1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
|
# If this example is not executed from the directory containing the
# CMOR code, please first complete the following steps:
#
# 1. In any directory, create 'Tables/', 'Test/' and 'CMIP6/' directories.
#
# 2. Download
# https://github.com/PCMDI/cmor/blob/master/TestTables/CMIP6_Omon.json
# and https://github.com/PCMDI/cmor/blob/master/TestTables/CMIP6_CV.json
# to the 'Tables/' directory.
#
# 3. Download
# https://github.com/PCMDI/cmor/blob/master/Test/<filename>.json
# to the 'Test/' directory.
import cmor
import numpy
import unittest
import sys
import os
import tempfile
import base_CMIP6_CV
class TestCase(base_CMIP6_CV.BaseCVsTest):
def testCMIP6(self):
# -------------------------------------------
# Try to call cmor with a bad institution_ID
# -------------------------------------------
try:
cmor.setup(inpath='Tables', netcdf_file_action=cmor.CMOR_REPLACE, logfile=self.tmpfile)
cmor.dataset_json("Test/CMOR_input_example.json")
cmor.set_cur_dataset_attribute("experiment_id", "ssp434")
cmor.set_cur_dataset_attribute(
"parent_experiment_id", "historical")
cmor.set_cur_dataset_attribute("parent_activity_id", "CMIP")
cmor.set_cur_dataset_attribute("activity_id", "ScenarioMIP")
cmor.set_cur_dataset_attribute("source_type", "AOGCM")
cmor.set_cur_dataset_attribute("sub_experiment_id", "none")
cmor.set_cur_dataset_attribute(
"parent_variant_label", "r11i123p4556f333")
cmor.set_cur_dataset_attribute(
"parent_source_id", "PCMDI-test-1-0")
cmor.set_cur_dataset_attribute("parent_mip_era", "CMIP6")
cmor.set_cur_dataset_attribute(
"parent_time_units", "days since 1980-01")
# ------------------------------------------
# load Omon table and create masso variable
# ------------------------------------------
cmor.load_table("CMIP6_Omon.json")
itime = cmor.axis(table_entry="time", units='months since 2010',
coord_vals=numpy.array([0, 1, 2, 3, 4.]),
cell_bounds=numpy.array([0, 1, 2, 3, 4, 5.]))
ivar = cmor.variable(
table_entry="masso",
axis_ids=[itime],
units='kg')
data = numpy.random.random(5)
for i in range(0, 5):
cmor.write(ivar, data[i:i])
self.delete_files += [cmor.close(ivar, True)]
cmor.close()
except BaseException as e:
if str(e) == "Problem with 'cmor.write'. Please check the logfile (if defined).":
self.assertCV('1980-01')
pass
else:
raise
if __name__ == '__main__':
unittest.main()
|
