File: GraphColoringInterface.cpp

package info (click to toggle)
colpack 1.0.10-7
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 10,700 kB
  • sloc: cpp: 49,807; ansic: 1,231; makefile: 419; sh: 13
file content (558 lines) | stat: -rw-r--r-- 14,277 bytes parent folder | download | duplicates (5)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
/************************************************************************************
    Copyright (C) 2005-2008 Assefaw H. Gebremedhin, Arijit Tarafdar, Duc Nguyen,
    Alex Pothen

    This file is part of ColPack.

    ColPack is free software: you can redistribute it and/or modify
    it under the terms of the GNU Lesser General Public License as published
    by the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.

    ColPack is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    GNU Lesser General Public License for more details.

    You should have received a copy of the GNU Lesser General Public License
    along with ColPack.  If not, see <http://www.gnu.org/licenses/>.
************************************************************************************/

#include "ColPackHeaders.h"

using namespace std;

namespace ColPack
{

	GraphColoringInterface::GraphColoringInterface(int i_type, ...)
	{
	  //cout<<"IN GraphColoringInterface(int i_type, ...)"<<endl;
		Clear();

		if (i_type == SRC_WAIT) return;

		//---------CONVERT INPUT TO ColPack's GRAPH-------------
		va_list ap; /*will point to each unnamed argument in turn*/
		va_start(ap,i_type); /* point to first element after i_type*/

		if (i_type == SRC_MEM_ADOLC) {
		  //get unsigned int ** uip2_HessianSparsityPattern, int i_RowCount
		  unsigned int ** uip2_HessianSparsityPattern = va_arg(ap,unsigned int **);
		  int i_RowCount = va_arg(ap,int);

#ifdef	_COLPACK_CHECKPOINT_
		  string s_postfix = "-GraphColoringInterface_Constructor";
		  //cout<<"*WriteMatrixMarket_ADOLCInput("<<s_postfix<<", 0, uip2_HessianSparsityPattern, "<< i_RowCount <<", " << i_RowCount  <<endl;
		  WriteMatrixMarket_ADOLCInput(s_postfix, 0, uip2_HessianSparsityPattern, i_RowCount, i_RowCount);
#endif
		  BuildGraphFromRowCompressedFormat(uip2_HessianSparsityPattern, i_RowCount);
		}
		else if (i_type == SRC_MEM_ADIC) {
		  //!!! add interface function that takes input from ADIC
		  cerr<<"ERR: GraphColoringInterface(): s_inputSource \"ADIC\" is not supported yet"<<endl;

		  va_end(ap); /*cleanup*/
		  return;
		}
		else if (i_type == SRC_FILE) {
		  // get string s_InputFile, string s_fileFormat
		  string s_InputFile ( va_arg(ap,char *) );
		  string s_fileFormat ( va_arg(ap,char *) );

		  ReadAdjacencyGraph(s_InputFile, s_fileFormat);
		}
		else {
		  cerr<<"ERR: GraphColoringInterface(): i_type =\""<< i_type <<"\" unknown or unspecified"<<endl;

		  va_end(ap); /*cleanup*/
		  return;
		}
#ifdef	_COLPACK_CHECKPOINT_
		string s_OutputFile = "-ColPack_debug.mtx";
		s_OutputFile = "GraphColoringInterface-InternalGraph"+s_OutputFile;
		WriteMatrixMarket(s_OutputFile);
#endif

		//cout<<"START PrintGraph()"<<endl;
		//PrintGraph();
		//cout<<"END"<<endl;
/*
		// get string s_OrderingVariant
		string s_OrderingVariant( va_arg(ap,char *) );
		if (s_OrderingVariant.compare("WAIT") == 0) {
		  va_end(ap); //cleanup
		  return;
		}

		//---------ORDERING-------------
		m_T_Timer.Start();

		int i_OrderingStatus = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();
		//PrintVertexOrdering();
		//Pause();

		if(i_OrderingStatus != _TRUE)
		{
			cerr<<endl<<"*ERROR: "<<s_OrderingVariant<<" Ordering Failed"<<endl;
			return;
		}

		// get string s_ColoringVariant
		string s_ColoringVariant( va_arg(ap,char *) );
		s_ColoringVariant = toUpper(s_ColoringVariant);
		if (s_ColoringVariant.compare("WAIT") == 0) {
		  va_end(ap); //cleanup
		  return;
		}

