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/*
//
// Copyright 1997-2009 Torsten Rohlfing
//
// Copyright 2004-2012 SRI International
//
// This file is part of the Computational Morphometry Toolkit.
//
// http://www.nitrc.org/projects/cmtk/
//
// The Computational Morphometry Toolkit is free software: you can
// redistribute it and/or modify it under the terms of the GNU General Public
// License as published by the Free Software Foundation, either version 3 of
// the License, or (at your option) any later version.
//
// The Computational Morphometry Toolkit is distributed in the hope that it
// will be useful, but WITHOUT ANY WARRANTY; without even the implied
// warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU General Public License for more details.
//
// You should have received a copy of the GNU General Public License along
// with the Computational Morphometry Toolkit. If not, see
// <http://www.gnu.org/licenses/>.
//
// $Revision: 5436 $
//
// $LastChangedDate: 2018-12-10 19:01:20 -0800 (Mon, 10 Dec 2018) $
//
// $LastChangedBy: torstenrohlfing $
//
*/
#ifndef __cmtkTypedStreamStudylist_h_included_
#define __cmtkTypedStreamStudylist_h_included_
#include <cmtkconfig.h>
#include <Base/cmtkAffineXform.h>
#include <Base/cmtkWarpXform.h>
#include <System/cmtkSmartPtr.h>
#include <string>
namespace
cmtk
{
/** \addtogroup IO */
//@{
/** Studylist with typedstream file system interface.
* This class provides the necessary functions to read studylist objects
* from typedstream archives.
*/
class TypedStreamStudylist
{
public:
/// Smart pointer to TypedStreamStudylist
typedef SmartPointer<TypedStreamStudylist> SmartPtr;
/// Default conctructor.
TypedStreamStudylist();
/// Destructor.
~TypedStreamStudylist();
/** Read constructor.
*/
TypedStreamStudylist ( const std::string& studylistpath /*!< The typedstream archive to read the object from. */)
{
this->Clear();
this->Read( studylistpath );
}
/// Read object from disk.
bool Read( const std::string& studylistpath );
/// Return affine transformation as stored in the studylist.
AffineXform::SmartPtr& GetAffineXform()
{
return this->m_AffineXform;
}
/// Return local deformation as stored in the studylist.
WarpXform::SmartPtr& GetWarpXform()
{
return this->m_WarpXform;
}
/// Return study path.
const char* GetStudyPath( const int index ) const
{
return StudyPath[index];
}
/// Return reference study path.
const char* GetReferenceStudyPath() const
{
return StudyPath[ReferenceStudyIndex];
}
/// Return floating study path.
const char* GetFloatingStudyPath( const int floatingIndex = 0 ) const
{
if ( floatingIndex < ReferenceStudyIndex )
return StudyPath[floatingIndex];
else
if ( floatingIndex < 1 )
return StudyPath[floatingIndex+1];
else
return NULL;
}
private:
/// The names of the two studies referenced in the studylist.
char *StudyPath[2];
/// Index of the reference study among the studies in this list (from 0).
int ReferenceStudyIndex;
/// Pointer to the affine transformation of this studylist.
AffineXform::SmartPtr m_AffineXform;
/// Pointer to the local deformation of this studylist.
WarpXform::SmartPtr m_WarpXform;
/// Initialize all internal data structures.
void Clear();
};
//@}
} // namespace cmtk
#endif // #ifndef __cmtkTypedStreamStudylist_h_included_
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