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/**
* Changes:
* 12-4-07, Mark Larkin, Removed destructor. No need to delete QObjects.
*/
#ifndef ALIGNOUTPUTFILENAMES_H
#define ALIGNOUTPUTFILENAMES_H
#include <QDialog>
#include <memory>
#include "ClustalQtParams.h"
class QPushButton;
class QGroupBox;
class QComboBox;
class QLabel;
class QCheckBox;
class QVBoxLayout;
class QGridLayout;
class QLineEdit;
class AlignOutputFileNames : public QDialog
{
Q_OBJECT
public:
AlignOutputFileNames(QString inputFileName, FileNameDialogType _type,
AlignType _alignType, QString profileName = "");
clustalw::AlignmentFileNames getNames();
bool getRealignEndGapPen(){return realignEndGapPen;}
protected:
private slots:
void accept();
void cancel();
void browseGuideTreeSeq();
void browseGuideTreeProfile();
void browseInputTreeSeq();
void browseInputTreeProfile();
void browseClustal();
void browseNBRF();
void browseGCG();
void browseNexus();
void browseFasta();
void browsePhylip();
void browseGDE();
private:
void browse(QLineEdit* lineEditName);
void browseInputTree(QLineEdit* lineEditName);
void setUpLayout();
void setUpTopBox();
void setUpOptional();
void setAllPtrsToNull();
QString getPathFromFileName(QString fileName);
QVBoxLayout* mainLayout;
QGridLayout* topBoxLayout;
QGridLayout* fileLayout;
QGridLayout* otherParamLayout;
QPushButton* okButton;
QPushButton* alignOutCancelButton;
QPushButton* guideTreeSeqBrowseButton;
QPushButton* guideTreeProfile2BrowseButton;
QPushButton* clustalBrowseButton;
QPushButton* nbrfBrowseButton;
QPushButton* gcgBrowseButton;
QPushButton* phylipBrowseButton;
QPushButton* gdeBrowseButton;
QPushButton* nexusBrowseButton;
QPushButton* fastaBrowseButton;
QGroupBox* fileBox;
QGroupBox* topBox;
QComboBox* realignSegEndGapPenalties;
QLabel* guideTreeNameLabelSeq;
QLabel* outputFilesLabel;
QLabel* clustalNameLabel;
QLabel* nbrfNameLabel;
QLabel* gcgNameLabel;
QLabel* phylipNameLabel;
QLabel* gdeNameLabel;
QLabel* nexusNameLabel;
QLabel* fastaNameLabel;
QLabel* realignSegEndGapPenaltiesLabel;
QLineEdit* guideTreeNameSeq;
QLineEdit* guideTreeNameProfile2;
QLineEdit* clustalName;
QLineEdit* nbrfName;
QLineEdit* gcgName;
QLineEdit* phylipName;
QLineEdit* gdeName;
QLineEdit* nexusName;
QLineEdit* fastaName;
FileNameDialogType type;
AlignType alignType;
QString title;
QString filePath;
QString profile2Path;
auto_ptr<clustalw::AlignmentFileNames> outFileNames;
static const int MinLineEditWidth = 250;
bool realignEndGapPen;
};
#endif
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