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/* *
* This file is part of the ESO UVES Pipeline *
* Copyright (C) 2004,2005 European Southern Observatory *
* *
* This library is free software; you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation; either version 2 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU General Public License for more details. *
* *
* You should have received a copy of the GNU General Public License *
* along with this program; if not, write to the Free Software *
* Foundation, 51 Franklin St, Fifth Floor, Boston, MA 02111-1307 USA *
* */
/*
* $Author: amodigli $
* $Date: 2010-09-24 09:32:07 $
* $Revision: 1.17 $
* $Name: not supported by cvs2svn $
* $Log: not supported by cvs2svn $
* Revision 1.15 2007/12/17 07:56:36 amodigli
* we now compute a clean median as in MIDAS
*
* Revision 1.14 2007/12/03 17:00:14 amodigli
* removed dependency from flames and fixed a warning
*
* Revision 1.13 2007/12/03 10:39:36 amodigli
* added uves_physmod_align_tables flames_align_table_column
*
* Revision 1.12 2007/06/26 15:08:42 amodigli
* commented table dumping
*
* Revision 1.11 2007/06/25 16:34:52 amodigli
* cleaned
*
* Revision 1.10 2007/06/06 08:17:33 amodigli
* replace tab with 4 spaces
*
* Revision 1.9 2006/11/06 15:19:41 jmlarsen
* Removed unused include directives
*
* Revision 1.8 2006/08/24 06:36:10 amodigli
* fixed doxygen warning
*
* Revision 1.7 2006/08/22 14:17:00 amodigli
* fixed bug on computing MedDY
*
* Revision 1.6 2006/08/08 15:41:19 amodigli
* fixed bug in aligning actual and ref tables
*
* Revision 1.5 2006/08/02 07:02:05 amodigli
* stability check more robust: size of actual and ref table may differ
*
* Revision 1.4 2006/07/31 06:29:26 amodigli
* added QC on stability test
*
* Revision 1.3 2006/07/28 14:51:26 amodigli
* fixed some bugs on improper table selection
*
* Revision 1.2 2006/06/28 13:28:29 amodigli
* improved output
*
* Revision 1.1 2006/02/03 07:46:30 jmlarsen
* Moved recipe implementations to ./uves directory
*
* Revision 1.4 2006/01/20 10:36:25 amodigli
*
* Fixed warings from doxigen
*
* Revision 1.3 2006/01/19 08:47:24 jmlarsen
* Inserted missing doxygen end tag
*
* Revision 1.2 2006/01/16 13:52:58 jmlarsen
* Removed memory leak
*
* Revision 1.1 2006/01/16 08:02:50 amodigli
*
* Added
*
* Revision 1.4 2006/01/09 14:05:42 amodigli
* Fixed doxigen warnings
*
* Revision 1.3 2005/12/20 08:11:44 jmlarsen
* Added CVS entry
*
*/
/*----------------------------------------------------------------------------*/
/**
* @addtogroup uves_physmod
*/
/*---------------------------------------------------------------------------*/
/**@{*/
#ifdef HAVE_CONFIG_H
# include <config.h>
#endif
/*-----------------------------------------------------------------------------
Includes
----------------------------------------------------------------------------*/
#include <uves_physmod_stability_check.h>
#include <uves_utils_wrappers.h>
#include <uves_msg.h>
#include <uves_error.h>
/*-----------------------------------------------------------------------------
Defines
----------------------------------------------------------------------------*/
/*-----------------------------------------------------------------------------
Functions prototypes
----------------------------------------------------------------------------*/
/*-----------------------------------------------------------------------------
Static variables
----------------------------------------------------------------------------*/
static int
uves_physmod_align_tables(cpl_table** m_tbl,
cpl_table** r_tbl);
static int
flames_align_table_column(cpl_table** m_tbl,cpl_table** r_tbl,const char* col);
/*-----------------------------------------------------------------------------
Functions code
----------------------------------------------------------------------------*/
/*---------------------------------------------------------------------------*/
/**
@brief This procedure run a stability check
@param m_tbl model table on actual frame.
@param r_tbl model table on reference frame
@param med_dx median shift on X axis
@param med_dy median shift on Y axis
@param avg_dx mean shift on X axis
@param avg_dy mean shift on Y axis
@return 0 if everything is ok, -1 otherwise
This procedure compares values of XMES and YMES columns from check and
reference frames and computes the median of their difference.
