File: 1000000-modified-enums.cif

package info (click to toggle)
cod-tools 2.3%2Bdfsg-3
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 114,852 kB
  • sloc: perl: 53,336; sh: 23,842; ansic: 6,318; xml: 1,982; yacc: 1,112; makefile: 716; python: 158; sql: 73
file content (340 lines) | stat: -rw-r--r-- 11,657 bytes parent folder | download | duplicates (8)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
#------------------------------------------------------------------------------
#$Date: 2010-01-30 15:59:17 +0200 (Sat, 30 Jan 2010) $
#$Revision: 966 $
#$URL: svn://www.crystallography.net/cod/cif/1/1000000.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/. The original data for this entry
# were provided by IUCr Journals, http://journals.iucr.org/.
#
# The file may be used within the scientific community so long as
# proper attribution is given to the journal article from which the
# data were obtained.
#
data_1000000
_[local]_cod_duplicate_entry 2011331
_space_group_IT_number           14
_symmetry_space_group_name_Hall  '-P 2yn'
_symmetry_space_group_name_H-M   'P 1 21/n 1'
_[local]_cod_cif_authors_sg_H-M  P2(1)/n
loop_
_publ_author_name
'Phan Thanh, S.'
'Marrot, J.'
'Renaudin, J.'
'Maisonneuve, V.'
_publ_section_title
;
[H~3~N(CH~2~)~5~NH~3~].AlP~2~O~8~H, a one-dimensional aluminophosphate
;
_journal_issue                   9
_journal_name_full               'Acta Crystallographica, Section C'
_journal_page_first              1073
_journal_page_last               1074
_journal_volume                  56
_journal_year                    2000
_chemical_formula_moiety         '(C5 H16 N2 )[AlHP2 O8 ]'
_chemical_formula_sum            'C5 H17 Al N2 O8 P2'
_chemical_formula_weight         322.13
_symmetry_cell_setting           Monoclinic
_audit_creation_method           SHELXL-97
_cell_angle_alpha                90.00
_cell_angle_beta                 95.1470(10)
_cell_angle_gamma                90.00
_cell_formula_units_Z            4
_cell_length_a                   7.8783(2)
_cell_length_b                   10.46890(10)
_cell_length_c                   16.0680(4)
_cell_measurement_reflns_used    5007
_cell_measurement_temperature    296(2)
_cell_measurement_theta_max      29.83
_cell_measurement_theta_min      2.32
_cell_volume                     1319.90(5)
_computing_cell_refinement       SMART
_computing_data_collection       'SMART (Siemens, 1996a)'
_computing_data_reduction        'SHELXTL96 (Siemens, 1996b)'
_computing_molecular_graphics    'DIAMOND (Bergerhoff, 1996)'
_computing_publication_material  SHELXTL
_computing_structure_refinement  'SHELXL93 (Sheldrick, 1993)'
_computing_structure_solution    'SHELXS86 (Sheldrick, 1990)'
_diffrn_ambient_temperature      296(2)
_diffrn_measurement_device       'Siemens SMART diffractometer'
_diffrn_measurement_method       '\w scans'
_diffrn_radiation_monochromator  graphite
_diffrn_radiation_source         'fine-focus sealed tube'
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     .71073
_diffrn_reflns_av_R_equivalents  .0383
