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#! /bin/sh
#!perl -w # --*- Perl -*--
eval 'exec perl -x $0 ${1+"$@"}'
if 0;
#------------------------------------------------------------------------------
#$Author: antanas $
#$Date: 2020-09-29 10:54:47 +0300 (Tue, 29 Sep 2020) $
#$Revision: 8533 $
#$URL: svn+ssh://www.crystallography.net/home/coder/svn-repositories/cod-tools/tags/v3.7.0/scripts/dic2markdown $
#------------------------------------------------------------------------------
#*
#* Generate textual descriptions for DDLm dictionaries.
#*
#* USAGE:
#* $0 --options input1.dic input*.dic
#**
use strict;
use warnings;
use COD::CIF::DDL qw( cif_to_ddlm ddl1_to_ddlm );
use COD::CIF::DDL::DDLm qw( get_definition_class );
use COD::CIF::Parser qw( parse_cif );
use COD::CIF::Tags::Manage qw( cifversion );
use COD::SOptions qw( getOptions get_value );
use COD::SUsage qw( usage options );
use COD::ErrorHandler qw( process_warnings
process_errors
process_parser_messages );
use COD::UserMessage qw( sprint_message );
use COD::ToolsVersion qw( get_version_string );
use HTML::Entities qw( encode_entities );
sub unprefix($);
sub escape($);
sub mark_hyperlinks($);
my $use_parser = 'c';
my $additional_head_text;
my $add_anchors = 1;
#* OPTIONS:
#* --use-perl-parser
#* Use Perl parser for CIF parsing.
#* --use-c-parser
#* Use Perl & C parser for CIF parsing (default).
#*
#* --append-head-text
#* Read Markdown text from a file and append it to
#* the dictionary overview text, just before
#* enumerating the categories in the dictionary.
#*
#* --add-anchors
#* Add HTML anchors for headings (default).
#* --no-add-anchors
#* --dont-add-anchors
#* Do not add HTML anchors for headings.
#*
#* --help, --usage
#* Output a short usage message (this message) and exit.
#* --version
#* Output version information and exit.
#**
@ARGV = getOptions(
"--use-perl-parser" => sub { $use_parser = "perl" },
"--use-c-parser" => sub { $use_parser = "c" },
"--append-head-text" => sub { open( my $inp, get_value() );
$additional_head_text =
join '', <$inp>;
close $inp },
"--add-anchors" => sub { $add_anchors = 1 },
"--no-add-anchors" => sub { $add_anchors = 0 },
"--dont-add-anchors" => sub { $add_anchors = 0 },
'--options' => sub { options; exit },
'--help,--usage' => sub { usage; exit },
'--version' => sub { print get_version_string(), "\n"; exit }
);
my $die_on_errors = 1;
my $die_on_warnings = 0;
my $die_on_notes = 0;
my $die_on_error_level = {
ERROR => $die_on_errors,
WARNING => $die_on_warnings,
NOTE => $die_on_notes
};
@ARGV = ('-') unless @ARGV;
for my $filename (@ARGV) {
my $options = { 'parser' => $use_parser, 'no_print' => 1 };
my ( $data, $err_count, $messages ) = parse_cif( $filename, $options );
process_parser_messages( $messages, $die_on_error_level );
if ( !@{$data} ) {
warn sprint_message( {
'program' => $0,
'filename' => $filename,
'err_level' => 'WARNING',
'message' => 'the file contains no data blocks'
} );
next;
}
if( !cifversion( $data->[0] ) || cifversion( $data->[0] ) !~ /^2\./ ) {
if( exists $data->[0]{values}{'_dictionary_name'} ||
exists $data->[0]{values}{'_dictionary.title'} ) {
local $SIG{__WARN__} = sub {
process_warnings( {
'message' => @_,
'program' => $0,
'filename' => $filename,
}, $die_on_error_level );
};
$data = [ ddl1_to_ddlm( $data, { keep_original_date => 1 } ) ];
process_warnings( {
message => 'apparently DDL1 dictionary was encountered, ' .
'converting it to DDLm; the conversion is ' .
'experimental and may result in corruption ' .
'or loss of dictionary data',
program => $0,
filename => $filename,
}, $die_on_error_level );
} else { # plain CIF file
local $SIG{__WARN__} = sub {
process_warnings( {
'message' => @_,
'program' => $0,
'filename' => $filename,
'add_pos' => 'data_' . $data->[0]{'name'},
}, $die_on_error_level );
};
$data = [ cif_to_ddlm( $data->[0] ) ];
process_warnings( {
message => 'apparently a plain CIF file was encountered, ' .
'converting it to DDLm; the conversion is ' .
'experimental',
program => $0,
filename => $filename,
}, $die_on_error_level );
}
}
for my $datablock (@$data) {
my $dataname = 'data_' . $datablock->{'name'};
local $SIG{__WARN__} = sub {
process_warnings( {
'message' => @_,
'program' => $0,
'filename' => $filename,
'add_pos' => $dataname
}, $die_on_error_level )
};
eval {
my $dict = build_dictionary_structure( $datablock );
printf "# %s\n\n",
escape( $datablock->{values}{'_dictionary.title'}[0] );
printf "Version: %s (%s)\n\n",
escape( $datablock->{values}{'_dictionary.version'}[0] ),
escape( $datablock->{values}{'_dictionary.date'}[0] );
print "$additional_head_text\n\n" if $additional_head_text;
dic_block2markdown( $dict,
{ indent => 1,
add_anchors => $add_anchors,
save_blocks => $datablock->{save_blocks} } );
};
if( $@ ) {
process_errors( {
'message' => $@,
'program' => $0,
'filename' => $filename,
'add_pos' => $dataname
}, $die_on_errors )
}
}
}
# Constructs CIF DDLm dictionary relation tree for easier detection of
# dependencies.
sub build_dictionary_structure
{
my( $dataset ) = @_;
my $parents = {};
for my $save_block (@{$dataset->{save_blocks}}) {
if( !exists $save_block->{values}{'_name.category_id'} ) {
if( get_definition_class($save_block) ne 'Head' ) {
warn "save block '$save_block->{name}' does not contain " .
