File: gly.pot

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cp2k 2025.2-1
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*>>>>>>>   AMBER FF Converted into CHARMM FF style                      <<<<<<<
*>>>>>>>   Generated on :: 20060602 210843.445 +0200 by :: teo          <<<<<<<
*>>>>>>>   pcihpc07                                                     <<<<<<<
*>>>>>>>   Leap Title :: ACE                                            <<<<<<<
*>>>>>>>   Send all comments related to the FFs conversion to           <<<<<<<
*>>>>>>>   teodoro.laino@gmail.com                                      <<<<<<<
 
BONDS
!
!V(bond) = Kb(b - b0)**2
!
!Kb: kcal/mole/A**2
!b0: A
!
!atom type Kb          b0
!
CT1  HC     340.000000000    1.090000000
CT2  H0     340.000000000    1.090000000
N1   H11    434.000000000    1.010000000
CT3  H12    340.000000000    1.090000000
N2   H2     434.000000000    1.010000000
C1   O1     570.000000000    1.229000000
C1   N1     490.000000000    1.335000000
CT1  C1     317.000000000    1.522000000
C2   O2     570.000000000    1.229000000
C2   N2     490.000000000    1.335000000
CT2  C2     317.000000000    1.522000000
N1   CT2    337.000000000    1.449000000
N2   CT3    337.000000000    1.449000000
 
ANGLES
!
!V(angle) = Ktheta(Theta - Theta0)**2
!
!V(Urey-Bradley) = Kub(S - S0)**2
!
!Ktheta: kcal/mole/rad**2
!Theta0: degrees
!Kub: kcal/mole/A**2 (Urey-Bradley)
!S0: A
!
!atom types     Ktheta    Theta0   Kub     S0
!
C1   N1   H11     50.000000000  120.000051429
HC   CT1  C1      50.000000000  109.500046929
HC   CT1  HC      35.000000000  109.500046929
C2   N2   H2      50.000000000  120.000051429
H0   CT2  C2      50.000000000  109.500046929
H0   CT2  H0      35.000000000  109.500046929
H11  N1   CT2     50.000000000  118.040050474
N1   CT2  H0      50.000000000  109.500046929
H12  CT3  H12     35.000000000  109.500046929
H2   N2   CT3     50.000000000  118.040050474
N2   CT3  H12     50.000000000  109.500046929
O1   C1   N1      80.000000000  122.900052672
C1   N1   CT2     50.000000000  121.900052243
CT1  C1   O1      80.000000000  120.400051601
CT1  C1   N1      70.000000000  116.600049972
O2   C2   N2      80.000000000  122.900052672
C2   N2   CT3     50.000000000  121.900052243
CT2  C2   O2      80.000000000  120.400051601
CT2  C2   N2      70.000000000  116.600049972
N1   CT2  C2      63.000000000  110.100047186
 
DIHEDRALS
!
!V(dihedral) = Kchi(1 + cos(n(chi) - delta))
!
!Kchi: kcal/mole
!n: multiplicity
!delta: degrees
!
!atom types             Kchi    n   delta
!
O1   C1   N1   H11      2.000000000    1    0.000000000
O1   C1   N1   H11      2.500000000    2  180.000077144
C1   N1   CT2  H0       0.457500000    1    0.000000000
C1   N1   CT2  H0       1.255800000    2  180.000077144
HC   CT1  C1   O1       0.800000000    1    0.000000000
HC   CT1  C1   O1       0.080000000    3  180.000077144
HC   CT1  C1   N1       0.000000000    2    0.000000000
HC   CT1  C1   O1       0.000000000    2    0.000000000
CT1  C1   N1   H11      2.500000000    2  180.000077144
O2   C2   N2   H2       2.000000000    1    0.000000000
O2   C2   N2   H2       2.500000000    2  180.000077144
C2   N2   CT3  H12      0.000000000    2    0.000000000
H0   CT2  C2   O2       0.000000000    2    0.000000000
H0   CT2  C2   N2       1.060700000    1  180.000077144
H0   CT2  C2   N2       0.011000000    2    0.000000000
CT2  C2   N2   H2       2.500000000    2  180.000077144
H11  N1   CT2  H0       0.000000000    2    0.000000000
H11  N1   CT2  C2       0.000000000    2    0.000000000
H2   N2   CT3  H12      0.000000000    2    0.000000000
O1   C1   N1   CT2      2.500000000    2  180.000077144
C1   N1   CT2  C2       1.015900000    1    0.000000000
C1   N1   CT2  C2       0.345100000    2  180.000077144
C1   N1   CT2  C2       0.225900000    3    0.000000000
CT1  C1   N1   CT2      2.500000000    2  180.000077144
O2   C2   N2   CT3      2.500000000    2  180.000077144
CT2  C2   N2   CT3      2.500000000    2  180.000077144
N1   CT2  C2   O2       0.000000000    2    0.000000000
N1   CT2  C2   N2       0.683900000    1  180.000077144
N1   CT2  C2   N2       1.453700000    2  180.000077144
N1   CT2  C2   N2       0.461500000    3  180.000077144
C1   CT2  N1   H11      1.100000000    2  180.000077144
C2   CT3  N2   H2       1.100000000    2  180.000077144
CT1  N1   C1   O1      10.500000000    2  180.000077144
CT2  N2   C2   O2      10.500000000    2  180.000077144
 
IMPROPER
!
!V(improper) = Kpsi(psi - psi0)**2
!
!Kpsi: kcal/mole/rad**2
!psi0: degrees
!note that the second column of numbers (0) is ignored
!
!atom types           Kpsi                   psi0
!
 
NONBONDED
!
!V(Lennard-Jones) = Eps,i,j[(Rmin,i,j/ri,j)**12 - 2(Rmin,i,j/ri,j)**6]
!
!epsilon: kcal/mole, Eps,i,j = sqrt(eps,i * eps,j)
!Rmin/2: A, Rmin,i,j = Rmin/2,i + Rmin/2,j
!
!atom  ignored    epsilon      Rmin/2   ignored   eps,1-4       Rmin/2,1-4
!
HC       0.000000000    0.015700000    1.487000000
CT1      0.000000000    0.109400000    1.908000000
C1       0.000000000    0.086000000    1.908000000
O1       0.000000000    0.210000000    1.661200000
N1       0.000000000    0.170000000    1.824000000
H11      0.000000000    0.015700000    0.600000000
CT2      0.000000000    0.109400000    1.908000000
H0       0.000000000    0.015700000    1.386999999
C2       0.000000000    0.086000000    1.908000000
O2       0.000000000    0.210000000    1.661200000
N2       0.000000000    0.170000000    1.824000000
H2       0.000000000    0.015700000    0.600000000
CT3      0.000000000    0.109400000    1.908000000
H12      0.000000000    0.015700000    1.386999999
 
END

!
! This Section can be cutted & pasted into the Fist input file..
!
CHARGES
HC       0.112300000
CT1     -0.366200000
C1       0.597200002
O1      -0.567900002
N1      -0.374282000
H11      0.253981000
CT2     -0.128844000
H0       0.088859000
C2       0.580583999
O2      -0.509157000
N2      -0.415700000
H2       0.271900000
CT3     -0.149000000
H12      0.097600000
END CHARGES