1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157
|
&GLOBAL
PRINT_LEVEL LOW
PROJECT bias_template
RUN_TYPE MC
&END GLOBAL
&MOTION
&MC
ENSEMBLE TRADITIONAL
ETA 0.0
IPRINT 1
LBIAS no
LSTOP no
NMOVES 1
NSTEP 1
PRESSURE 1.013
RESTART no
RESTART_FILE_NAME mc_restartb_1
TEMPERATURE 398.0
VIRIAL_TEMPS 300.0
&AVBMC
AVBMC_ATOM 1
AVBMC_RMAX 5.0
AVBMC_RMIN 1.0
PBIAS 0.5
&END AVBMC
&MAX_DISPLACEMENTS
&BOX_DISPLACEMENTS
RMVOLUME 500.0
&END BOX_DISPLACEMENTS
&MOL_DISPLACEMENTS
RMANGLE 3.0
RMBOND 0.074
RMDIHEDRAL 3.0
RMROT 26.0
RMTRANS 0.38
&END MOL_DISPLACEMENTS
&END MAX_DISPLACEMENTS
&MOVE_PROBABILITIES
PMAVBMC 0.0
PMHMC 0.0
PMSWAP 0.0
PMTRAION 0.20
PMTRANS 0.75
PMVOLUME 0.0
&BOX_PROBABILITIES
PMHMC_BOX 1.0
PMVOL_BOX 1.0
&END BOX_PROBABILITIES
&MOL_PROBABILITIES
PMAVBMC_MOL 1.0
PMROT_MOL 1.0
PMSWAP_MOL 1.0
PMTRAION_MOL 1.0
PMTRANS_MOL 1.0
&END MOL_PROBABILITIES
&END MOVE_PROBABILITIES
&MOVE_UPDATES
IUPTRANS 100
IUPVOLUME 100
&END MOVE_UPDATES
&END MC
&END MOTION
&FORCE_EVAL
METHOD FIST
&MM
&FORCEFIELD
&BEND
ATOMS H O H
K 0.0
THETA0 1.82422
&END BEND
&BOND
ATOMS O H
K 0.0
R0 1.844
&END BOND
&CHARGE
ATOM O
CHARGE -0.8476
&END CHARGE
&CHARGE
ATOM H
CHARGE 0.4238
&END CHARGE
&NONBONDED
&LENNARD-JONES
ATOMS O O
EPSILON 78.19580
RCUT 5.480
SIGMA 3.1655
&END LENNARD-JONES
&LENNARD-JONES
ATOMS O H
EPSILON 0.0
RCUT 5.480
SIGMA 3.1655
&END LENNARD-JONES
&LENNARD-JONES
ATOMS H H
EPSILON 0.0
RCUT 5.480
SIGMA 3.1655
&END LENNARD-JONES
&END NONBONDED
&SPLINE
EMAX_SPLINE 1000000.0
&END SPLINE
&END FORCEFIELD
&POISSON
&EWALD
ALPHA 0.25
EWALD_ACCURACY 1.0E-6
EWALD_TYPE ewald
GMAX 25
&END EWALD
&END POISSON
&END MM
&SUBSYS
&CELL
ABC 13.7151207699 13.7151207699 13.7151207699
&END CELL
&COORD
O 11.667599837210 7.964352234664 0.059453614019
H 10.873359634781 8.005423314626 0.665667823055
H 11.364979095795 7.770411108906 -0.873716837951
O 2.314161441602 5.011228167767 2.784706973673
H 1.663128370368 5.686998340596 3.130381117447
H 2.659721328394 5.306531429441 1.893985965664
O 10.262864742466 5.548805003571 11.360725453725
H 10.424041748648 4.666485986338 11.802918991113
H 9.436479204754 5.494708086386 10.800225647804
O 5.937092785694 12.752770338234 7.554822749656
H 6.459679552548 12.731874699056 8.407152758147
H 6.560379344025 12.890048310674 6.784973290144
O 1.052476316752 3.192494253568 0.284763135867
H 1.009686510209 3.892635795528 0.997483876183
H 1.385134340137 3.601676794269 -0.564888471374
O 11.621014134223 7.899470257763 6.835708666826
H 10.723243819476 8.290315257093 7.038806299646
H 12.107936378358 8.496446358905 6.198114886544
O 3.255054397643 5.532098285916 13.500752220167
H 3.169785700155 4.860242146843 12.764995074351
H 3.889107504717 6.253294143532 13.221731148935
&END COORD
&TOPOLOGY
CONNECTIVITY MOL_SET
&MOL_SET
&MOLECULE
CONN_FILE_NAME topology_atoms_WAT.psf
NMOL 7
&END MOLECULE
&END MOL_SET
&END TOPOLOGY
&END SUBSYS
&END FORCE_EVAL
|