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/* $Id: montecarlo.c,v 1.5 2013-04-24 14:14:13 cgarcia Exp $
*
* This file is part of the FORS Data Reduction Pipeline
* Copyright (C) 2002-2010 European Southern Observatory
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
*/
/*
* $Author: cgarcia $
* $Date: 2013-04-24 14:14:13 $
* $Revision: 1.5 $
* $Name: not supported by cvs2svn $
*/
#ifdef HAVE_CONFIG_H
#include <config.h>
#endif
#include <string.h>
#include <cpl.h>
#include <moses.h>
#include <fors_dfs.h>
static int montecarlo_create(cpl_plugin *);
static int montecarlo_exec(cpl_plugin *);
static int montecarlo_destroy(cpl_plugin *);
static int montecarlo(cpl_parameterlist *, cpl_frameset *);
static char montecarlo_description[] =
"This recipe is used to test the mos_montecarlo_polyfit() function.\n"
"It accepts a table with columns x, y, y_err, derives the best polynomial\n"
"fit y = p(x), and produces a table with the polynomial 1-sigma accuracy\n"
"on the given set of x coordinates.\n"
"Input files:\n\n"
" DO category: Type: Explanation: Required:\n"
" TABLE Raw Table to evaluate Y\n\n"
"Output files:\n\n"
" DO category: Data type: Explanation:\n"
" MODEL_ERROR FITS image Model error at different x\n\n";
#define montecarlo_exit(message) \
{ \
if ((const char *)message != NULL) cpl_msg_error(recipe, message); \
cpl_table_delete(table); \
cpl_table_delete(points); \
cpl_table_delete(model_error); \
cpl_polynomial_delete(p); \
cpl_msg_indent_less(); \
return -1; \
}
#define montecarlo_exit_memcheck(message) \
{ \
if ((const char *)message != NULL) cpl_msg_info(recipe, message); \
cpl_table_delete(table); \
cpl_table_delete(points); \
cpl_table_delete(model_error); \
cpl_polynomial_delete(p); \
cpl_msg_indent_less(); \
return 0; \
}
/**
* @brief Build the list of available plugins, for this module.
*
* @param list The plugin list
*
* @return 0 if everything is ok, -1 otherwise
*
* Create the recipe instance and make it available to the application
* using the interface. This function is exported.
*/
int cpl_plugin_get_info(cpl_pluginlist *list)
{
cpl_recipe *recipe = cpl_calloc(1, sizeof *recipe );
cpl_plugin *plugin = &recipe->interface;
cpl_plugin_init(plugin,
CPL_PLUGIN_API,
FORS_BINARY_VERSION,
CPL_PLUGIN_TYPE_RECIPE,
"montecarlo",
"Test function mos_montecarlo_polyfit()",
montecarlo_description,
"Carlo Izzo",
PACKAGE_BUGREPORT,
"This file is currently part of the FORS Instrument Pipeline\n"
"Copyright (C) 2002-2010 European Southern Observatory\n\n"
"This program is free software; you can redistribute it and/or modify\n"
"it under the terms of the GNU General Public License as published by\n"
"the Free Software Foundation; either version 2 of the License, or\n"
"(at your option) any later version.\n\n"
"This program is distributed in the hope that it will be useful,\n"
"but WITHOUT ANY WARRANTY; without even the implied warranty of\n"
"MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\n"
"GNU General Public License for more details.\n\n"
"You should have received a copy of the GNU General Public License\n"
"along with this program; if not, write to the Free Software Foundation,\n"
"Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA\n",
montecarlo_create,
montecarlo_exec,
montecarlo_destroy);
cpl_pluginlist_append(list, plugin);
return 0;
}
/**
* @brief Setup the recipe options
*
* @param plugin The plugin
*
* @return 0 if everything is ok
*
* Defining the command-line/configuration parameters for the recipe.