*/
/*---------------------------------------------------------------------------*/
int uves_physmod_stability_check(cpl_table* m_tbl,
cpl_table* r_tbl,
double* med_dx,
double* med_dy,
double* avg_dx,
double* avg_dy)
{
cpl_table* tmp_tbl1=NULL;
cpl_table* tmp_tbl2=NULL;
cpl_table* tmp_tbl3=NULL;
cpl_table* tmp_tbl4=NULL;
cpl_table* tmp_tbl5=NULL;
double std_dx=0;
double std_dy=0;
int msz=0;
int rsz=0;
int ref=0;
int status=0; /* note those are swapped */
check_nomsg(cpl_table_duplicate_column(m_tbl,"X",m_tbl,"XMES"));
check_nomsg(cpl_table_duplicate_column(m_tbl,"Y",m_tbl,"YMES"));
check_nomsg(cpl_table_duplicate_column(m_tbl,"S",m_tbl,"STATUS"));
check_nomsg(cpl_table_duplicate_column(m_tbl,"O",m_tbl,"ORDER"));
check_nomsg(cpl_table_duplicate_column(m_tbl,"ID",m_tbl,"IDENT"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"X",r_tbl,"XMES"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"Y",r_tbl,"YMES"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"S",r_tbl,"STATUS"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"O",r_tbl,"ORDER"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"ID",r_tbl,"IDENT"));
check_nomsg(msz=cpl_table_get_nrow(m_tbl));
check_nomsg(rsz=cpl_table_get_nrow(r_tbl));
cpl_table_save(m_tbl, NULL, NULL, "m_tbl.fits", CPL_IO_DEFAULT);
cpl_table_save(r_tbl, NULL, NULL, "r_tbl.fits", CPL_IO_DEFAULT);
if(msz > rsz) {
check_nomsg(cpl_table_set_size(r_tbl,msz));
uves_msg_warning("Actual and reference tables have different sizes: act=%d ref=%d",msz,rsz);
uves_physmod_align_tables(&m_tbl,&r_tbl);
check_nomsg(msz=cpl_table_get_nrow(m_tbl));
check_nomsg(rsz=cpl_table_get_nrow(r_tbl));
uves_msg_warning("After correction actual and reference tables have different sizes: act=%d ref=%d",msz,rsz);
} else if (msz < rsz) {
check_nomsg(cpl_table_set_size(m_tbl,rsz));
uves_msg_warning("Actual and reference tables have different sizes: act=%d ref=%d",msz,rsz);
uves_physmod_align_tables(&m_tbl,&r_tbl);
check_nomsg(msz=cpl_table_get_nrow(m_tbl));
check_nomsg(rsz=cpl_table_get_nrow(r_tbl));
uves_msg_warning("After correction actual and reference tables have different sizes: act=%d ref=%d",msz,rsz);
}
cpl_table_save(m_tbl, NULL, NULL, "after_m_tbl.fits", CPL_IO_DEFAULT);
cpl_table_save(r_tbl, NULL, NULL, "after_r_tbl.fits", CPL_IO_DEFAULT);
/* copy values measured on actual frame into table from reference frame */
check_nomsg(cpl_table_duplicate_column(r_tbl,"Xm",m_tbl,"X"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"Ym",m_tbl,"Y"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"Sm",m_tbl,"S"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"Om",m_tbl,"O"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"IDm",m_tbl,"ID"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"WAVEm",m_tbl,"WAVE"));
/* initialize difference columns with values from actual frame measures */
check_nomsg(cpl_table_duplicate_column(r_tbl,"DX",r_tbl,"Xm"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"DY",r_tbl,"Ym"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"DO",r_tbl,"Om"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"DID",r_tbl,"IDm"));
check_nomsg(cpl_table_duplicate_column(r_tbl,"DW",r_tbl,"WAVEm"));
