partDesc)
{
xassert(numBlocks >= 0);
cdiPioBufferPartData_(streamID, varID, memtype,
&(struct scatterGatherDesc){ .data = (void *) data,
.blocklengths = blocklengths,
.displacements = displacements,
.elemSize = memtype2ElemSize(memtype),
.numBlocks = (unsigned) numBlocks,
.numElems = (unsigned) xt_idxlist_get_num_indices(partDesc) },
scatterGatherPackFunc, numMissVals, partDesc);
}
/************************************************************************/
void
pioBufferFuncCall(int streamID, struct winHeaderEntry header, const void *data, valPackFunc dataPackFunc)
{
int funcID = header.id;
int clientRank = commInqRankModel(), numClients = cdiPioCommInqSizeClients(), numColl = commInqSizeColl(),
collRank = cdiPioCollRank(clientRank, numClients, numColl);
xassert(funcID >= MINFUNCID && funcID <= MAXFUNCID);
xdebug("%s, func: %s", "START", funcMap[(-1 - funcID)]);
/* FIXME: move this check to cdiPioClientSetup */
if (clientRank != cdiPioClientRangeStart(collRank, numClients, numColl)) return;
xassert(txWin != NULL);
size_t streamIdx = indexOfID(&openStreams, streamID);
if (streamIdx == SIZE_MAX) streamIdx = insertID(&openStreams, streamID);
collWaitAll();
xassert(txWin[streamIdx].dictRPCUsed + txWin[streamIdx].dictDataUsed < txWin[streamIdx].dictSize
&& txWin[streamIdx].refuseFuncCall == 0);
modelWinEnqueue(streamIdx, header, data, dataPackFunc);
xdebug("%s", "RETURN");
}
void
cdiPioNoPostCommSetup(void)
{
}
/*****************************************************************************/
static int xtInitByCDI = 0;
#ifdef HAVE_PPM_CORE
static int ppmInitByCDI = 0;
#endif
/* pioInit definition must currently compile even in non-MPI configurations */
/**
@brief initializes the MPI_Communicators needed for the
communication between the calculator PEs and the I/O PEs and within the
group of I/O PEs.
commGlob: all PEs
commPIO: I/O PEs, PEs with highest ranks in commGlob
commModel: calculating PEs, no I/O PEs
Collective call
@param commGlob MPI_Communicator of all calling PEs
@param nProcsIO number of I/O PEs
@param partInflate allow for array partitions on comute
PE that are at most sized \f$ partInflate * \lceil arraySize /
numComputePEs \rceil \f$
@param postCommSetupActions function which is called by all I/O servers
after communicator split
@return int indicating wether the calling PE is a calcutator (1) or not (0)
*/
MPI_Comm
pioInit(MPI_Comm commGlob, int nProcsIO, int IOMode, int *pioNamespace, float partInflate, void (*postCommSetupActions)(void))
{
int confH = cdiPioConfCreate();
cdiPioConfSetIOMode(confH, IOMode);
cdiPioConfSetPartInflate(confH, partInflate);
cdiPioConfSetCSRole(confH, cdiPioCSRLastN(commGlob, IOMode, nProcsIO));
cdiPioConfSetPostCommSetupActions(confH, postCommSetupActions);
MPI_Comm retcomm = cdiPioInit(commGlob, confH, pioNamespace);
cdiPioConfDestroy(confH);
return retcomm;
}
static void cdiPioFileWritingInit(void);
MPI_Comm
cdiPioInit(MPI_Comm commGlob, int confResH, int *pioNamespace)
{
namespaceSwitchSet(NSSWITCH_ABORT, NSSW_FUNC(cdiAbortC_MPI));
namespaceSwitchSet(NSSWITCH_WARNING, NSSW_FUNC(cdiPioWarning));
struct cdiPioConf *conf = reshGetVal(confResH, &cdiPioConfOps);
if (cdiPioExtraNSKeys[cdiPioEKConf] == 0) cdiPioExtraNSKeys[cdiPioEKConf] = cdiNamespaceSwitchNewKey();
namespaceSwitchSet(cdiPioExtraNSKeys[cdiPioEKConf], NSSW_DATA(conf));
/* check I/O method plausibility */
