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#ifndef COOT_ALIGN_UTIL_HH
#define COOT_ALIGN_UTIL_HH
/*
* utils/align-utils.hh
*
* Copyright 2009 by University of Oxford
* Author: Paul Emsley
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as published
* by the Free Software Foundation; either version 3 of the License, or (at
* your option) any later version.
*
* This program is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
* 02110-1301, USA
*/
#include <string>
namespace coot {
std::string alignment_matches(const std::string &aligned,
const std::string &target); // strings with - in them
}
#endif // COOT_ALIGN_UTIL_HH
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