/* subtract values measured on reference frame */
check_nomsg(cpl_table_subtract_columns(r_tbl,"DX","X"));
check_nomsg(cpl_table_subtract_columns(r_tbl,"DY","Y"));
check_nomsg(cpl_table_subtract_columns(r_tbl,"DO","O"));
check_nomsg(cpl_table_subtract_columns(r_tbl,"DID","ID"));
check_nomsg(cpl_table_subtract_columns(r_tbl,"DW","WAVE"));
/* WE GET THE ABSOLUTE VALUE: sqrt(X^2)*/
check(cpl_table_power_column(r_tbl,"DW",2.),"Error computing power column");
check(cpl_table_power_column(r_tbl,"DW",0.5),"Error computing power column");
/* select proper values */
check(tmp_tbl1=uves_extract_table_rows(r_tbl,"DO",CPL_EQUAL_TO,
0),"Error selecting DO");
check(tmp_tbl2=uves_extract_table_rows(tmp_tbl1,"DW",CPL_LESS_THAN,
0.001),"Error selecting DW");
check(tmp_tbl3=uves_extract_table_rows(tmp_tbl2,"DID",CPL_LESS_THAN,
0.001),"Error selecting DID");
check(tmp_tbl4=uves_extract_table_rows(tmp_tbl3,"S",CPL_EQUAL_TO,
0),"Error selecting S");
check(tmp_tbl5=uves_extract_table_rows(tmp_tbl4,"Sm",CPL_EQUAL_TO,
0),"Error selecting Sm");
check_nomsg(ref=cpl_table_get_nrow(tmp_tbl5)/2);
//cpl_table_dump(tmp_tbl5,1,2,stdout);
check_nomsg(*med_dx=cpl_table_get_column_median(tmp_tbl5,"DX"));
check_nomsg(*med_dy=cpl_table_get_column_median(tmp_tbl5,"DY"));
check_nomsg(*avg_dx=cpl_table_get_column_mean(tmp_tbl5,"DX"));
check_nomsg(*avg_dy=cpl_table_get_column_mean(tmp_tbl5,"DY"));
check_nomsg(std_dx=cpl_table_get_column_stdev(tmp_tbl5,"DX"));
check_nomsg(std_dy=cpl_table_get_column_stdev(tmp_tbl5,"DY"));
/*
uves_msg("Stability check results: Median DX = %5.3f Median DY = %5.3f",
*med_dx,*med_dy);
*/
uves_msg("Stability check results: Mean DX = %5.3f Mean DY = %5.3f",
*avg_dx,*avg_dy);
check_nomsg(uves_sort_table_1(tmp_tbl5,"DX",0));
check_nomsg(*med_dx=cpl_table_get_double(tmp_tbl5,"DX",ref,&status));
uves_free_table(&tmp_tbl1);
uves_free_table(&tmp_tbl2);
if(std_dx > 0) {
check(tmp_tbl1=uves_extract_table_rows(tmp_tbl5,"DX",CPL_GREATER_THAN,
*avg_dx-3*std_dx),"Error selecting DO");
check(tmp_tbl2=uves_extract_table_rows(tmp_tbl1,"DX",CPL_LESS_THAN,
*avg_dx+3*std_dx),"Error selecting DO");
check_nomsg(*med_dx=cpl_table_get_column_median(tmp_tbl2,"DX"));
uves_free_table(&tmp_tbl1);
uves_free_table(&tmp_tbl2);
}
check_nomsg(uves_sort_table_1(tmp_tbl5,"DY",0));
check_nomsg(*med_dy=cpl_table_get_double(tmp_tbl5,"DY",ref,&status));
if(std_dy > 0) {
check(tmp_tbl1=uves_extract_table_rows(tmp_tbl5,"DY",CPL_GREATER_THAN,
*avg_dy-3*std_dy),"Error selecting DO");
check(tmp_tbl2=uves_extract_table_rows(tmp_tbl1,"DY",CPL_LESS_THAN,
*avg_dy+3*std_dy),"Error selecting DO");
check_nomsg(*med_dy=cpl_table_get_column_median(tmp_tbl2,"DY"));
uves_free_table(&tmp_tbl1);
uves_free_table(&tmp_tbl2);
}
/* median computed as in UVES-MIDAS */
uves_msg("Stability check results: Median DX = %5.3f Median DY = %5.3f",
*med_dx,*med_dy);
cleanup:
uves_free_table(&tmp_tbl1);
uves_free_table(&tmp_tbl2);
uves_free_table(&tmp_tbl3);
uves_free_table(&tmp_tbl4);
uves_free_table(&tmp_tbl5);
return 0;
}
/*---------------------------------------------------------------------------*/
/**
@brief This procedure compares two input tables and eventually alignes
them
@param m_tbl model table on actual frame.
