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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.16.
.TH PARSEDB.PY "1" "October 2020" "ParseDb.py 1.0.1" "User Commands"
.SH NAME
ParseDb.py \- Repertoire clonal assignment toolkit (Python 3)
.SH DESCRIPTION
usage: ParseDb.py [\-\-version] [\-h] ...
.PP
Parses tab delimited database files
.SS "help:"
.TP
\fB\-\-version\fR
show program's version number and exit
.TP
\fB\-h\fR, \fB\-\-help\fR
show this help message and exit
.SS "subcommands:"
.IP
Database operation
.TP
add
Adds field and value pairs.
.TP
delete
Deletes specific records.
.TP
drop
Deletes entire fields.
.TP
index
Adds a numeric index field.
.TP
rename
Renames fields.
.TP
select
Selects specific records.
.TP
sort
Sorts records by field values.
.TP
update
Updates field and value pairs.
.TP
merge
Merges files.
.TP
split
Splits database files by field values.
.SS "output files:"
.IP
sequences
.IP
FASTA formatted sequences output from the subcommands fasta and clip.
.IP
<field>\-<value>
.IP
database files partitioned by annotation <field> and <value>.
.IP
parse\-<command>
.IP
output of the database modification functions where <command> is one of
the subcommands add, index, drop, delete, rename, select, sort or update.
.SS "required fields:"
.IP
sequence_id
.SH AUTHOR
This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.
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