_diffrn_reflns_av_sigmaI/netI    .0532
_diffrn_reflns_limit_h_max       10
_diffrn_reflns_limit_h_min       -10
_diffrn_reflns_limit_k_max       13
_diffrn_reflns_limit_k_min       -14
_diffrn_reflns_limit_l_max       9
_diffrn_reflns_limit_l_min       -21
_diffrn_reflns_number            8939
_diffrn_reflns_theta_max         29.83
_diffrn_reflns_theta_min         2.32
_exptl_absorpt_coefficient_mu    .429
_exptl_absorpt_correction_T_max  .978
_exptl_absorpt_correction_T_min  .844
_exptl_absorpt_correction_type   semi-empirical
_exptl_absorpt_process_details   'SADABS (Sheldrick, 1996)'
_exptl_crystal_colour            colorless
_exptl_crystal_density_diffrn    1.621
_exptl_crystal_density_meas      'not measured'
_exptl_crystal_description       parallelepiped
_exptl_crystal_F_000             672
_exptl_crystal_size_max          .12
_exptl_crystal_size_mid          .06
_exptl_crystal_size_min          .05
_refine_diff_density_max         1.357
_refine_diff_density_min         -.604
_refine_ls_extinction_coef       .013(8)
_refine_ls_extinction_method     'SHELXL93 (Sheldrick, 1993)'
_refine_ls_goodness_of_fit_all   1.055
_refine_ls_goodness_of_fit_ref   1.080
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     167
_refine_ls_number_reflns         2521
_refine_ls_number_restraints     4
_refine_ls_restrained_S_all      1.370
_refine_ls_restrained_S_obs      1.096
_refine_ls_R_factor_all          .1073
_refine_ls_R_factor_gt           .0584
_refine_ls_shift/esd_mean        .000
_refine_ls_shift/su_max          <0.001
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_scheme
'calc w = 1/[\s^2^(Fo^2^)+(0.0573P)^2^+3.0698P] where P=(Fo^2^+2Fc^2^)/3'
_refine_ls_wR_factor_all         .2069
_refine_ls_wR_factor_ref         .1362
_reflns_number_gt                1901
_reflns_number_total             3421
_reflns_threshold_expression     I>2\s(I)
_[local]_cod_data_source_file    gs1096.cif
loop_
_symmetry_equiv_pos_as_xyz
'x, y, z'
'-x+1/2, y+1/2, -z+1/2'
'-x, -y, -z'
'x-1/2, -y-1/2, z-1/2'
loop_
_atom_site_aniso_label
_atom_site_aniso_U_11
_atom_site_aniso_U_22
_atom_site_aniso_U_33
_atom_site_aniso_U_12
_atom_site_aniso_U_13
_atom_site_aniso_U_23
P1 .0276(5) .0230(5) .0341(6) .0016(4) .0063(4) .0016(4)
P2 .0259(5) .0418(6) .0193(5) -.0018(4) .0019(4) -.0034(4)
Al1 .0218(6) .0289(6) .0233(6) .0004(4) .0024(4) -.0027(4)
O1 .041(2) .048(2) .0262(15) .0047(14) .0096(12) -.0020(13)
O2 .036(2) .0285(15) .049(2) .0033(12) .0141(13) -.0019(13)
O3 .0279(15) .049(2) .037(2) -.0003(13) -.0009(12) -.0117(13)
O4 .042(2) .060(2) .039(2) -.019(2) .0100(14) -.016(2)
O5 .036(2) .046(2) .047(2) .0153(14) -.0034(14) -.0090(14)
O6 .055(2) .032(2) .056(2) -.0010(14) .022(2) .0116(14)
O7 .060(2) .073(2) .024(2) .015(2) .0098(14) .0063(15)
O8 .045(2) .036(2) .038(2) -.0117(14) .0052(13) -.0015(13)
N1 .067(3) .030(2) .037(2) -.006(2) .016(2) -.003(2)
C1 .080(4) .070(4) .080(5) .012(3) .000(4) -.026(3)
C2 .073(4) .123(7) .067(4) -.002(4) .008(3) -.005(4)
C3 .097(6) .158(10) .077(5) -.056(6) .015(4) -.002(6)
