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// Copyright 2011 The Go Authors. All rights reserved.
// Use of this source code is governed by a BSD-style
// license that can be found in the LICENSE file.
package index
import (
"io"
"io/ioutil"
"log"
"os"
"strings"
"unsafe"
"github.com/google/codesearch/sparse"
)
// Index writing. See read.go for details of on-disk format.
//
// It would suffice to make a single large list of (trigram, file#) pairs
// while processing the files one at a time, sort that list by trigram,
// and then create the posting lists from subsequences of the list.
// However, we do not assume that the entire index fits in memory.
// Instead, we sort and flush the list to a new temporary file each time
// it reaches its maximum in-memory size, and then at the end we
// create the final posting lists by merging the temporary files as we
// read them back in.
//
// It would also be useful to be able to create an index for a subset
// of the files and then merge that index into an existing one. This would
// allow incremental updating of an existing index when a directory changes.
// But we have not implemented that.
// An IndexWriter creates an on-disk index corresponding to a set of files.
type IndexWriter struct {
LogSkip bool // log information about skipped files
Verbose bool // log status using package log
trigram *sparse.Set // trigrams for the current file
buf [8]byte // scratch buffer
paths []string
nameData *bufWriter // temp file holding list of names
nameLen uint32 // number of bytes written to nameData
nameIndex *bufWriter // temp file holding name index
numName int // number of names written
totalBytes int64
post []postEntry // list of (trigram, file#) pairs
postFile []*os.File // flushed post entries
postIndex *bufWriter // temp file holding posting list index
inbuf []byte // input buffer
main *bufWriter // main index file
}
const npost = 64 << 20 / 8 // 64 MB worth of post entries
// Create returns a new IndexWriter that will write the index to file.
func Create(file string) *IndexWriter {
return &IndexWriter{
trigram: sparse.NewSet(1 << 24),
nameData: bufCreate(""),
nameIndex: bufCreate(""),
postIndex: bufCreate(""),
main: bufCreate(file),
post: make([]postEntry, 0, npost),
inbuf: make([]byte, 16384),
}
}
// A postEntry is an in-memory (trigram, file#) pair.
type postEntry uint64
func (p postEntry) trigram() uint32 {
return uint32(p >> 32)
}
func (p postEntry) fileid() uint32 {
return uint32(p)
}
func makePostEntry(trigram, fileid uint32) postEntry {
return postEntry(trigram)<<32 | postEntry(fileid)
}
// Tuning constants for detecting text files.
// A file is assumed not to be text files (and thus not indexed)
// if it contains an invalid UTF-8 sequences, if it is longer than maxFileLength
// bytes, if it contains a line longer than maxLineLen bytes,
// or if it contains more than maxTextTrigrams distinct trigrams.
const (
maxFileLen = 1 << 30
maxLineLen = 2000
maxTextTrigrams = 20000
)
// AddPaths adds the given paths to the index's list of paths.
func (ix *IndexWriter) AddPaths(paths []string) {
ix.paths = append(ix.paths, paths...)
}
// AddFile adds the file with the given name (opened using os.Open)
// to the index. It logs errors using package log.
func (ix *IndexWriter) AddFile(name string) {
f, err := os.Open(name)
if err != nil {
log.Print(err)
return
}
defer f.Close()
ix.Add(name, f)
}
// Add adds the file f to the index under the given name.
// It logs errors using package log.
func (ix *IndexWriter) Add(name string, f io.Reader) {
ix.trigram.Reset()
var (
c = byte(0)
i = 0
buf = ix.inbuf[:0]
tv = uint32(0)
n = int64(0)
linelen = 0
)
for {
tv = (tv << 8) & (1<<24 - 1)
if i >= len(buf) {
n, err := f.Read(buf[:cap(buf)])
if n == 0 {
if err != nil {
if err == io.EOF {
break
}
log.Printf("%s: %v\n", name, err)
return
}
log.Printf("%s: 0-length read\n", name)
return
}
buf = buf[:n]
i = 0
}
c = buf[i]
i++
tv |= uint32(c)
if n++; n >= 3 {
ix.trigram.Add(tv)
}
if !validUTF8((tv>>8)&0xFF, tv&0xFF) {
if ix.LogSkip {
log.Printf("%s: invalid UTF-8, ignoring\n", name)
}
return
}
if n > maxFileLen {
if ix.LogSkip {
log.Printf("%s: too long, ignoring\n", name)
}
return
}
if linelen++; linelen > maxLineLen {
if ix.LogSkip {
log.Printf("%s: very long lines, ignoring\n", name)
}
return
}
if c == '\n' {
linelen = 0
}
}
if ix.trigram.Len() > maxTextTrigrams {
if ix.LogSkip {
log.Printf("%s: too many trigrams, probably not text, ignoring\n", name)
}
return
}
ix.totalBytes += n
if ix.Verbose {
log.Printf("%d %d %s\n", n, ix.trigram.Len(), name)
}
fileid := ix.addName(name)
for _, trigram := range ix.trigram.Dense() {
if len(ix.post) >= cap(ix.post) {
ix.flushPost()
}
ix.post = append(ix.post, makePostEntry(trigram, fileid))
}
}
// Flush flushes the index entry to the target file.