int IOMode = conf->IOMode;
if (IOMode < PIO_MINIOMODE || IOMode > PIO_MAXIOMODE) xabort("IOMODE IS NOT VALID.");
if (
#ifdef _POSIX_ASYNCHRONOUS_IO
!sysconf(_SC_ASYNCHRONOUS_IO) &&
#endif
IOMode == PIO_ASYNCH)
xabort("CDI-PIO Output method PIO_ASYNCH is unsupported on this system!");
/* initialize libraries */
#ifdef HAVE_PPM_CORE
if ((ppmInitByCDI = (!PPM_initialized() || PPM_finalized()))) PPM_initialize(&commGlob, NULL, NULL);
#endif
if ((xtInitByCDI = (!xt_initialized() || xt_finalized()))) xt_initialize(commGlob);
int pioNamespace_ = namespaceNew();
int prevNamespace = namespaceGetActive();
namespaceSetActive(pioNamespace_);
/* setup communication */
cdiPioCommInit(commGlob, IOMode, conf->clientServerRole);
int sizeGlob = commInqSizeGlob();
cdiPIOpartInflate_ = conf->partInflate;
namespaceSetActive(prevNamespace);
// JUST FOR TEST CASES WITH ONLY ONE MPI TASK
if (sizeGlob == 1)
{
*pioNamespace = pioNamespace_;
return commInqCommGlob();
}
reshRemove(confResH, &cdiPioConfOps);
namespaceSetActive(pioNamespace_);
#ifdef HAVE_PPM_DIST_ARRAY_H
reshDistGridUnpack = cdiPioDistGridUnpack;
#endif
/* check write buffer size consistency */
{
#ifdef MPI_SIZE_T
size_t writeAggBufLim = conf->writeAggBufLim;
xmpi(MPI_Allreduce(MPI_IN_PLACE, &conf->writeAggBufLim, 1, MPI_SIZE_T, MPI_MAX, commGlob));
#else
unsigned long writeAggBufLim = conf->writeAggBufLim;
xmpi(MPI_Allreduce(MPI_IN_PLACE, &writeAggBufLim, 1, MPI_UNSIGNED_LONG, MPI_MAX, commGlob));
#endif
if (conf->writeAggBufLim != writeAggBufLim)
fprintf(stderr,
"inconsistent write buffer size detected: %zu vs. "
#ifdef MPI_SIZE_T
"%lu\n",
#else
"%zu\n",
#endif
conf->writeAggBufLim, writeAggBufLim);
#ifndef MPI_SIZE_T
conf->writeAggBufLim = writeAggBufLim;
#endif
}
MPI_Comm modelComm;
if (commInqIsProcIO())
{
int serverNamespace = pioNamespace_;
namespaceSetActive(serverNamespace);
namespaceSwitchSet(cdiPioExtraNSKeys[cdiPioEKConf], NSSW_DATA(conf));
cdiPioSerializeSetMPI();
conf->callbacks[CDIPIO_CALLBACK_POSTCOMMSETUP]();
cdiPioFileWritingInit();
if (commInqRankColl() >= 0)
{
cdiPioCollectorMessageLoop();
void (*cdiPioFileWritingFinalize)(void) = namespaceSwitchGet(cdiPioExtraNSKeys[cdiPioEKFileWritingFinalize]).func;
cdiPioFileWritingFinalize();
}
reshListDestruct(serverNamespace);
#ifdef HAVE_PPM_DIST_ARRAY_H
if (commInqRankColl() >= 0) cdiPioDistGridFinalizeOnce(serverNamespace);
#endif
cdiPioCommFinalize();
if (xtInitByCDI) xt_finalize();
#ifdef HAVE_PPM_CORE
if (ppmInitByCDI) PPM_finalize();
#endif
modelComm = MPI_COMM_NULL;
namespaceSetActive(prevNamespace);
namespaceDelete(serverNamespace);
}
else
{
*pioNamespace = pioNamespace_;
cdiPioClientSetup(pioNamespace_, conf);
modelComm = commInqCommModel();
}
namespaceSetActive(prevNamespace);
reshReplace(confResH, conf, &cdiPioConfOps);
return modelComm;
}
static void
cdiPioFileWritingFinalizeDefault(void)
{
xabort("error: failed to setup file writing finalization function!");
}
static void
cdiPioFileWritingInit(void)
{
if (cdiPioExtraNSKeys[cdiPioEKFileWritingFinalize] == 0)
cdiPioExtraNSKeys[cdiPioEKFileWritingFinalize] = cdiNamespaceSwitchNewKey();
namespaceSwitchSet(cdiPioExtraNSKeys[cdiPioEKFileWritingFinalize], NSSW_FUNC(cdiPioFileWritingFinalizeDefault));
int IOMode = commInqIOMode();
xassert(IOMode != PIO_NONE || commInqSizeGlob() == 1);
switch (IOMode)
{
case PIO_NONE: break;
case PIO_MPI: initMPINONB(); break;