@param r_tbl model table on reference frame
@param col reference column
@return 0 if everything is ok, -1 otherwise
*/
/*---------------------------------------------------------------------------*/
static int
flames_align_table_column(cpl_table** m_tbl,cpl_table** r_tbl,const char* col)
{
double* pmw=NULL;
double* prw=NULL;
int* pmc=NULL;
int* prc=NULL;
int* pmo=NULL;
int* pro=NULL;
int nm=0;
int nr=0;
int i=0;
int j=0;
check_nomsg(pmw=cpl_table_get_data_double(*m_tbl,col));
check_nomsg(prw=cpl_table_get_data_double(*r_tbl,col));
check_nomsg(pmc=cpl_table_get_data_int(*m_tbl,"CHECK"));
check_nomsg(prc=cpl_table_get_data_int(*r_tbl,"CHECK"));
check_nomsg(pmo=cpl_table_get_data_int(*m_tbl,"CHECK"));
check_nomsg(pro=cpl_table_get_data_int(*r_tbl,"CHECK"));
check_nomsg(nm=cpl_table_get_nrow(*m_tbl));
check_nomsg(nr=cpl_table_get_nrow(*r_tbl));
for(i=0;i<nm;i++) {
for(j=0;j<nr;j++) {
if((pmw[i]==prw[j]) && (pmo[i]==pro[j])) {
pmc[i]=1;
prc[j]=1;
}
}
}
cleanup:
return 0;
}
/*---------------------------------------------------------------------------*/
/**
@brief This procedure compares two input tables and eventually alignes
them
@param m_tbl model table on actual frame.
@param r_tbl model table on reference frame
@return 0 if everything is ok, -1 otherwise
*/
/*---------------------------------------------------------------------------*/
static int
uves_physmod_align_tables(cpl_table** m_tbl,
cpl_table** r_tbl)
{
cpl_table* tmp=NULL;
uves_propertylist* plist=NULL;
int ord_min=0;
int ord_max=0;
double wav_min=0;
double wav_max=0;
int i=0;
int nm=0;
int nr=0;
int nsel=0;
check_nomsg(nm=cpl_table_get_nrow(*m_tbl));
check_nomsg(nr=cpl_table_get_nrow(*r_tbl));
check_nomsg(plist=uves_propertylist_new());
check_nomsg(uves_propertylist_append_bool(plist,"ORDER",0)); /* 1 for descending order */
check_nomsg(uves_propertylist_append_bool(plist,"WAVE",0)); /* 0 for ascending order */
check_nomsg(uves_table_sort(*m_tbl,plist));
check_nomsg(uves_table_sort(*r_tbl,plist));
uves_free_propertylist(&plist);
ord_min=(cpl_table_get_column_min(*m_tbl,"ORDER")>
cpl_table_get_column_min(*r_tbl,"ORDER")) ?
cpl_table_get_column_min(*m_tbl,"ORDER") :
cpl_table_get_column_min(*r_tbl,"ORDER");
ord_max=(cpl_table_get_column_max(*m_tbl,"ORDER")<
cpl_table_get_column_max(*r_tbl,"ORDER")) ?
cpl_table_get_column_max(*m_tbl,"ORDER") :
cpl_table_get_column_max(*r_tbl,"ORDER");
uves_msg_warning("ord_min=%d",ord_min);
uves_msg_warning("ord_max=%d",ord_max);
wav_min=(cpl_table_get_column_min(*m_tbl,"WAVE")>
cpl_table_get_column_min(*r_tbl,"WAVE")) ?
cpl_table_get_column_min(*m_tbl,"WAVE") :
cpl_table_get_column_min(*r_tbl,"WAVE");
wav_max=(cpl_table_get_column_max(*m_tbl,"WAVE")<
cpl_table_get_column_max(*r_tbl,"WAVE")) ?