func (ix *IndexWriter) Flush() {
ix.addName("")
var off [5]uint32
ix.main.writeString(magic)
off[0] = ix.main.offset()
for _, p := range ix.paths {
ix.main.writeString(p)
ix.main.writeString("\x00")
}
ix.main.writeString("\x00")
off[1] = ix.main.offset()
copyFile(ix.main, ix.nameData)
off[2] = ix.main.offset()
ix.mergePost(ix.main)
off[3] = ix.main.offset()
copyFile(ix.main, ix.nameIndex)
off[4] = ix.main.offset()
copyFile(ix.main, ix.postIndex)
for _, v := range off {
ix.main.writeUint32(v)
}
ix.main.writeString(trailerMagic)
os.Remove(ix.nameData.name)
for _, f := range ix.postFile {
os.Remove(f.Name())
}
os.Remove(ix.nameIndex.name)
os.Remove(ix.postIndex.name)
log.Printf("%d data bytes, %d index bytes", ix.totalBytes, ix.main.offset())
ix.main.flush()
}
func copyFile(dst, src *bufWriter) {
dst.flush()
_, err := io.Copy(dst.file, src.finish())
if err != nil {
log.Fatalf("copying %s to %s: %v", src.name, dst.name, err)
}
}
// addName adds the file with the given name to the index.
// It returns the assigned file ID number.
func (ix *IndexWriter) addName(name string) uint32 {
if strings.Contains(name, "\x00") {
log.Fatalf("%q: file has NUL byte in name", name)
}
ix.nameIndex.writeUint32(ix.nameData.offset())
ix.nameData.writeString(name)
ix.nameData.writeByte(0)
id := ix.numName
ix.numName++
return uint32(id)
}
// flushPost writes ix.post to a new temporary file and
// clears the slice.
func (ix *IndexWriter) flushPost() {
w, err := ioutil.TempFile("", "csearch-index")
if err != nil {
log.Fatal(err)
}
if ix.Verbose {
log.Printf("flush %d entries to %s", len(ix.post), w.Name())
}
sortPost(ix.post)
// Write the raw ix.post array to disk as is.
// This process is the one reading it back in, so byte order is not a concern.
data := (*[npost * 8]byte)(unsafe.Pointer(&ix.post[0]))[:len(ix.post)*8]
if n, err := w.Write(data); err != nil || n < len(data) {
if err != nil {
log.Fatal(err)
}
log.Fatalf("short write writing %s", w.Name())
}
ix.post = ix.post[:0]
w.Seek(0, 0)
ix.postFile = append(ix.postFile, w)
}
// mergePost reads the flushed index entries and merges them
// into posting lists, writing the resulting lists to out.
func (ix *IndexWriter) mergePost(out *bufWriter) {
var h postHeap
log.Printf("merge %d files + mem", len(ix.postFile))
for _, f := range ix.postFile {
h.addFile(f)
}
sortPost(ix.post)
h.addMem(ix.post)
npost := 0
e := h.next()
offset0 := out.offset()
for {
npost++
offset := out.offset() - offset0
trigram := e.trigram()
ix.buf[0] = byte(trigram >> 16)
ix.buf[1] = byte(trigram >> 8)
ix.buf[2] = byte(trigram)
// posting list
fileid := ^uint32(0)
nfile := uint32(0)
out.write(ix.buf[:3])
for ; e.trigram() == trigram && trigram != 1<<24-1; e = h.next() {
out.writeUvarint(e.fileid() - fileid)
fileid = e.fileid()
nfile++
}
out.writeUvarint(0)
// index entry
ix.postIndex.write(ix.buf[:3])
ix.postIndex.writeUint32(nfile)
ix.postIndex.writeUint32(offset)
if trigram == 1<<24-1 {
break
}
}
}
// A postChunk represents a chunk of post entries flushed to disk or
// still in memory.
