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Source: circlator
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-sequence-python3,
python3-all,
python3-setuptools,
python3-packaging,
python3-openpyxl,
python3-jdcal,
python3-pysam,
python3-pymummer,
python3-pytest <!nocheck>,
fastaq <!nocheck>,
spades <!nocheck>,
bwa <!nocheck>,
prodigal <!nocheck>,
canu <!nocheck>
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/circlator
Vcs-Git: https://salsa.debian.org/med-team/circlator.git
Homepage: https://sanger-pathogens.github.io/circlator/
Rules-Requires-Root: no
Package: circlator
Architecture: all
Depends: ${misc:Depends},
${python3:Depends},
prodigal,
bwa,
mummer,
samtools,
canu
Recommends: spades
Description: circularize genome assemblies
Circlator is a tool to automate assembly circularization for bacterial and
small eukaryotic genomes and produce accurate linear representations of
circular sequences.
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