cpl_table_get_column_max(*m_tbl,"WAVE") :
cpl_table_get_column_max(*r_tbl,"WAVE");
uves_msg_warning("wav_min=%g",wav_min);
uves_msg_warning("wav_max=%g",wav_max);
check_nomsg(nsel=cpl_table_and_selected_int(*m_tbl,"ORDER",CPL_NOT_LESS_THAN,ord_min));
check_nomsg(nsel=cpl_table_and_selected_int(*m_tbl,"ORDER",CPL_NOT_GREATER_THAN,ord_max));
check_nomsg(nsel=cpl_table_and_selected_double(*m_tbl,"WAVE",CPL_NOT_LESS_THAN,wav_min));
check_nomsg(nsel=cpl_table_and_selected_double(*m_tbl,"WAVE",CPL_NOT_GREATER_THAN,wav_max));
uves_msg_warning("nsel=%d",nsel);
check_nomsg(tmp=cpl_table_extract_selected(*m_tbl));
uves_free_table(m_tbl);
check_nomsg(*m_tbl=cpl_table_duplicate(tmp));
check_nomsg(nsel=cpl_table_and_selected_int(*r_tbl,"ORDER",CPL_NOT_LESS_THAN,ord_min));
check_nomsg(nsel=cpl_table_and_selected_int(*r_tbl,"ORDER",CPL_NOT_GREATER_THAN,ord_max));
check_nomsg(nsel=cpl_table_and_selected_double(*m_tbl,"WAVE",CPL_NOT_LESS_THAN,wav_min));
check_nomsg(nsel=cpl_table_and_selected_double(*m_tbl,"WAVE",CPL_NOT_GREATER_THAN,wav_max));
uves_msg_warning("nsel=%d",nsel);
check_nomsg(tmp=cpl_table_extract_selected(*r_tbl));
uves_free_table(r_tbl);
check_nomsg(*r_tbl=cpl_table_duplicate(tmp));
cpl_table_new_column(*m_tbl,"CHECK",CPL_TYPE_INT);
cpl_table_new_column(*r_tbl,"CHECK",CPL_TYPE_INT);
cpl_table_fill_column_window_int(*r_tbl,"CHECK",0,nr,0);
cpl_table_fill_column_window_int(*m_tbl,"CHECK",0,nm,0);
for(i=ord_min;i<=ord_max;i++) {
cpl_table_and_selected_int(*m_tbl,"ORDER",CPL_EQUAL_TO,i);
cpl_table_and_selected_int(*r_tbl,"ORDER",CPL_EQUAL_TO,i);
flames_align_table_column(m_tbl,r_tbl,"WAVE");
}
cpl_table_select_all(*m_tbl);
cpl_table_select_all(*r_tbl);
wav_min=(cpl_table_get_column_min(*m_tbl,"WAVE")>
cpl_table_get_column_min(*r_tbl,"WAVE")) ?
cpl_table_get_column_min(*m_tbl,"WAVE") :
cpl_table_get_column_min(*r_tbl,"WAVE");
wav_max=(cpl_table_get_column_max(*m_tbl,"WAVE")<
cpl_table_get_column_max(*r_tbl,"WAVE")) ?
cpl_table_get_column_max(*m_tbl,"WAVE") :
cpl_table_get_column_max(*r_tbl,"WAVE");
uves_msg_warning("wav_min=%g",wav_min);
uves_msg_warning("wav_max=%g",wav_max);
check_nomsg(nsel=cpl_table_and_selected_int(*m_tbl,"ORDER",CPL_NOT_LESS_THAN,ord_min));
check_nomsg(nsel=cpl_table_and_selected_int(*m_tbl,"ORDER",CPL_NOT_GREATER_THAN,ord_max));
check_nomsg(nsel=cpl_table_and_selected_double(*m_tbl,"WAVE",CPL_NOT_LESS_THAN,wav_min));
check_nomsg(nsel=cpl_table_and_selected_double(*m_tbl,"WAVE",CPL_NOT_GREATER_THAN,wav_max));
check_nomsg(nsel=cpl_table_and_selected_int(*m_tbl,"CHECK",CPL_EQUAL_TO,1));
uves_msg_warning("nsel=%d",nsel);
check_nomsg(tmp=cpl_table_extract_selected(*m_tbl));
uves_free_table(m_tbl);
check_nomsg(*m_tbl=cpl_table_duplicate(tmp));
check_nomsg(nsel=cpl_table_and_selected_int(*r_tbl,"ORDER",CPL_NOT_LESS_THAN,ord_min));
check_nomsg(nsel=cpl_table_and_selected_int(*r_tbl,"ORDER",CPL_NOT_GREATER_THAN,ord_max));
check_nomsg(nsel=cpl_table_and_selected_double(*m_tbl,"WAVE",CPL_NOT_LESS_THAN,wav_min));
check_nomsg(nsel=cpl_table_and_selected_double(*m_tbl,"WAVE",CPL_NOT_GREATER_THAN,wav_max));
check_nomsg(nsel=cpl_table_and_selected_int(*r_tbl,"CHECK",CPL_EQUAL_TO,1));
uves_msg_warning("nsel=%d",nsel);
check_nomsg(tmp=cpl_table_extract_selected(*r_tbl));
uves_free_table(r_tbl);
check_nomsg(*r_tbl=cpl_table_duplicate(tmp));
cleanup:
//uves_free_string_const(&rout);
//uves_free_string_const(&mout);
return 0;
}
/**@}*/
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