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/* *
* This file is part of the ESO UVES Pipeline *
* Copyright (C) 2004,2005 European Southern Observatory *
* *
* This library is free software; you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation; either version 2 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU General Public License for more details. *
* *
* You should have received a copy of the GNU General Public License *
* along with this program; if not, write to the Free Software *
* Foundation, 51 Franklin St, Fifth Floor, Boston, MA 02111-1307 USA *
* */
/*
* $Author: amodigli $
* $Date: 2013-07-22 07:32:55 $
* $Revision: 1.38 $
* $Name: not supported by cvs2svn $
*
*/
#ifdef HAVE_CONFIG_H
# include <config.h>
#endif
#include <flames_def_drs_par.h>
#include <flames_reduce_vcorrel.h>
#include <uves_error.h>
/*---------------------------------------------------------------------------*/
/**
* @defgroup flames_def_drs_par DRS constant and default parameter values
*/
/*---------------------------------------------------------------------------*/
int BKGPOL[2] = {4, 5};
// To display (Y) or not (N) images or plots
//#define NICE_CREA "N"
// How large must the SNR on a fibre be in a calibration frame, at a given
// order and x, for that slice to be considered "good"? Give a reasonable
// default value here */
//#define DECENTSNR 10.
double DECENTSNR = 10;
// How close should a detected fibre be to the position predicted by the
// 0 order approximation, for it to be recognised and labeled in
// matchorders() */
double MATCHTHRES = 4;
// Half fibre width on the detector: 520,580 6.5, 860 7.0
// This is updated on the fly during data reduction
//const double HALFIBREWIDTH = 6.5;
double HALFIBREWIDTH = 7.5;
//Maximum number of fibres
int MAXFIBRES = 9;
//SlitFF size & Y shift keywords
//===========================START========================
//Amount of pix from 50% limit of SlitFF flat part discarded
//to be sure to be in the flat part of the SlitFF
//good default value is 3 pix
//#define FLAMES_SAV_BORD_SZ 3
int FLAMES_SAV_BORD_SZ = 3;
//half X window size for median filter. Good default: 3
//#define FLAMES_X_WIND_SIZE 3
int FLAMES_X_WIND_SIZE = 3;
//half Y window size for median filter. Good defauld: 5
//#define FLAMES_Y_WIND_SIZE 5
int FLAMES_Y_WIND_SIZE = 5;
//search window size to filter image. Good default: 100
//#define FLAMES_Y_SEARCH_WIND 100
int FLAMES_Y_SEARCH_WIND = 100;
//number of order cut upper and lower. Robust default: 4
//#define FLAMES_ORD_TRESH 2
int FLAMES_ORD_TRESH = 4;
//k-s clipping iterations over median. Good default: 4
//#define FLAMES_N_CLIP_MED 4
int FLAMES_N_CLIP_MED = 4;
//k-s clipping iterations over average. Good default: 2
//#define FLAMES_N_CLIP_AVG 2
int FLAMES_N_CLIP_AVG = 2;
//signal fraction to set upp and low cut. Good default: 0.5
//Note by AM: 0.5 is small but more trustable to detect the
//real end of a SlitFF. With a small value one could always
//take FLAMES_SAV_BORD_SZ slightly wider (3 pix instead of 2)
//#define FLAMES_INT_TRESH 0.5
double FLAMES_INT_TRESH = 0.5;
//SlitFF size & Y shift keywords
// Number of traces (orders times fibres)
int NBTRACES = 0;
// Minimum fibre fraction coverage for extraction
double MINFIBREFRAC = .3;
// Inline background fitting
const char* BKGFITINLINE="yes";
// Background fitting method:
const char* BKGFITMETHOD="average";
// Background table bad pixel frame scanning switch
// Values:none, fraction, absolute
// Default: none
const char* BKGBADSCAN="none";
// Background table bad pixel frame scanning window size BKGBADWIN 50,50
int BKGBADWIN[2]={50,50};
int BKGBADWINX=50;
int BKGBADWINY=50;
// Background table bad pixel frame scanning threshold fraction
double BKGBADMAXFRAC = 0.02;
// Background table bad pixel frame scanning threshold number
int BKGBADMAXTOT = 200;
// Background window number in each full inter order
int BKG_MAX_IO_WIN = 500;
// Polinomial degree used for BKG fit order DRS_BKG_FIT_POL 2,2
int DRS_BKG_FIT_POL[2] = {4,5};
int DRS_BKG_FIT_POL_X = 4;
int DRS_BKG_FIT_POL_Y = 5;
// x,y maximum size of each background window: BKG_XY_WIN_SZ 6,2
double BKG_XY_WIN_SZ[2] = {6.0, 2.0};
// XHALFWINDOW,YHALFWINDOW window: 2,1 DRS_FILT_HW_XY 2,1
int DRS_FILT_HW[2] = {2,1};
int DRS_FILT_HW_X = 2;
int DRS_FILT_HW_Y = 1;
// maximum filtering iterations in frame preparation 300
int DRS_FILT_IMAX = 300;
// maximum filtering iterations in frame preparation 10
int DRS_FILT_KS = 10;
// Do you want mask saturated pixels in frame preparation ([YES]/NO)?
const char* DRS_FILT_SAT_SW = "YES";
// Do you want a filter/generated badpixel mask: ([NONE]/MEDIAN)?