case PIO_ASYNCH:
case PIO_WRITER: pioSendInitialize(); break;
case PIO_FPGUARD: initPOSIXFPGUARDSENDRECV(); break;
case PIO_MPI_FW_ORDERED: cdiPioFileWriteOrderedInit(); break;
case PIO_MPI_FW_AT_ALL: cdiPioFileWriteAtAllInit(); break;
case PIO_MPI_FW_AT_REBLOCK: cdiPioFileWriteAtReblockInit(); break;
}
}
/*****************************************************************************/
void
pioEndDef(void)
{
char *buffer;
int bufferSize;
int clientRank = commInqRankModel(), numClients = cdiPioCommInqSizeClients(), numColl = commInqSizeColl(),
collRank = cdiPioCollRank(clientRank, numClients, numColl);
if (clientRank == cdiPioClientRangeStart(collRank, numClients, numColl))
{
MPI_Comm comm = cdiPioInqInterComm();
reshPackBufferCreate(&buffer, &bufferSize, &comm);
xmpi(MPI_Send(buffer, bufferSize, MPI_PACKED, collRank, RESOURCES, comm));
reshPackBufferDestroy(&buffer);
}
#if HAVE_PPM_DIST_ARRAY_H
else
cdiPioDistGridPackAssist();
#endif
}
/************************************************************************/
void
pioEndTimestepping(void)
{
}
/****************************************************/
/**
* @brief is invoked by the calculator PEs, to inform
* the I/O PEs that no more data will be written.
*/
void
pioFinalize(void)
{
xdebug("%s", "START");
/* namespace is unchanged on I/O servers */
int pioNamespace = namespaceGetActive();
if (pioNamespace == 0) return;
reshListDestruct(pioNamespace);
#ifdef HAVE_PPM_DIST_ARRAY_H
cdiPioDistGridFinalizeOnce(pioNamespace);
#endif
int clientRank = commInqRankModel(), numClients = cdiPioCommInqSizeClients(), numColl = commInqSizeColl(),
collRank = cdiPioCollRank(clientRank, numClients, numColl);
if (clientRank == cdiPioClientRangeStart(collRank, numClients, numColl))
xmpi(MPI_Send(NULL, 0, MPI_INT, collRank, FINALIZE, cdiPioInqInterComm()));
xdebug("%s", "SENT MESSAGE WITH TAG \"FINALIZE\"");
Free(txWin);
cdiPioCommFinalize();
idSetDestroy(&openStreams);
if (xtInitByCDI) xt_finalize();
#ifdef HAVE_PPM_CORE
if (ppmInitByCDI) PPM_finalize();
#endif
namespaceDelete(pioNamespace);
xdebug("%s", "RETURN");
}
/************************************************************************/
static void
cdiPioClientStreamIdxWinPost(size_t streamIdx, MPI_Group remoteGroup)
{
struct winHeaderEntry header = { .id = HEADERSIZEMARKER,
.specific.headerSize = { .numDataEntries = txWin[streamIdx].dictDataUsed,
.numRPCEntries = txWin[streamIdx].dictRPCUsed } };
struct winHeaderEntry *winDict = (struct winHeaderEntry *) (void *) txWin[streamIdx].buffer;
winDict[0] = header;
xmpi(MPI_Win_post(remoteGroup, MPI_MODE_NOPUT, txWin[streamIdx].win));
txWin[streamIdx].postSet = true;
}
void
cdiPioClientStreamWinPost(int streamID)
{
MPI_Group remoteGroup = cdiPioInqRemoteGroup();
size_t streamIdx = indexOfID(&openStreams, streamID);
cdiPioClientStreamIdxWinPost(streamIdx, remoteGroup);
}
void
pioWriteTimestep(void)
{
int clientRank = commInqRankModel(), numClients = cdiPioCommInqSizeClients(), numColl = commInqSizeColl(),
collRank = cdiPioCollRank(clientRank, numClients, numColl);
xdebug("%s", "START");
xassert(txWin != NULL);
size_t nStreams = openStreams.size;
int *hasUpdates = Malloc(nStreams * sizeof(hasUpdates[0]));
for (size_t streamIdx = 0; streamIdx < nStreams; ++streamIdx) { hasUpdates[streamIdx] = txWin[streamIdx].pendingUpdate; }
if (clientRank == cdiPioClientRangeStart(collRank, numClients, numColl))
