File: nuc.data

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clustalw 2.1%2Blgpl-5
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>seq1              200 residues
AAGCTTTATTTTTCCATCTCTTTTACATTCAATGATTCTATTCATTTGTAAGAGAAGTAA
GCANNNNNNACTCCAACAGTGGAGAAAGTCAGACTGATTAAACAGGTNNACCAAACACGT
AAATGTTTTTGNAGAAGGAAGGGNAACTCTGGTGAGCCCGCAGAGGTGCACAGGCTNNNT
AGAGACAGCAGTGTCAGTCC
>seq2              209 residues
TATGCAGACAATTATGATTACATGGGGTAAAAATACTCCAAGATAGTATTCAGTTCTCAA
GATGGTTCATCACATTTGCCAAGTTTTTCTACCATAAAATTCCCCACCAATCCATTTATG
TATAGAGTTGATAGTTAACAGAGATCGGAAATGGCCATTGCATCTTTAGTCTGGATTTCC
TGAGACCTTTGGTTTATTTCTAGGGCTGC
>seq3                  121 residues
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAAGCTAAGCAGG
GTCGGGCCTGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCGGGTGCTGTAGGCTT
T
>seq4               120 residues
NNNNATACTCTGGTTTCTCTTCAGATCGTATAAATCTTTCCCCTTTCANCAAAGATTTCC
GTGGAGAGGAATAACTCTGAGTCTTAAGCTAATTTTTTGAGCCTTGCTCCGACAAGGCTA
>seq5                21 residues
AGCCTTGTTCCGACAAGGCTA
>seq6                120 residues
NNNNATACTCTGGTTTCTCTTCAGATCGCATAAATCTTTCCCCTTTCANCAAAGATTTCC
GTGGAGAGGAACAACTCTGAGTCTTAACCCAATTTTTTGAGCCTTGCCTTGGCAAGGCTA