type postChunk struct {
e postEntry // next entry
m []postEntry // remaining entries after e
}
const postBuf = 4096
// A postHeap is a heap (priority queue) of postChunks.
type postHeap struct {
ch []*postChunk
}
func (h *postHeap) addFile(f *os.File) {
data := mmapFile(f).d
m := (*[npost]postEntry)(unsafe.Pointer(&data[0]))[:len(data)/8]
h.addMem(m)
}
func (h *postHeap) addMem(x []postEntry) {
h.add(&postChunk{m: x})
}
// step reads the next entry from ch and saves it in ch.e.
// It returns false if ch is over.
func (h *postHeap) step(ch *postChunk) bool {
old := ch.e
m := ch.m
if len(m) == 0 {
return false
}
ch.e = postEntry(m[0])
m = m[1:]
ch.m = m
if old >= ch.e {
panic("bad sort")
}
return true
}
// add adds the chunk to the postHeap.
// All adds must be called before the first call to next.
func (h *postHeap) add(ch *postChunk) {
if len(ch.m) > 0 {
ch.e = ch.m[0]
ch.m = ch.m[1:]
h.push(ch)
}
}
// empty reports whether the postHeap is empty.
func (h *postHeap) empty() bool {
return len(h.ch) == 0
}
// next returns the next entry from the postHeap.
// It returns a postEntry with trigram == 1<<24 - 1 if h is empty.
func (h *postHeap) next() postEntry {
if len(h.ch) == 0 {
return makePostEntry(1<<24-1, 0)
}
ch := h.ch[0]
e := ch.e
m := ch.m
if len(m) == 0 {
h.pop()
} else {
ch.e = m[0]
ch.m = m[1:]
h.siftDown(0)
}
return e
}
func (h *postHeap) pop() *postChunk {
ch := h.ch[0]
n := len(h.ch) - 1
h.ch[0] = h.ch[n]
h.ch = h.ch[:n]
if n > 1 {
h.siftDown(0)
}
return ch
}
func (h *postHeap) push(ch *postChunk) {
n := len(h.ch)
h.ch = append(h.ch, ch)
if len(h.ch) >= 2 {
h.siftUp(n)
}
}
func (h *postHeap) siftDown(i int) {
ch := h.ch
for {
j1 := 2*i + 1
if j1 >= len(ch) {
break
}
j := j1
if j2 := j1 + 1; j2 < len(ch) && ch[j1].e >= ch[j2].e {
j = j2
}
if ch[i].e < ch[j].e {
break
}
ch[i], ch[j] = ch[j], ch[i]
i = j
}
}
func (h *postHeap) siftUp(j int) {
ch := h.ch
for {
i := (j - 1) / 2
if i == j || ch[i].e < ch[j].e {
break
}
ch[i], ch[j] = ch[j], ch[i]
j = i
}
}
// A bufWriter is a convenience wrapper: a closeable bufio.Writer.
type bufWriter struct {
name string
file *os.File
buf []byte
tmp [8]byte
}
// bufCreate creates a new file with the given name and returns a
// corresponding bufWriter. If name is empty, bufCreate uses a
// temporary file.
func bufCreate(name string) *bufWriter {
var (
f *os.File
err error
)
if name != "" {
f, err = os.OpenFile(name, os.O_RDWR|os.O_CREATE|os.O_TRUNC, 0600)
} else {
f, err = ioutil.TempFile("", "csearch")
}
if err != nil {
log.Fatal(err)
}
return &bufWriter{
name: f.Name(),
buf: make([]byte, 0, 256<<10),
file: f,
}
}
func (b *bufWriter) write(x []byte) {
n := cap(b.buf) - len(b.buf)
if len(x) > n {
b.flush()
if len(x) >= cap(b.buf) {
if _, err := b.file.Write(x); err != nil {
log.Fatalf("writing %s: %v", b.name, err)
}
return
}
}
b.buf = append(b.buf, x...)