		//---------COLORING-------------
		m_T_Timer.Start();

		if(s_ColoringVariant == "DISTANCE_ONE") DistanceOneColoring();
		else if (s_ColoringVariant == "ACYCLIC") AcyclicColoring();
		else if (s_ColoringVariant == "STAR") StarColoring();
		else if (s_ColoringVariant == "RESTRICTED_STAR") RestrictedStarColoring();
		else if (s_ColoringVariant == "DISTANCE_TWO") DistanceTwoColoring();
		else {
			cerr<<endl<<"*ERROR: Unknown Coloring Method "<<s_ColoringVariant<<". Please use a legal Coloring Method."<<endl;
			return;
		}

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

//*/
		va_end(ap); //cleanup
		return;
	}

	int GraphColoringInterface::CalculateVertexColorClasses() {
	    return GraphColoring::CalculateVertexColorClasses();
	}

	void GraphColoringInterface::GetOrderedVertices(vector<int> &output) {
	  GraphOrdering::GetOrderedVertices(output);
	}

	double** GraphColoringInterface::GetSeedMatrix(int* ip1_SeedRowCount, int* ip1_SeedColumnCount) {
	    return GraphColoring::GetSeedMatrix(ip1_SeedRowCount, ip1_SeedColumnCount);
	}

	//Public Destructor 1602
	GraphColoringInterface::~GraphColoringInterface()
	{
		Clear();

		Seed_reset();
	}

	//Virtual Function 1603
	void GraphColoringInterface::Clear()
	{
		GraphColoring::Clear();

		return;
	}

	//Public Function 1604
	int GraphColoringInterface::DistanceOneColoring(string s_OrderingVariant)
	{
		m_T_Timer.Start();

		int i_OrderingStatus = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();

		if(i_OrderingStatus != _TRUE)
		{
			cerr<<endl;
			cerr<<s_OrderingVariant<<" Ordering Failed";
			cerr<<endl;

			return(1);
		}

		m_T_Timer.Start();

		int i_ColoringStatus = GraphColoring::DistanceOneColoring();

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

		return(i_ColoringStatus);
	}

	//Public Function 1605
	int GraphColoringInterface::DistanceTwoColoring(string s_OrderingVariant)
	{
		m_T_Timer.Start();

		int i_OrderingStatus = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();

		if(i_OrderingStatus != _TRUE)
		{
			cerr<<endl;
			cerr<<s_OrderingVariant<<" Ordering Failed";
			cerr<<endl;

			return(1);
		}

		m_T_Timer.Start();

		int i_ColoringStatus = GraphColoring::DistanceTwoColoring();

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

		return(i_ColoringStatus);
	}

	//Public Function 1606
	int GraphColoringInterface::NaiveStarColoring(string s_OrderingVariant)
	{
		m_T_Timer.Start();

		int i_OrderingStatus = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();

		if(i_OrderingStatus != _TRUE)
		{
			cerr<<endl;
			cerr<<s_OrderingVariant<<" Ordering Failed";
			cerr<<endl;

			return(1);
		}

		m_T_Timer.Start();

		int i_ColoringStatus = GraphColoring::NaiveStarColoring();

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

		return(i_ColoringStatus);
	}

	//Public Function 1607
	int GraphColoringInterface::RestrictedStarColoring(string s_OrderingVariant)
	{
		m_T_Timer.Start();

		int i_OrderingVariant = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();

		if(i_OrderingVariant != _TRUE)
		{
			cerr<<endl;
			cerr<<s_OrderingVariant<<" Ordering Failed";
			cerr<<endl;

			return(_TRUE);
		}

		m_T_Timer.Start();

		int i_ColoringStatus = GraphColoring::RestrictedStarColoring();

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

		return(i_ColoringStatus);
	}

	//Public Function 1608
	int GraphColoringInterface::StarColoring(string s_OrderingVariant)
	{
		m_T_Timer.Start();

		int i_OrderingStatus = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();

		if(i_OrderingStatus != _TRUE)
		{
			cerr<<endl;
			cerr<<s_OrderingVariant<<" Ordering Failed";
			cerr<<endl;

			return(1);
		}

		m_T_Timer.Start();

		int i_ColoringStatus = GraphColoring::StarColoring();