*/
static int montecarlo_create(cpl_plugin *plugin)
{
cpl_recipe *recipe;
cpl_parameter *p;
/*
* Check that the plugin is part of a valid recipe
*/
if (cpl_plugin_get_type(plugin) == CPL_PLUGIN_TYPE_RECIPE)
recipe = (cpl_recipe *)plugin;
else
return -1;
/*
* Create the parameters list in the cpl_recipe object
*/
recipe->parameters = cpl_parameterlist_new();
/*
* Name of input table columns
*/
p = cpl_parameter_new_value("fors.montecarlo.x",
CPL_TYPE_STRING,
"Name of independent variable column",
"fors.montecarlo",
"x");
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "x");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
p = cpl_parameter_new_value("fors.montecarlo.y",
CPL_TYPE_STRING,
"Name of dependent variable column",
"fors.montecarlo",
"y");
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "y");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
p = cpl_parameter_new_value("fors.montecarlo.sigma",
CPL_TYPE_STRING,
"Name of error column on dependent variable",
"fors.montecarlo",
"");
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "sigma");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
/*
* Order of fitting polynomial
*/
p = cpl_parameter_new_value("fors.montecarlo.order",
CPL_TYPE_INT,
"Order of fitting polynomial",
"fors.montecarlo",
1);
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "order");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
/*
* Origin of x for fit
*/
p = cpl_parameter_new_value("fors.montecarlo.zero",
CPL_TYPE_DOUBLE,
"Origin of x for fit",
"fors.montecarlo",
0.0);
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "zero");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
/*
* Start x for evaluation
*/
p = cpl_parameter_new_value("fors.montecarlo.start",
CPL_TYPE_DOUBLE,
"Start x for evaluation",
"fors.montecarlo",
0.0);
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "start");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
/*
* End x for evaluation
*/
p = cpl_parameter_new_value("fors.montecarlo.end",
CPL_TYPE_DOUBLE,
"End x for evaluation",
"fors.montecarlo",
0.0);
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "end");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
/*
* Evaluation sampling
*/
p = cpl_parameter_new_value("fors.montecarlo.step",
CPL_TYPE_DOUBLE,
"x sampling interval",
"fors.montecarlo",
0.0);
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "step");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
/*
* Statistical sample
*/
p = cpl_parameter_new_value("fors.montecarlo.trials",
CPL_TYPE_INT,
"Size of statistical sample",
"fors.montecarlo",
100);
cpl_parameter_set_alias(p, CPL_PARAMETER_MODE_CLI, "trials");
cpl_parameter_disable(p, CPL_PARAMETER_MODE_ENV);
cpl_parameterlist_append(recipe->parameters, p);
return 0;
}
/**
* @brief Execute the plugin instance given by the interface
*
* @param plugin the plugin
*
* @return 0 if everything is ok
*/
static int montecarlo_exec(cpl_plugin *plugin)
{
cpl_recipe *recipe;
if (cpl_plugin_get_type(plugin) == CPL_PLUGIN_TYPE_RECIPE)
recipe = (cpl_recipe *)plugin;
else
return -1;
return montecarlo(recipe->parameters, recipe->frames);
}
/**
* @brief Destroy what has been created by the 'create' function
*
* @param plugin The plugin
*
* @return 0 if everything is ok
*/
static int montecarlo_destroy(cpl_plugin *plugin)
{
cpl_recipe *recipe;
if (cpl_plugin_get_type(plugin) == CPL_PLUGIN_TYPE_RECIPE)
recipe = (cpl_recipe *)plugin;
else
return -1;
cpl_parameterlist_delete(recipe->parameters);
return 0;
}
/**
* @brief Interpret the command line options and execute the data processing
*
* @param parlist The parameters list
* @param frameset The set-of-frames
*
* @return 0 if everything is ok
*/
static int montecarlo(cpl_parameterlist *parlist, cpl_frameset *frameset)
