File: clipper_contrib.dox

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clipper 2.1.20160809-2
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/*! \mainpage Clipper contributed packages.

The Clipper 'contrib' package is a collection of method objects which
are not part of the core data storage and manipulation process, but
which implement common crystallographic tasks.

Many of these tasks can be performed in a variety of ways. For
example, a structure factor calculation can be performed by direct
summation, or by density calculation and FFT. An application may wish
to switch between these. Therefore, an abstract base class is defined
for each type of task, which defines the interface. Actual
implementations are derived from the base class, differing only in
their constructors. These may then be used interchangeably.

To find the documentation for a particular implementation, select the
base class in which you are interested, and then pick the appropriate
implementation from its derived classes.

\par Structure factor calculation from coordinates:
 - clipper::SFcalc_base< T >
  - clipper::SFcalc_iso_sum< T >
  - clipper::SFcalc_aniso_sum< T >
  - clipper::SFcalc_iso_fft< T >
  - clipper::SFcalc_aniso_fft< T >

\par Structure factor calculation against Fo from coordinates:
 - clipper::SFcalc_obs_base< T >
  - clipper::SFcalc_obs_bulk< T >

\par Structure factor weighting (sigmaa):
 - clipper::SFweight_base< T >
  - clipper::SFweight_spline< T >

\par Electron density calculation, mask calculation from coordinates:
 - clipper::EDcalc_base< T >
  - clipper::EDcalc_iso< T >
  - clipper::EDcalc_aniso< T >

\par Map filtering (e.g. for solvent mask estimation from density):
 - clipper::MapFilter_base< T >
  - clipper::MapFilter_slow< T >
  - clipper::MapFilter_fft< T >
 - See also the filter functions, clipper::MapFilterFn_step, clipper::MapFilterFn_linear, clipper::MapFilterFn_quadratic

\par Fragment searching:
 - clipper::FFFear_base< T >
  - clipper::FFFear_slow< T >
  - clipper::FFFear_fft< T >

\par Origin matching:
 - clipper::OriginMatch_base< T >
  - clipper::OriginMatch< T >

\par Skeletonisation:
 - clipper::Skeleton_base< T1, T2 >
  - clipper::Skeleton_basic

*/