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

		return(i_ColoringStatus);
	}

	//Public Function 1609
	int GraphColoringInterface::AcyclicColoring_ForIndirectRecovery(string s_OrderingVariant)
	{
		m_T_Timer.Start();

		int i_OrderingStatus = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();

		if(i_OrderingStatus != _TRUE)
		{
			cerr<<endl;
			cerr<<s_OrderingVariant<<" Ordering Failed";
			cerr<<endl;

			return(1);
		}

		m_T_Timer.Start();

		int i_ColoringStatus = GraphColoring::AcyclicColoring_ForIndirectRecovery();

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

		return(i_ColoringStatus);
	}

	//Public Function 1609
	int GraphColoringInterface::AcyclicColoring(string s_OrderingVariant)
	{
		m_T_Timer.Start();

		int i_OrderingStatus = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();

		if(i_OrderingStatus != _TRUE)
		{
			cerr<<endl;
			cerr<<s_OrderingVariant<<" Ordering Failed";
			cerr<<endl;

			return(1);
		}

		m_T_Timer.Start();

		int i_ColoringStatus = GraphColoring::AcyclicColoring();

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

		return(i_ColoringStatus);
	}

	//Public Function 1610
	int GraphColoringInterface::TriangularColoring(string s_OrderingVariant)
	{
		m_T_Timer.Start();

		int i_OrderingStatus = OrderVertices(s_OrderingVariant);

		m_T_Timer.Stop();

		m_d_OrderingTime = m_T_Timer.GetWallTime();

		if(i_OrderingStatus != _TRUE)
		{
			cerr<<endl;
			cerr<<s_OrderingVariant<<" Ordering Failed";
			cerr<<endl;

			return(1);
		}

		m_T_Timer.Start();

		int i_ColoringStatus = GraphColoring::TriangularColoring();

		m_T_Timer.Stop();

		m_d_ColoringTime = m_T_Timer.GetWallTime();

		return(i_ColoringStatus);
	}


	//void GraphColoringInterface::GenerateSeedHessian(unsigned int ** uip2_HessianSparsityPattern, int i_RowCount, double*** dp3_seed, int *ip1_SeedRowCount, int *ip1_SeedColumnCount, string s_OrderingVariant, string s_ColoringVariant) {
	void GraphColoringInterface::GenerateSeedHessian(double*** dp3_seed, int *ip1_SeedRowCount, int *ip1_SeedColumnCount, string s_OrderingVariant, string s_ColoringVariant) {
		//Clear (Re-initialize) the graph
		//Clear();

		//Read the sparsity pattern of the given Hessian matrix (compressed sparse rows format)
		//and create the corresponding graph
		//BuildGraphFromRowCompressedFormat(uip2_HessianSparsityPattern, i_RowCount);
		//PrintGraphStructure();

		//Color the bipartite graph with the specified ordering
		if (s_ColoringVariant=="DISTANCE_TWO"
			|| s_ColoringVariant=="RESTRICTED_STAR"
			|| s_ColoringVariant=="STAR"
			|| s_ColoringVariant=="ACYCLIC_FOR_INDIRECT_RECOVERY")
		{
			Coloring(s_OrderingVariant, s_ColoringVariant);
		}
		else {
			cerr<<"Error: Unrecognized coloring method."<<endl;
			return;
		}

		//Create the seed matrix from the coloring information
		(*dp3_seed) = GetSeedMatrix(ip1_SeedRowCount, ip1_SeedColumnCount);

		/*
		PrintVertexColors();
		PrintVertexColoringMetrics();
		double **Seed = *dp3_seed;
		int rows = GetVertexCount();
		int cols = GetVertexColorCount();
		cout<<"Seed matrix: ("<<rows<<","<<cols<<")"<<endl;
		for(int i=0; i<rows; i++) {
			for(int j=0; j<cols; j++) {
				cout<<setw(6)<<Seed[i][j];
			}
			cout<<endl;
		}
		//*/
	}

	void GraphColoringInterface::GenerateSeedHessian_unmanaged(double*** dp3_seed, int *ip1_SeedRowCount, int *ip1_SeedColumnCount, string s_OrderingVariant, string s_ColoringVariant) {

