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-- This is an example illustrating how to use cnrun package in Lua.
--
-- 1. After loading the cnrun module with 'require', the first step is
-- to get or create an interpreter context. It is an opaque light
-- user data object, which you will pass as the first argument to
-- all subsequent calls to cnrun functions.
--
-- 2. You can create and keep multiple models in a context, modify and
-- advance them independently. Models are identified by a label (a
-- string).
--
-- 3. On error, all cnrun methods return two values: first a nil,
-- second a string describing what went wrong. On success, the
-- first value is 1 (an integer), and the rest are method-specific.
--
-- 4. Don't lose the context object. It will not be gabage-collected
-- for you (it is a C++ thing).
local effective_unpack = table.unpack
if _VERSION == "Lua 5.1" then
effective_unpack = unpack
end
local M = require("cnrun")
local res, ult, result
local C, model
function Pw (str) print ("\027[01;1m" .. str .. "\027[00m") end
function Pg (str) print ("\027[01;32m" .. str .. "\027[00m") end
function Pr (str) print ("\027[01;31m" .. str .. "\027[00m") end
function Pok ()
print ("\027[01;34m" .. "ok" .. "\027[00m")
print ()
end
function ASSERT (a1, a2)
res, ult = a1, a2
if res == nil then
Pr (ult)
os.exit (2)
end
Pok ()
end
function ASSERT_FALSE (a1, a2)
res, ult = a1, a2
if res ~= nil then
Pr (res)
Pr (ult)
os.exit (2)
end
Pg ("ok (" .. ult .. ")")
print ()
end
function print_units (model_name, ult, unit_regex)
Pg ("There are " .. #ult .. " unit(s) matching \"" .. unit_regex .. "\"")
local unit_list = ult
local fmt = " %-10s %-16s %-16s %-12s %-16s %-6s"
Pg (string.format(
fmt,
"label", "class", "family", "species", "has_sources", "is_altered"))
Pg (string.rep('-', 87))
for _, u in ipairs(unit_list) do
result = {M.get_unit_properties (C, model_name, u)}
res, ult = result[1], {effective_unpack(result, 2)}
local b = function (x) if x then return "yes" else return "no" end end
Pg (string.format(
fmt,
ult[1], ult[2], ult[3], ult[4], b(ult[5]), b(ult[6])))
end
print()
end
function compare_models (model_name1, model_name2)
local result1 = {M.get_units_matching(C, model_name1, ".*")}
local result2 = {M.get_units_matching(C, model_name2, ".*")}
res, ult1 = result[1], {effective_unpack(result1, 2)}
ASSERT (res, ult1)
res, ult2 = result[1], {effective_unpack(result2, 2)}
ASSERT (res, ult2)
local relevant_list1 = get_relevant_unit_params (model_name1, ult1)
local relevant_list2 = get_relevant_unit_params (model_name2, ult2)
return relevant_list1 == relevant_list2
end
function get_relevant_unit_params (model_name, unit_list)
local rup = {}
for _, u in ipairs(unit_list) do
result = {M.get_unit_properties (C, model_name, u)}
res, ult = result[1], {effective_unpack(result, 2)}
table.insert (rup, {ult[1], ult[2], ult[3], ult[4], ult[5], ult[6]})
end
return rup
end
-- main
local mname = "FAFA"
local verbosely = 3
do
Pw ("Dump units")
M.dump_available_units ()
end
Pw ("Obtain context")
ASSERT (M.get_context ())
C = ult
Pw ("Create model")
ASSERT (M.new_model (C, mname))
model = ult
M.set_model_parameter (C, mname, "verbosely", verbosely)
result = {M.list_models (C)}
ASSERT (result[1], {effective_unpack(result, 2)})
do
Pg ("Model(s):")
local model_list = ult
Pg (table.concat(model_list))
print ()
end
Pw ("Import NML")
