1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573
|
from textwrap import dedent
import numpy as np
import inspect
import ast
import importlib
import warnings
import time
from pytools import memoize
from .config import get_config
from .cython_generator import CythonGenerator
from .transpiler import Transpiler, BUILTINS
from .types import (dtype_to_ctype, get_declare_info,
dtype_to_knowntype, annotate, BITS, KnownType)
from .extern import Extern
from .utils import getsourcelines
from .profile import profile
from . import array
from . import parallel
def memoize_kernel(key=lambda *args: args):
def memoize_deco(method):
def wrapper(*args):
f = args[0].func
key_val = key(*args)
if not hasattr(f, 'cached_kernel'):
setattr(f, 'cached_kernel', {key_val: method(*args)})
elif key_val not in f.cached_kernel:
f.cached_kernel[key_val] = method(*args)
return f.cached_kernel[key_val]
return wrapper
return memoize_deco
def get_ctype_from_arg(arg, backend=None):
if isinstance(arg, array.Array):
return arg.gptr_type
elif isinstance(arg, np.ndarray) or isinstance(arg, np.floating):
return dtype_to_ctype(arg.dtype, backend=backend)
else:
if isinstance(arg, float):
return 'double'
else:
if arg > 2147483648:
return 'long long' if BITS.startswith('32') else 'long'
else:
return 'int'
def kernel_cache_key_args(obj, *args):
key = [get_ctype_from_arg(arg, backend=obj.backend) for arg in args]
key.append(obj.func)
key.append(obj.name)
return tuple(key + list(parallel.get_common_cache_key(obj)))
def kernel_cache_key_kwargs(obj, **kwargs):
key = [get_ctype_from_arg(arg, backend=obj.backend)
for arg in kwargs.values()]
key.append(obj.input_func)
key.append(obj.output_func)
key.append(obj.scan_expr)
return tuple(key + list(parallel.get_common_cache_key(obj)))
def getargspec(f):
try:
getargspec_f = inspect.getfullargspec
except AttributeError:
# compatibility with Python 2.7
getargspec_f = inspect.getargspec
return getargspec_f(f)[0]
def get_signed_type(a):
return a[1:] if a.startswith('u') else a
def get_binop_return_type(a, b):
int_types = ['short', 'int', 'long']
float_types = ['float', 'double']
if a is None or b is None:
return None
if a.endswith('p') and get_signed_type(b) in int_types:
return a
if b.endswith('p') and get_signed_type(a) in int_types:
return b
preference_order = int_types + float_types
unsigned_a = unsigned_b = False
if a.startswith('u'):
unsigned_a = True
a = a[1:]
if b.startswith('u'):
unsigned_b = True
b = b[1:]
idx_a = preference_order.index(a)
idx_b = preference_order.index(b)
return_type = preference_order[idx_a] if idx_a > idx_b else \
preference_order[idx_b]
if unsigned_a and unsigned_b:
return_type = 'u%s' % return_type
return return_type
class AnnotationHelper(ast.NodeVisitor):
def __init__(self, func, arg_types):
self.func = func
self.name = self.func.__name__
self.arg_types = {name: self.get_declare_type(type_str)
for name, type_str in arg_types.items()}
self.var_types = self.arg_types.copy()
self.undecl_var_types = {}
self.external_funcs = {}
self.external_missing_decl = {}
self.warning_msg = ('''
Function called is not marked by the annotate decorator. Argument
type defaulting to 'double'. If the type is not 'double', store
the value in a variable of appropriate type and use the variable
''')
def get_declare_type(self, type_str):
kind, address_space, ctype, shape = get_declare_info(type_str)
if 'unsigned' in ctype:
ctype = ctype.replace('unsigned ', 'u')
if kind == 'matrix':
ctype = '%sp' % ctype
return ctype
def get_missing_declarations(self, undecl_var_types):
declarations = {}
for var_name, dtype in undecl_var_types.items():
declarations[var_name] = '%s %s;' % (dtype, var_name)
missing_decl = {self.func.__name__: declarations}
missing_decl.update(self.external_missing_decl)
return missing_decl
def record_var_type(self, name, dtype):
self.var_types[name] = self.get_declare_type(dtype)
def record_undecl_var_type(self, name, dtype):
if name not in self.var_types and name not in self.undecl_var_types:
self.undecl_var_types[name] = self.get_declare_type(dtype)
def get_var_type(self, name):
return self.var_types.get(
name, self.undecl_var_types.get(name, 'double'))
def get_return_type(self):
if getattr(self.func, 'is_jit', False):
return self.arg_types.get('return_', 'double')
else:
annotations = getattr(self.func, '__annotations__', {})
return annotations.get('return', KnownType('double')).type
def annotate(self):
if getattr(self.func, 'is_jit', False):
src = dedent('\n'.join(getsourcelines(self.func)[0]))
self._src = src.splitlines()
code = ast.parse(src)
self.visit(code)
self.func = annotate(self.func, **self.arg_types)