C4 .169(13) .130(10) .153(12) -.019(9) -.024(10) .010(8)
C5 .099(6) .134(7) .063(4) -.075(5) .004(4) -.007(4)
N2 .041(2) .052(2) .039(2) -.002(2) .006(2) .012(2)
loop_
_atom_site_label
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_thermal_displace_type
_atom_site_calc_flag
_atom_site_refinement_flags
_atom_site_occupancy
_atom_site_type_symbol
P1 .55909(13) .78402(9) .02396(7) .0280(3) Uani D . 1 P
P2 .09646(13) 1.05563(11) .13485(6) .0290(3) Uani d . 1 P
Al1 .24723(13) .95928(11) -.02995(7) .0246(4) Uani d . 1 Al
O1 .1684(4) .9724(3) .0667(2) .0379(7) Uani d . 1 O
O2 .6564(4) .7078(3) -.0386(2) .0373(7) Uani d . 1 O
H2 .7123 .7571 -.0649 .056 Uiso calc R 1 H
O3 .0882(4) .9116(3) -.1048(2) .0381(7) Uani d . 1 O
O4 .1982(4) 1.1793(3) .1459(2) .0467(9) Uani d . 1 O
O5 .4005(4) .8408(3) -.0252(2) .0435(8) Uani d . 1 O
O6 .5116(4) .6993(3) .0927(2) .0466(8) Uani d . 1 O
O7 .1067(5) .9814(4) .2149(2) .0521(9) UANI d . 1 O
O8 .6701(4) .8956(3) .0585(2) .0398(8) Uani d . 1 O
N1 .5653(6) .4525(4) .1464(2) .0438(10) Uani d . 1 N
H1A .4934 .4053 .1133 .066 Uiso calc R 1 H
H1B .5704 .5309 .1254 .066 Uiso calc R 1 H
H1C .5288 .4565 .1972 .066 Uiso calc R 1 H
C1 .7372(9) .3936(7) .1518(5) .077(2) Uani d D 1 C
H1D .7840 .4038 .0984 .092 Uiso calc R 1 H
H1E .7258 .3028 .1618 .092 Uiso calc R 1 H
C2 .8618(10) .4488(8) .2194(5) .088(2) Uani d D 1 C
H2A .8225 .4271 .2732 .105 Uiso calc R 1 H
H2B .9709 .4071 .2162 .105 Uiso calc R 1 H
C3 .8903(13) .5913(9) .2175(5) .110(3) Uani d D 1 C
H3A .7912 .6290 .2395 .132 Uiso calc R 1 H
H3B .9855 .6077 .2587 .132 Uiso calc R 1 H
C4 .9232(15) .6711(14) .1428(8) .153(5) Uani d D 1 C
H4A .8502 .6411 .0950 .184 Uiso calc R 1 H
H4B .8917 .7587 .1534 .184 Uiso calc R 1 H
C5 1.1025(11) .6688(10) .1213(5) .099(3) Uani d D 1 C
H5A 1.1363 .5802 .1162 .118 Uiso calc R 1 H
H5B 1.1062 .7081 .0669 .118 Uiso calc R 1 H
N2 1.2290(5) .7318(4) .1793(3) .0439(9) Uani d . 1 N
H2C 1.3301 .7296 .1586 .066 Uiso calc R 1 H
H2D 1.2357 .6916 .2283 .066 Uiso calc R 1 H
H2E 1.1984 .8127 .1863 .066 Uiso calc R 1 H
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
Al Al .0645 .0514 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
P P .1023 .0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle_site_symmetry_1
_geom_angle_site_symmetry_3
_geom_angle
_geom_angle_publ_flag
O6 P1 O8 . . 111.0(2) ?
O6 P1 O5 . . 111.4(2) ?
O8 P1 O5 . . 107.6(2) ?
O6 P1 O2 . . 110.4(2) ?
O8 P1 O2 . . 109.3(2) ?
O5 P1 O2 . . 107.1(2) ?
O7 P2 O4 . . 110.6(2) ?
O7 P2 O3 . 3_575 111.3(2) ?
O4 P2 O3 . 3_575 108.8(2) ?
O7 P2 O1 . . 108.7(2) ?
O4 P2 O1 . . 109.8(2) ?
O3 P2 O1 3_575 . 107.6(2) ?
O5 Al1 O1 . . 108.9(2) ?
O5 Al1 O8 . 3_675 111.3(2) ?
O1 Al1 O8 . 3_675 110.0(2) ?
O5 Al1 O3 . . 106.4(2) ?
O1 Al1 O3 . . 110.6(2) ?
O8 Al1 O3 3_675 . 109.6(2) ?
P2 O1 Al1 . . 149.8(2) ?
P1 O2 H2 . . 109.47(12) ?
P2 O3 Al1 3_575 . 139.7(2) ?
P1 O5 Al1 . . 146.4(2) ?
P1 O8 Al1 . 3_675 142.0(2) ?
C1 N1 H1A . . 109.5(3) ?
C1 N1 H1B . . 109.5(4) ?
H1A N1 H1B . . 109.5 ?
C1 N1 H1C . . 109.5(3) ?
H1A N1 H1C . . 109.5 ?
H1B N1 H1C . . 109.5 ?