}
func (b *bufWriter) writeByte(x byte) {
if len(b.buf) >= cap(b.buf) {
b.flush()
}
b.buf = append(b.buf, x)
}
func (b *bufWriter) writeString(s string) {
n := cap(b.buf) - len(b.buf)
if len(s) > n {
b.flush()
if len(s) >= cap(b.buf) {
if _, err := b.file.WriteString(s); err != nil {
log.Fatalf("writing %s: %v", b.name, err)
}
return
}
}
b.buf = append(b.buf, s...)
}
// offset returns the current write offset.
func (b *bufWriter) offset() uint32 {
off, _ := b.file.Seek(0, 1)
off += int64(len(b.buf))
if int64(uint32(off)) != off {
log.Fatalf("index is larger than 4GB")
}
return uint32(off)
}
func (b *bufWriter) flush() {
if len(b.buf) == 0 {
return
}
_, err := b.file.Write(b.buf)
if err != nil {
log.Fatalf("writing %s: %v", b.name, err)
}
b.buf = b.buf[:0]
}
// finish flushes the file to disk and returns an open file ready for reading.
func (b *bufWriter) finish() *os.File {
b.flush()
f := b.file
f.Seek(0, 0)
return f
}
func (b *bufWriter) writeTrigram(t uint32) {
if cap(b.buf)-len(b.buf) < 3 {
b.flush()
}
b.buf = append(b.buf, byte(t>>16), byte(t>>8), byte(t))
}
func (b *bufWriter) writeUint32(x uint32) {
if cap(b.buf)-len(b.buf) < 4 {
b.flush()
}
b.buf = append(b.buf, byte(x>>24), byte(x>>16), byte(x>>8), byte(x))
}
func (b *bufWriter) writeUvarint(x uint32) {
if cap(b.buf)-len(b.buf) < 5 {
b.flush()
}
switch {
case x < 1<<7:
b.buf = append(b.buf, byte(x))
case x < 1<<14:
b.buf = append(b.buf, byte(x|0x80), byte(x>>7))
case x < 1<<21:
b.buf = append(b.buf, byte(x|0x80), byte(x>>7|0x80), byte(x>>14))
case x < 1<<28:
b.buf = append(b.buf, byte(x|0x80), byte(x>>7|0x80), byte(x>>14|0x80), byte(x>>21))
default:
b.buf = append(b.buf, byte(x|0x80), byte(x>>7|0x80), byte(x>>14|0x80), byte(x>>21|0x80), byte(x>>28))
}
}
// validUTF8 reports whether the byte pair can appear in a
// valid sequence of UTF-8-encoded code points.
func validUTF8(c1, c2 uint32) bool {
switch {
case c1 < 0x80:
// 1-byte, must be followed by 1-byte or first of multi-byte
return c2 < 0x80 || 0xc0 <= c2 && c2 < 0xf8
case c1 < 0xc0:
// continuation byte, can be followed by nearly anything
return c2 < 0xf8
case c1 < 0xf8:
// first of multi-byte, must be followed by continuation byte
return 0x80 <= c2 && c2 < 0xc0
}
return false
}
// sortPost sorts the postentry list.
// The list is already sorted by fileid (bottom 32 bits)
// and the top 8 bits are always zero, so there are only
// 24 bits to sort. Run two rounds of 12-bit radix sort.
const sortK = 12
var sortTmp []postEntry
var sortN [1 << sortK]int
func sortPost(post []postEntry) {
if len(post) > len(sortTmp) {
sortTmp = make([]postEntry, len(post))
}
tmp := sortTmp[:len(post)]
const k = sortK
for i := range sortN {
sortN[i] = 0
}
for _, p := range post {
r := uintptr(p>>32) & (1<<k - 1)
sortN[r]++
}
tot := 0
for i, count := range sortN {
sortN[i] = tot
tot += count
}
for _, p := range post {
r := uintptr(p>>32) & (1<<k - 1)
o := sortN[r]
sortN[r]++
tmp[o] = p
}
tmp, post = post, tmp
for i := range sortN {
sortN[i] = 0
}
for _, p := range post {
r := uintptr(p>>(32+k)) & (1<<k - 1)
sortN[r]++
}
tot = 0
for i, count := range sortN {
sortN[i] = tot
tot += count
}
for _, p := range post {
r := uintptr(p>>(32+k)) & (1<<k - 1)
o := sortN[r]
sortN[r]++
tmp[o] = p
}
}
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