return self.get_missing_declarations(self.undecl_var_types)
def recursive_annotate(self, f, node):
arg_types = {}
f_arg_names = getargspec(f)
for f_arg, arg in zip(f_arg_names, node.args):
arg_type = self.visit(arg)
if not arg_type:
arg_type = 'double'
arg_types[f_arg] = arg_type
f_helper = AnnotationHelper(f, arg_types)
self.external_missing_decl.update(f_helper.annotate())
self.external_funcs[node.func.id] = f_helper
return f_helper
def error(self, message, node):
msg = '\nError in code in line %d:\n' % node.lineno
if self._src: # pragma: no branch
if node.lineno > 1: # pragma no branch
msg += self._src[node.lineno - 2] + '\n'
msg += self._src[node.lineno - 1] + '\n'
msg += ' ' * node.col_offset + '^' + '\n\n'
msg += message
raise NotImplementedError(msg)
def warn(self, message, node):
msg = '\nIn code in line %d:\n' % node.lineno
if self._src: # pragma: no branch
if node.lineno > 1: # pragma no branch
msg += self._src[node.lineno - 2] + '\n'
msg += self._src[node.lineno - 1] + '\n'
msg += ' ' * node.col_offset + '^' + '\n\n'
msg += message
warnings.warn(msg)
def visit_declare(self, node):
if not isinstance(node.args[0], ast.Str):
self.error("Argument to declare should be a string.", node)
type_str = node.args[0].s
return self.get_declare_type(type_str)
def visit_cast(self, node):
if not isinstance(node.args[1], ast.Str):
self.error("Cast type should be a string.", node)
return node.args[1].s
def visit_address(self, node):
base_type = self.visit(node.args[0])
if base_type.endswith('p'):
self.error("Cannot find address of a pointer", node)
if isinstance(node.args[0], ast.Subscript):
array_type = self.visit(node.args[0].value)
if array_type.startswith('g'):
base_type = 'g' + base_type
return base_type + 'p'
def visit_For(self, node):
self.record_undecl_var_type(node.target.id, 'int')
for stmt in node.body:
self.visit(stmt)
def visit_IfExp(self, node):
return self.visit(node.body)
def visit_Call(self, node):
# FIXME: External functions have to be at the module level
# for this to work. Pass list of external functions to
# make this work
if node.func.id == 'annotate':
return
mod = importlib.import_module(self.func.__module__)
f = getattr(mod, node.func.id, None)
if node.func.id == 'declare':
return self.visit_declare(node)
if node.func.id == 'cast':
return self.visit_cast(node)
if node.func.id == 'atomic_inc':
return self.visit(node.args[0])
if node.func.id == 'atomic_dec':
return self.visit(node.args[0])
if node.func.id == 'address':
return self.visit_address(node)
if node.func.id in self.external_funcs:
return self.external_funcs[node.func.id].get_return_type()
if isinstance(node.func, ast.Name) and node.func.id not in BUILTINS:
if f is None or isinstance(f, Extern):
self.warn("%s could not be found or is an external function"
"and cannot be handled by JIT" % node.func.id)
return 'double'
else:
f_helper = self.recursive_annotate(f, node)
return f_helper.get_return_type()
self.warn(dedent(self.warning_msg), node.func)
return 'double'
def visit_Subscript(self, node):
base_type = self.visit(node.value)
if base_type.startswith('g'):
base_type = base_type[1:]
return base_type[:-1]
def visit_Name(self, node):
return self.get_var_type(node.id)
def visit_Assign(self, node):
if len(node.targets) != 1:
self.error("Assignments can have only one target.", node)
left, right = node.targets[0], node.value
right_type = self.visit(right)
if isinstance(right, ast.Call) and right.func.id == 'declare':
if isinstance(left, ast.Name):
self.record_var_type(left.id, right_type)
elif isinstance(left, ast.Tuple):
names = [x.id for x in left.elts]
for name in names:
self.record_var_type(name, right_type)
elif isinstance(left, ast.Name):
self.record_undecl_var_type(left.id, right_type)
def visit_Compare(self, node):
return 'int'
def visit_BinOp(self, node):
if isinstance(node.op, ast.Pow):
return self.visit(node.left)
else:
return get_binop_return_type(self.visit(node.left),
self.visit(node.right))
def visit_Num(self, node):
return get_ctype_from_arg(node.n)
def visit_UnaryOp(self, node):
return self.visit(node.operand)
def visit_Return(self, node):
if node and node.value:
result_type = self.visit(node.value)
if result_type:
self.arg_types['return_'] = result_type
return result_type
class ElementwiseJIT(parallel.ElementwiseBase):
def __init__(self, func, backend=None):
backend = array.get_backend(backend)
self.tp = Transpiler(backend=backend)
self.backend = backend
self.name = 'elwise_%s' % func.__name__
self.func = func
self._config = get_config()
self.cython_gen = CythonGenerator()
self.source = '# Code jitted, call the function to generate the code.'