N1 C1 C2 . . 114.5(5) y
N1 C1 H1D . . 108.6(4) ?
C2 C1 H1D . . 108.6(4) ?
N1 C1 H1E . . 108.6(3) ?
C2 C1 H1E . . 108.6(5) ?
H1D C1 H1E . . 107.6 ?
C3 C2 C1 . . 116.8(7) y
C3 C2 H2A . . 108.1(5) ?
C1 C2 H2A . . 108.1(5) ?
C3 C2 H2B . . 108.1(5) ?
C1 C2 H2B . . 108.1(4) ?
H2A C2 H2B . . 107.3 ?
C4 C3 C2 . . 127.0(9) y
C4 C3 H3A . . 105.6(7) ?
C2 C3 H3A . . 105.6(5) ?
C4 C3 H3B . . 105.6(6) ?
C2 C3 H3B . . 105.6(5) ?
H3A C3 H3B . . 106.1 ?
C5 C4 C3 . . 114.4(9) y
C5 C4 H4A . . 108.7(7) ?
C3 C4 H4A . . 108.7(7) ?
C5 C4 H4B . . 108.7(7) ?
C3 C4 H4B . . 108.7(7) ?
H4A C4 H4B . . 107.6 ?
N2 C5 C4 . . 117.0(9) y
N2 C5 H5A . . 108.0(5) ?
C4 C5 H5A . . 108.0(7) ?
N2 C5 H5B . . 108.0(4) ?
C4 C5 H5B . . 108.0(6) ?
H5A C5 H5B . . 107.3 ?
C5 N2 H2C . . 109.5(4) ?
C5 N2 H2D . . 109.5(4) ?
H2C N2 H2D . . 109.5 ?
C5 N2 H2E . . 109.5(5) ?
H2C N2 H2E . . 109.5 ?
H2D N2 H2E . . 109.5 ?
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_site_symmetry_2
_geom_bond_distance
_geom_bond_publ_flag
P1 O6 . 1.490(3) y
P1 O8 . 1.533(3) y
P1 O5 . 1.537(3) y
P1 O2 . 1.539(3) y
P2 O7 . 1.499(3) y
P2 O4 . 1.525(3) y
P2 O3 3_575 1.530(3) y
P2 O1 . 1.546(3) y
Al1 O5 . 1.727(3) y
Al1 O1 . 1.729(3) y
Al1 O8 3_675 1.731(3) y
Al1 O3 . 1.731(3) y
O2 H2 . .82 ?
O3 P2 3_575 1.530(3) ?
O8 Al1 3_675 1.731(3) ?
N1 C1 . 1.483(8) y
N1 H1A . .89 ?
N1 H1B . .89 ?
N1 H1C . .89 ?
C1 C2 . 1.512(8) y
C1 H1D . .97 ?
C1 H1E . .97 ?
C2 C3 . 1.509(9) y
C2 H2A . .97 ?
C2 H2B . .97 ?
C3 C4 . 1.503(9) y
C3 H3A . .97 ?
C3 H3B . .97 ?
C4 C5 . 1.484(9) y
C4 H4A . .97 ?
C4 H4B . .97 ?
C5 N2 . 1.459(8) y
C5 H5A . .97 ?
C5 H5B . .97 ?
N2 H2C . .89 ?
N2 H2D . .89 ?
N2 H2E . .89 ?
loop_
_geom_hbond_atom_site_label_D
_geom_hbond_atom_site_label_H
_geom_hbond_atom_site_label_A
_geom_hbond_site_symmetry_A
_geom_hbond_distance_DH
_geom_hbond_distance_HA
_geom_hbond_distance_DA
_geom_hbond_angle_DHA
O2 H2 O4 3_675 .82 1.67 2.457(4) 159.1
N1 H1A O2 3_665 .89 2.00 2.885(5) 176.6
N1 H1B O6 . .89 1.89 2.745(5) 161.8
N1 H1C O7 2_545 .89 1.86 2.727(5) 162.8
N2 H2C O6 1_655 .89 1.88 2.750(5) 164.8
N2 H2D O4 2_645 .89 2.05 2.869(5) 153.3
N2 H2E O7 1_655 .89 1.98 2.861(6) 170.9
_cod_database_code 1000000