{
xmpi(MPI_Send(hasUpdates, (int) nStreams, MPI_INT, collRank, WRITETS, cdiPioInqInterComm()));
xdebug("%s", "SENT MESSAGE WITH TAG \"WRITETS\"");
}
MPI_Group remoteGroup = cdiPioInqRemoteGroup();
for (size_t streamIdx = 0; streamIdx < nStreams; ++streamIdx)
if (openStreams.entries[streamIdx] != CDI_UNDEFID && hasUpdates[streamIdx])
cdiPioClientStreamIdxWinPost(streamIdx, remoteGroup);
Free(hasUpdates);
xdebug("%s", "RETURN. messages sent, windows posted");
}
void
cdiPioStreamWriteVarPart_(int streamID, int varID, int memtype, const void *data, SizeType numMissVals, Xt_idxlist partDesc)
{
if (CDI_Debug) Message("streamID = %d varID = %d", streamID, varID);
int chunk = xt_idxlist_get_num_indices(partDesc);
xassert(chunk == 0 || data);
void (*myStreamWriteVarPart)(int streamID, int varID, int memtype, const void *data, size_t numMissVals, Xt_idxlist partDesc)
= (void (*)(int, int, int, const void *, size_t, Xt_idxlist)) namespaceSwitchGet(NSSWITCH_STREAM_WRITE_VAR_PART_).func;
if (!myStreamWriteVarPart) xabort("local part writing is unsupported!");
myStreamWriteVarPart(streamID, varID, memtype, data, (size_t) numMissVals, partDesc);
}
void
streamWriteVarPart(int streamID, int varID, const double *data, SizeType numMissVals, Xt_idxlist partDesc)
{
cdiPioStreamWriteVarPart_(streamID, varID, MEMTYPE_DOUBLE, data, numMissVals, partDesc);
}
void
streamWriteVarPartF(int streamID, int varID, const float *data, SizeType numMissVals, Xt_idxlist partDesc)
{
cdiPioStreamWriteVarPart_(streamID, varID, MEMTYPE_FLOAT, data, numMissVals, partDesc);
}
static void
streamWriteScatteredVarPart_(int streamID, int varID, int memtype, const void *data, int numBlocks, const int blocklengths[],
const int displacements[], int numMissVals, Xt_idxlist partDesc)
{
if (CDI_Debug) Message("streamID = %d varID = %d", streamID, varID);
int chunk = xt_idxlist_get_num_indices(partDesc);
xassert(chunk == 0 || data);
void (*myStreamWriteScatteredVarPart)(int streamID, int varID, int memtype, const void *data, int numBlocks,
const int blocklengths[], const int displacements[], int numMissVals, Xt_idxlist partDesc)
= (void (*)(int, int, int, const void *, int, const int[], const int[], int, Xt_idxlist)) namespaceSwitchGet(
NSSWITCH_STREAM_WRITE_SCATTERED_VAR_PART_)
.func;
if (!myStreamWriteScatteredVarPart) xabort("local part writing is unsupported!");
myStreamWriteScatteredVarPart(streamID, varID, memtype, data, numBlocks, blocklengths, displacements, numMissVals, partDesc);
}
void
streamWriteScatteredVarPart(int streamID, int varID, const double *data, int numBlocks, const int blocklengths[],
const int displacements[], int numMissVals, Xt_idxlist partDesc)
{
streamWriteScatteredVarPart_(streamID, varID, MEMTYPE_DOUBLE, data, numBlocks, blocklengths, displacements, numMissVals,
partDesc);
}
void
streamWriteScatteredVarPartF(int streamID, int varID, const float *data, int numBlocks, const int blocklengths[],
const int displacements[], int numMissVals, Xt_idxlist partDesc)
{
streamWriteScatteredVarPart_(streamID, varID, MEMTYPE_FLOAT, data, numBlocks, blocklengths, displacements, numMissVals, partDesc);
}
/*
* Local Variables:
* c-file-style: "Java"
* c-basic-offset: 2
* indent-tabs-mode: nil
* show-trailing-whitespace: t
* require-trailing-newline: t
* End:
*/
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