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#ifndef PARAMMR_H
#define PARAMMR_H
//
#include "paramcons.h"
//
class ParamMR : public ParamQt
{
public:
ParamMR();
virtual ~ParamMR();
void account();
void consensus(int cutoff,int site=0);
void consensusAllSites(int cutoff);
void makeDensity(ParamCons*paramcons);
void toCSV(QTextStream*out,int cutoff,int step);
void toArtemis(QTextStream*out,int cutoff);
QString toString();
void correctForPrior();
protected:
int its;
int l;
int coef;
vector<vector<RecEdge> > edges;
vector<RecEdge> means;
bool sameEdge(RecEdge*,RecEdge*);
double dist(int,double,int,double);
RecEdge average(RecEdge*r1,RecEdge*r2,int coef);
void gotowards(int e1,double a1,int e2,double a2,int*e3,double*a3,double dist);
vector<vector<vector<int> > > states;
};
#endif
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