ASSERT (M.import_nml (C, mname, "m.nml"))
do
Pw ("Testing NML export")
local mname2 = "FAFA2"
-- cwd is specially created for us in test target: ./ is entirely
-- at our disposal
local f2 = "./m2.nml"
Pw ("Exporting to " .. f2)
ASSERT (
M.export_nml (C, mname, f2))
M.new_model (C, mname2)
Pw ("Importing into new model from " .. f2)
ASSERT (
M.import_nml (C, mname2, f2))
Pw ("Comparing old and new models")
if compare_models (mname, mname2) then
print ()
Pg ("Models appear to be different:")
Pg ("Original model:")
print_units (mname, ult1, ".*")
Pg ("Reimported model:")
print_units (mname2, ult2, ".*")
return 1
end
Pg ("Models are pretty much the same")
print ()
ASSERT (M.delete_model (C, mname2))
end
do
Pg ("Host parmeters:")
local parameters = {
"verbosely", "integration_dt_min",
"integration_dt_max", "integration_dt_cap",
"listen_dt", "listen_mode",
"sxf_start_delay", "sxf_period", "sdf_sigma"
}
local fmt = " %22s: %-q"
for i,p in ipairs(parameters) do
res, ult = M.get_model_parameter (C, mname, p)
Pg (string.format (fmt, p, ult))
end
print ()
end
do
Pw ("Delete nonexistent model")
ASSERT_FALSE (M.delete_model (C, "fafa moo"))
end
do
local regexp = "L.*"
Pw ("Get units matching \"" .. regexp .. "\"")
result = {M.get_units_matching(C, mname, regexp)}
ASSERT (
result[1], {effective_unpack(result, 2)})
print_units (mname, ult, "L.*")
end
do
Pw ("Advance 10 sec")
ASSERT (M.advance (C, mname, 10000))
end
do
Pw ("Get parameter")
local u, p, v0, v9, vr = "LNz.0", "gNa"
ASSERT (M.get_unit_parameter (C, mname, u, p))
v0 = ult
Pw ("Set new value")
ASSERT (M.set_unit_parameter (C, mname, u, p, v0 * 2))
Pw ("Get again to check")
ASSERT (M.get_unit_parameter (C, mname, u, p))
v9 = ult
Pw ("Revert to stock")
ASSERT (M.revert_matching_unit_parameters (C, mname, u))
local count_reset = ult
ASSERT (M.get_unit_parameter (C, mname, u, p))
vr = ult
Pg (string.format(
".. changed %s of %s from %g to %g, then reset (%d affected) to %g\n",
p, u, v0, v9, count_reset, vr))
end
do
Pw ("Modify parameter in bulk:")
local us, ut, gsyn = "LNz.0", "LN1.0"
ASSERT (M.set_matching_synapse_parameter (C, mname, us, ut, "gsyn", 4.2))
Pg (string.format(
".. changed gsyn of synapse connecting %s to %s, to %g\n",
us, ut, 4.2))
end
do
Pw ("Describe")
ASSERT (M.describe_model (C, mname))
end
do
Pw ("Advance, check state variables")
for i = 1, 6, 1 do
M.advance (C, mname, 1000)
result = {M.get_unit_vars (C, mname, "LNz.0")}
res, ult = result[1], {effective_unpack(result, 2)}
Pg (table.concat(ult, '; '))
end
print()
end
do
Pw ("Putout")
local affected, remaining
result = {M.get_units_matching(C, mname, ".*")}
res, ult = result[1], {effective_unpack(result, 2)}
local unit_list = ult
math.randomseed(os.time())
local deleting = unit_list[math.random(1, #unit_list)]
-- deleting, _ = string.gsub(deleting, ".", "\\.")
ASSERT (M.putout (C, mname, deleting))
Pg (string.format(".. deleted unit %s", deleting))
print()
end
do
Pw ("Decimate")
local affected, remaining
ASSERT (M.decimate (C, mname, "L.*", 0.3))
affected, remaining = ult
remaining = #{M.get_units_matching (C, mname, ".*")} - 1
Pg (string.format(
".. %d units gone, %d remaining",
affected, remaining))
print()
end
do
Pw ("Delete model")
ASSERT (M.delete_model (C, mname))
Pg ("Model ".. ult .. " deleted")
Pw ("Drop context")
ASSERT (M.drop_context (C))
end
print ("Test passed")
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