self.all_source = self.source
if backend == 'opencl':
from .opencl import get_context, get_queue
self.queue = get_queue()
def get_type_info_from_args(self, *args):
type_info = {}
arg_names = getargspec(self.func)
if 'i' in arg_names:
arg_names.remove('i')
type_info['i'] = 'int'
for arg, name in zip(args, arg_names):
arg_type = get_ctype_from_arg(arg, backend=self.backend)
if not arg_type:
arg_type = 'double'
type_info[name] = arg_type
return type_info
@memoize_kernel(key=kernel_cache_key_args)
def _generate_kernel(self, *args):
if self.func is not None:
arg_types = self.get_type_info_from_args(*args)
helper = AnnotationHelper(self.func, arg_types)
declarations = helper.annotate()
self.func = helper.func
return self._generate(declarations=declarations)
def _massage_arg(self, x):
if isinstance(x, array.Array):
return x.dev
elif self.backend != 'cuda' or isinstance(x, np.ndarray):
return x
else:
return np.asarray(x)
@profile
def __call__(self, *args, **kw):
c_func = self._generate_kernel(*args)
c_args = [self._massage_arg(x) for x in args]
if self.backend == 'cython':
size = len(c_args[0])
c_args.insert(0, size)
c_func(*c_args, **kw)
elif self.backend == 'opencl':
c_func(*c_args, **kw)
self.queue.finish()
elif self.backend == 'cuda':
import pycuda.driver as drv
event = drv.Event()
c_func(*c_args, **kw)
event.record()
event.synchronize()
class ReductionJIT(parallel.ReductionBase):
def __init__(self, reduce_expr, map_func=None, dtype_out=np.float64,
neutral='0', backend='cython'):
backend = array.get_backend(backend)
self.tp = Transpiler(backend=backend)
self.backend = backend
self.func = map_func
if map_func is not None:
self.name = 'reduce_' + map_func.__name__
else:
self.name = 'reduce'
self.reduce_expr = reduce_expr
self.dtype_out = dtype_out
self.type = dtype_to_ctype(dtype_out, backend)
if backend == 'cython':
# On Windows, INFINITY is not defined so we use INFTY which we
# internally define.
self.neutral = neutral.replace('INFINITY', 'INFTY')
else:
self.neutral = neutral
self._config = get_config()
self.cython_gen = CythonGenerator()
self.source = '# Code jitted, call the function to generate the code.'