		//Color the bipartite graph with the specified ordering
		if (s_ColoringVariant=="DISTANCE_TWO"
			|| s_ColoringVariant=="RESTRICTED_STAR"
			|| s_ColoringVariant=="STAR"
			|| s_ColoringVariant=="ACYCLIC_FOR_INDIRECT_RECOVERY")
		{
			Coloring(s_OrderingVariant, s_ColoringVariant);
		}
		else {
			cerr<<"Error: Unrecognized coloring method."<<endl;
			return;
		}

		//Create the seed matrix from the coloring information
		(*dp3_seed) = GetSeedMatrix_unmanaged(ip1_SeedRowCount, ip1_SeedColumnCount);
	}

	void GraphColoringInterface::PrintVertexEdgeMap(vector<int> &vi_Vertices, vector<int> &vi_Edges , map< int, map< int, int> > &mimi2_VertexEdgeMap) {

		cout<<endl;
		cout<<"DEBUG | Acyclic Coloring | Edge Vertex Map"<<endl;
		cout<<endl;

		int i_VertexCount = vi_Vertices.size() - 1;

		for(int i=0; i<i_VertexCount; i++)
		{
			for(int j=vi_Vertices[i]; j<vi_Vertices[STEP_UP(i)]; j++)
			{
				if(i < vi_Edges[j])
				{
				cout<<"Edge "<<STEP_UP(mimi2_VertexEdgeMap[i][vi_Edges[j]])<<"\t"<<" : "<<STEP_UP(i)<<" - "<<STEP_UP(vi_Edges[j])<<endl;
				}
			}
		}

		cout<<endl;
	}

	void GraphColoringInterface::PrintInducedVertexDegrees(int SetID, int i_HighestInducedVertexDegree, vector< list<int> > &vli_GroupedInducedVertexDegrees) {

		int k;

		list<int>::iterator lit_ListIterator;

		cout<<endl;
		cout<<"DEBUG 5103 | Hessian Evaluation | Induced Vertex Degrees | Set "<<STEP_UP(SetID)<<endl;
		cout<<endl;

		for(int j=0; j<STEP_UP(i_HighestInducedVertexDegree); j++)
		{
			int i_SetSize = (signed) vli_GroupedInducedVertexDegrees[j].size();

			if(i_SetSize == _FALSE)
			{
				continue;
			}

			k = _FALSE;

			cout<<"Degree "<<j<<"\t"<<" : ";

			for(lit_ListIterator=vli_GroupedInducedVertexDegrees[j].begin(); lit_ListIterator!=vli_GroupedInducedVertexDegrees[j].end(); lit_ListIterator++)
			{
				if(k == STEP_DOWN(i_SetSize))
				{
					cout<<STEP_UP(*lit_ListIterator)<<" ("<<i_SetSize<<")"<<endl;
				}
				else
				{
					cout<<STEP_UP(*lit_ListIterator)<<", ";
				}

				k++;
			}
		}

	}

	int GraphColoringInterface::Coloring(string s_OrderingVariant, string s_ColoringVariant) {
		if(s_ColoringVariant == "DISTANCE_ONE") {
			return DistanceOneColoring(s_OrderingVariant);
		} else if (s_ColoringVariant == "ACYCLIC") {
			return AcyclicColoring(s_OrderingVariant);
		} else if (s_ColoringVariant == "ACYCLIC_FOR_INDIRECT_RECOVERY") {
			return AcyclicColoring_ForIndirectRecovery(s_OrderingVariant);
		} else if (s_ColoringVariant == "STAR") {
			return StarColoring(s_OrderingVariant);
		} else if (s_ColoringVariant == "RESTRICTED_STAR") {
			return RestrictedStarColoring(s_OrderingVariant);
		} else if (s_ColoringVariant == "DISTANCE_TWO") {
			return DistanceTwoColoring(s_OrderingVariant);
		} else {
			cout<<" Unknown Coloring Method "<<s_ColoringVariant<<". Please use a legal Coloring Method."<<endl;
			return (_FALSE);
		}

		return (_TRUE);
	}
	int GraphColoringInterface::GetVertexColorCount(){
		return GraphColoring::GetVertexColorCount();
	}
}