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import os, sys, argparse, logging
from scipy.io import mmread
# change if you use a different dir
sys.path.append('/opt/cray/pe/petsc/3.11.2.0/real/GNU64/8.2/haswell/lib/petsc/bin')
import PetscBinaryIO
parser = argparse.ArgumentParser()
parser.add_argument('matrix')
parser.add_argument('-o', '--outfile')
args = parser.parse_args()
# logging setup
logging.basicConfig(stream=sys.stdout,
format='%(asctime)s ::: %(levelname)s ::: %(filename)s ::: '
'%(funcName)s ::: line %(lineno)d ::: %(message)s',
level=logging.INFO)
A = mmread(args.matrix)
outfile = args.matrix.replace('.mtx', '.petsc')
if (args.outfile != None):
outfile = args.outfile
PetscBinaryIO.PetscBinaryIO().writeMatSciPy(open(outfile,'w'), A)
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