{
const char *recipe = "montecarlo";
/*
* Input parameters
*/
const char *x;
const char *y;
const char *sigma;
int order;
double start;
double end;
double step;
int trials;
double zero;
/*
* CPL objects
*/
cpl_table *table = NULL;
cpl_table *model_error = NULL;
cpl_table *points = NULL;
cpl_polynomial *p = NULL;
/*
* Auxiliary variables
*/
char *version = "0.1";
char *table_tag = "TABLE";
char *model_error_tag = "MODEL_ERROR";
double *xdata;
int ntables;
int i, count;
cpl_msg_set_indentation(2);
/*
* Get configuration parameters
*/
cpl_msg_info(recipe, "Recipe %s configuration parameters:", recipe);
cpl_msg_indent_more();
x = dfs_get_parameter_string(parlist, "fors.montecarlo.x", NULL);
y = dfs_get_parameter_string(parlist, "fors.montecarlo.y", NULL);
sigma = dfs_get_parameter_string(parlist, "fors.montecarlo.sigma", NULL);
order = dfs_get_parameter_int(parlist, "fors.montecarlo.order", NULL);
if (order < 0)
montecarlo_exit("Invalid polynomial order");
start = dfs_get_parameter_double(parlist, "fors.montecarlo.start", NULL);
end = dfs_get_parameter_double(parlist, "fors.montecarlo.end", NULL);
if (end <= start)
montecarlo_exit("Invalid interval");
step = dfs_get_parameter_double(parlist, "fors.montecarlo.step", NULL);
if (step >= end - start || step <= 0.0)
montecarlo_exit("Invalid step");
trials = dfs_get_parameter_int(parlist, "fors.montecarlo.trials", NULL);
if (trials < 2)
montecarlo_exit("At least 2 trials should be performed");
zero = dfs_get_parameter_double(parlist, "fors.montecarlo.zero", NULL);
if (cpl_error_get_code())
montecarlo_exit("Failure getting the configuration parameters");
ntables = cpl_frameset_count_tags(frameset, table_tag);
if (ntables == 0) {
cpl_msg_error(recipe, "Missing required input: %s", table_tag);
montecarlo_exit(NULL);
}
if (ntables > 1) {
cpl_msg_error(recipe, "Too many in input: %s", table_tag);
montecarlo_exit(NULL);
}
table = dfs_load_table(frameset, table_tag, 1);
points = cpl_table_new(cpl_table_get_nrow(table));
if (cpl_table_has_column(table, x)) {
cpl_table_move_column(points, x, table);
if (!cpl_table_has_column(points, "x")) {
cpl_table_name_column(points, x, "x");
}
}
else {
cpl_msg_error(recipe, "Missing column: %s", x);
montecarlo_exit(NULL);
}
cpl_table_subtract_scalar(points, "x", zero);
if (cpl_table_has_column(table, y)) {
cpl_table_move_column(points, y, table);
if (!cpl_table_has_column(points, "y")) {
cpl_table_name_column(points, y, "y");
}
}
else {
cpl_msg_error(recipe, "Missing column: %s", y);
montecarlo_exit(NULL);
}
if (sigma[0] != '\0') {
if (cpl_table_has_column(table, sigma)) {
cpl_table_move_column(points, sigma, table);
if (!cpl_table_has_column(points, "y_err")) {
cpl_table_name_column(points, sigma, "y_err");
}
}
else {
cpl_msg_error(recipe, "Missing column: %s", sigma);
montecarlo_exit(NULL);
}
}
cpl_table_delete(table); table = NULL;
cpl_table_erase_invalid(points);
count = 1;
while (start + step*count <= end)
count++;
model_error = cpl_table_new(count);
cpl_table_new_column(model_error, "x", CPL_TYPE_DOUBLE);
cpl_table_fill_column_window_double(model_error, "x", 0, count, 0.0);
xdata = cpl_table_get_data_double(model_error, "x");
for (i = 0; i < count; i++)
xdata[i] = start + step*i - zero;
p = mos_montecarlo_polyfit(points, model_error, trials, order);
if (cpl_error_get_code() != CPL_ERROR_NONE) {
cpl_msg_error(recipe, "%s", cpl_error_get_message());
montecarlo_exit(NULL);
}
for (i = 0; i < count; i++)
xdata[i] += zero;
cpl_polynomial_delete(p); p = NULL;
cpl_table_delete(points); points = NULL;
if (dfs_save_table(frameset, model_error, model_error_tag, NULL,
parlist, recipe, version))
montecarlo_exit(NULL);
cpl_table_delete(model_error); model_error = NULL;
return 0;
}
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