self.all_source = self.source
if backend == 'opencl':
from .opencl import get_context, get_queue
self.queue = get_queue()
def get_type_info_from_args(self, *args):
type_info = {}
arg_names = getargspec(self.func)
if 'i' in arg_names:
arg_names.remove('i')
type_info['i'] = 'int'
for arg, name in zip(args, arg_names):
arg_type = get_ctype_from_arg(arg, backend=self.backend)
if not arg_type:
arg_type = 'double'
type_info[name] = arg_type
return type_info
@memoize_kernel(key=kernel_cache_key_args)
def _generate_kernel(self, *args):
if self.func is not None:
arg_types = self.get_type_info_from_args(*args)
helper = AnnotationHelper(self.func, arg_types)
declarations = helper.annotate()
self.func = helper.func
return self._generate(declarations=declarations)
def _massage_arg(self, x):
if isinstance(x, array.Array):
return x.dev
elif self.backend != 'cuda' or isinstance(x, np.ndarray):
return x
else:
return np.asarray(x)
@profile
def __call__(self, *args, **kw):
c_func = self._generate_kernel(*args)
c_args = [self._massage_arg(x) for x in args]
if self.backend == 'cython':
size = len(c_args[0])
c_args.insert(0, size)
return c_func(*c_args, **kw)
elif self.backend == 'opencl':
result = c_func(*c_args, **kw)
self.queue.finish()
return result.get()
elif self.backend == 'cuda':
import pycuda.driver as drv
event = drv.Event()
result = c_func(*c_args, **kw)
event.record()
event.synchronize()
return result.get()
class ScanJIT(parallel.ScanBase):
def __init__(self, input=None, output=None, scan_expr="a+b",
is_segment=None, dtype=np.float64, neutral='0',
complex_map=False, backend='opencl'):
backend = array.get_backend(backend)
self.tp = Transpiler(backend=backend, incl_cluda=False)
self.backend = backend
self.input_func = input
self.output_func = output
self.is_segment_func = is_segment
self.complex_map = complex_map
if input is not None:
self.name = 'scan_' + input.__name__
else:
self.name = 'scan'
self.scan_expr = scan_expr
self.dtype = dtype
self.type = dtype_to_ctype(dtype, backend)
if backend == 'cython':
# On Windows, INFINITY is not defined so we use INFTY which we
# internally define.
self.neutral = neutral.replace('INFINITY', 'INFTY')
else:
self.neutral = neutral
self._config = get_config()
self.source = '# Code jitted, call the function to generate the code.'
self.all_source = self.source
self.cython_gen = CythonGenerator()
if backend == 'opencl':
from .opencl import get_context, get_queue
self.queue = get_queue()
builtin_symbols = ['item', 'prev_item', 'last_item']
self.builtin_types = {'i': 'int', 'N': 'int'}
for sym in builtin_symbols:
self.builtin_types[sym] = dtype_to_knowntype(
self.dtype, backend=backend
)
def get_type_info_from_kwargs(self, func, **kwargs):
type_info = {}
arg_names = getargspec(func)
for name in arg_names:
arg = kwargs.get(name, None)
if arg is None and name not in self.builtin_types:
raise ValueError("Argument %s not found" % name)
if name in self.builtin_types:
arg_type = self.builtin_types[name]
else:
arg_type = get_ctype_from_arg(arg, backend=self.backend)
if not arg_type:
arg_type = 'double'
type_info[name] = arg_type
return type_info
@memoize(key=kernel_cache_key_kwargs, use_kwargs=True)
def _generate_kernel(self, **kwargs):
declarations = {}
if self.input_func is not None:
arg_types = self.get_type_info_from_kwargs(
self.input_func, **kwargs)
arg_types['return_'] = dtype_to_knowntype(
self.dtype, backend=self.backend
)
helper = AnnotationHelper(self.input_func, arg_types)
declarations.update(helper.annotate())
self.input_func = helper.func
if self.output_func is not None:
arg_types = self.get_type_info_from_kwargs(
self.output_func, **kwargs)
helper = AnnotationHelper(self.output_func, arg_types)
declarations.update(helper.annotate())
self.output_func = helper.func
if self.is_segment_func is not None:
arg_types = self.get_type_info_from_kwargs(
self.is_segment_func, **kwargs)
arg_types['return_'] = 'int'
helper = AnnotationHelper(self.is_segment_func, arg_types)
declarations.update(helper.annotate())
self.is_segment_func = helper.func
return self._generate(declarations=declarations)
def _massage_arg(self, x):
if isinstance(x, array.Array):
return x.dev
elif self.backend != 'cuda' or isinstance(x, np.ndarray):
return x
else:
return np.asarray(x)
@profile
def __call__(self, **kwargs):
c_func = self._generate_kernel(**kwargs)
c_args_dict = {k: self._massage_arg(x) for k, x in kwargs.items()}
if self._get_backend_key() in self.output_func.arg_keys:
output_arg_keys = self.output_func.arg_keys[
self._get_backend_key()]
else:
raise ValueError("No kernel arguments found for backend = %s, "
"use_openmp = %s, use_double = %s" %
self._get_backend_key())
if self.backend == 'cython':
size = len(c_args_dict[output_arg_keys[1]])
c_args_dict['SIZE'] = size
c_func(*[c_args_dict[k] for k in output_arg_keys])
elif self.backend == 'opencl':
c_func(*[c_args_dict[k] for k in output_arg_keys])
self.queue.finish()
elif self.backend == 'cuda':
import pycuda.driver as drv
event = drv.Event()
c_func(*[c_args_dict[k] for k in output_arg_keys])
event.record()
event.synchronize()
|