'\'_name.category_id\' data item -- unable to ' .
'determine its ancestry, skipping' . "\n";
}
next;
}
my $parent = lc $save_block->{values}{'_name.category_id'}[0];
push @{$parents->{$parent}}, $save_block;
}
my @heads = grep { get_definition_class($_) eq 'Head' }
@{$dataset->{save_blocks}};
my $dict = {};
$dict->{content} = $heads[0];
find_children( $dict, $parents );
return $dict;
}
sub find_children
{
my( $node, $parents ) = @_;
my $children = $parents->{lc $node->{content}{values}{'_definition.id'}[0]};
return if !$children;
foreach (@$children) {
my $new_node = { content => $_ };
find_children( $new_node, $parents );
push @{$node->{children}}, $new_node;
}
}
sub dic_block2markdown
{
my( $node, $options ) = @_;
$options = {} unless $options;
my $indent = $options->{indent};
$indent = 0 unless defined $indent;
my $add_anchors = $options->{add_anchors};
my $values = $node->{content}{values};
my $definition_class = get_definition_class($node->{content});
if( $definition_class eq 'Attribute' ||
$definition_class eq 'Datum' ) {
$indent++;
}
if( $definition_class ne 'Head' ) {
local $\ = "\n\n";
my $title = $values->{'_definition.id'}[0];
my $anchor = '';
if( $options->{add_anchors} ) {
$anchor = '<a name="' . encode_entities( $title ) . '"></a>';
}
print '#' x ($indent + 1) . ' ', $anchor, escape $title;
if( exists $values->{'_description.text'} ) {
my $description = mark_hyperlinks escape unprefix
$values->{'_description.text'}[0];
if( $add_anchors ) {
$description = mark_internal_links( $description,
$options->{save_blocks} );
}
print $description;
}
if( exists $values->{'_units.code'} ) {
print 'Units: ', escape $values->{'_units.code'}[0];
}
local $\ = "\n";
if( exists $values->{'_enumeration_set.state'} &&
exists $values->{'_enumeration_set.detail'} ) {
print "Values:\n\n",
"<table>\n <tr><th>Value</th><th>Description</th></tr>";
for my $i (0..$#{$values->{'_enumeration_set.state'}}) {
print ' <tr><td>' . encode_entities(
unprefix( $values->{'_enumeration_set.state'}[$i] ) ) .
'</td><td>' . encode_entities(
mark_hyperlinks unprefix $values->{'_enumeration_set.detail'}[$i] ) .
"</td></tr>";
}
print '</table>';
} elsif( exists $values->{'_enumeration_set.state'} ) {
print "Values:\n\n", map { '* ' . escape( $_ ). "\n" }
@{$values->{'_enumeration_set.state'}};
}
if( exists $values->{'_enumeration.default'} ) {
printf "Default value: '%s'\n\n", $values->{'_enumeration.default'}[0];
}
if( exists $values->{'_description_example.case'} &&
exists $values->{'_description_example.detail'} ) {
print "Examples:\n\n",
"<table>\n <tr><th>Value</th><th>Description</th></tr>";
for my $i (0..$#{$values->{'_description_example.case'}}) {
print ' <tr><td>';
my $example = encode_entities(
unprefix $values->{'_description_example.case'}[$i] );
print '<pre><code>' if $example =~ /\n/;
print $example;
print '</code></pre>' if $example =~ /\n/;
print ' </td><td>', encode_entities(
mark_hyperlinks unprefix $values->{'_description_example.detail'}[$i] );
print ' </td></tr>';
}
print '</table>';
}
}
foreach (@{$node->{children}}) {
dic_block2markdown( $_,
{ indent => $indent,
add_anchors => $options->{add_anchors},
save_blocks => $options->{save_blocks} } );
}
}
sub unprefix($)
{
my( $text ) = @_;
$text =~ s/^\s*\n//;
my( $prefix ) = $text =~ /^( +)/;
return $text if !$prefix;
my $len = length $prefix;
$text =~ s/^ {$len}//gm;
return $text;
}
sub escape($)
{
my( $text ) = @_;
# Escaping Markdown:
$text =~ s/([_*])/\\$1/g;
# Escaping HTML:
$text = encode_entities( $text );
return $text;
}
sub mark_hyperlinks($)
{
my( $text ) = @_;
$text =~ s/(https?:\/\/[^\s\(\)]+)(\.?)/[$1]($1)$2/g;
return $text;
}
sub mark_tag_if_found
{
my( $tag, $save_blocks ) = @_;
my $clean_tag = $tag;
$clean_tag =~ s/\\_/_/g;
my $search_tag = $clean_tag;
$search_tag =~ s/^_//;
if( grep { $_->{name} eq $search_tag } @$save_blocks ) {
return "[$tag](#$clean_tag)";
} else {
return $tag;
}
}
sub mark_internal_links
{
my( $text, $save_blocks ) = @_;
$text =~ s/([A-Z]*((\\_|\.)[a-zA-Z\-]+)+)/"" . mark_tag_if_found( $1, $save_blocks )/egx;
return $text;
}
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