const char* DRS_FILT_MASK = "NONE";
// Gaussian pseudofibre HWHM for correlation
double GAUSSFIBRESIGMA = 1.5;
// Gaussian pseudofibre total halfwidth for correlation
double GAUSSHALFWIDTH = 6.;
// Half width of the interval to scan for correlation, when determining y shift
double MAXYSHIFT = 3.;
// This is the maximum number of kappa-sigma clipping iterations which we
// are willing to perform in background fitting */
int MAXBACKITERS = 20;
// This is the maximum fraction of windows/pixels which we are willing to
// discard by kappa-sigma clipping in each iteration of the background
// fitting loop */
double MAXDISCARDFRACT = .1;
// This is the maximum number of iterations which we
// are willing to perform in correlation */
int MAXCORRITERS = 30;
// This is the absolute accuracy with which we require in the correlation
// to determine the y shift */
double CORRELTOL = .005;
// This is the x step to use while computing the correlation: it must be
// a positive integer, 1 means "use all pixels", 2 means
// "use every other pixel", 3 means "use one every three" etc. */
int CORRELXSTEP = 1;
// This is the scaling factor with which we define the gaussian width of
// synthetic fibres in correlation */
double GAUSSCORRELSCL = .2;
// This is the scaling factor with which we define window out of which the
// gaussian synthetic fibres are considered negligible in correlation */
double GAUSSCORRELWND = 5.;
// This is the maximum number of cleaning iterations to be tried on a given
// slice in flames_prep_fibre, before
// giving up on its normalisability and falling
// back to the second cleaning strategy */
int MAXCLEANITERS = 10;
// this is the maximum acceptable fraction of the flux in a given slices in
// one single pixel; a higher fraction than this means that there was some
// numerical instability and/or unmasked bad pixel, and that it must be
// discarded */
double MAXSINGLEPXFRC = .3;
// This is the maximum number of iterations which we are willing to
// perform in optimal extraction */
int MAXOPTITERSINT = 25;
// This is the minimum number of iterations which we are willing to
// perform in optimal extraction */
int MINOPTITERSINT = 2;
// When performing sigma-clipping in the optimal extraction, how many
// other adjacent pixels in the x and/or y direction(s) should be
// discarded along with the one exceeding the threshold? A cosmic or
// cosmetic problem is likely to affect a spot larger than 1 pixel */
int XKILLSIZE = 0;
int YKILLSIZE = 1;
// In flames_tracing, a few arrays are statically defined, and need to be
// large enough to contain all the orders which could be possibly found;
// We define it to a hefty one thousend */
int MAXORDER = 1000;
// Width of the y half-window to use when performing order/fibre labelling */
//#define DYRANGE 300
int DYRANGE = 300;
// Step of the scan in y while performing order/fibre labelling */
//#define DYSTEP .1
double DYSTEP = 0.1;
// MASKTHRES defines the minimum value a rebinned mask must have in order
// to consider the corresponding pixel of the rebinned spectrum "good".
// Since a pixel in the rebinned frame may be computed using also bad pixels,
// we want to throw out pixels which contain even a very small fraction of
// "badness"
double MASKTHRES = .99;
// FRACSLICESTHRES defines the minimum fraction of slices that must be good,
// for a fibre to be considered covered enough at the end of fillholes, in
// flames_prep_fibreff, to avoid stupid instabilities in gaussselfcorrel
// if a fibre is only very barely covered by the slit FF frames
//#define FRACSLICESTHRES .3
double FRACSLICESTHRES = 0.3;
// The maximum permitted sizes for the order tables created by the DRS */
int MAXROWS = 300000;
int MAXCOLS = 10;
// ============================================
// Procedures default input parameter settings
// ============================================
// The following settings may be modified
// (at user wish and own risk) to adjust extraction
// -------------------------------------------
// threshold value for maximum pixel saturation: good: 50000-60000
int DRS_PTHRE_MAX = 55000;
// threshold value for maximum pixel saturation: good: -20
int DRS_PTHRE_MIN = -20;
// extraction method: opt/sta/fop/fst/qopt
const char* DRS_EXT_MTD = "opt";
// K-S THRESHOLD good: 10
double DRS_K_S_THRE = 10.;
// K-S THRESHOLD good: 10
int DRS_KSIGMA_THRE = 10;
// Integration window size good: 10 (if fibre deconvolution works fine)
double DRS_EXT_W_SIZ = 10.;
// MIDAS to FITS conersion: Y/N
const char* DRS_MIDAS2FITS = "N";
// BIAS Subtraction method: M/<num>/N
// M: Master bias subtraction
// <num>: constant value subtraction
// N: no subtraction
const char* DRS_BIAS_MTD = "M";
// filter switch
const char* DRS_FILT_SW = "none";
// slitff-fibreff frames preparation: [Y]/N
// Y: yes, slower, for DFO
// N: no, faster, for PSO once the CDB is ready
//#define DRS_SFF_FIBFF "Y"
// crea Bad Pix table
//#define DRS_CREA_BP_TAB "N"
// Physical model auto recover switch
// Y: yes, the physical model auto recovers
// N: no, the physical model does not auto recover
//#define DRS_PHYSMOD_REC "Y"
// What merging method are we using:
// FLAMES one or the standard ECHELLE? ECHELLE is more robust
//#define DRS_MER_MTD "ECHELLE"
// Produce or not raw science data
//#define DRS_SCI_RAW "Y"
// DRS MIDAS VERBOSITY
const char* DRS_VERBOSITY = "LOW";
//const char* DRS_VERBOSITY = "HIGH";
// DRS MIDAS MESSAGE LEVEL
// if "{DRS_VERBOSITY}" .eq. "LOW" then
// #define DRS_MES_LEV/i/1/1 4
// else if "{DRS_VERBOSITY}" .eq. "NORM" then
// #define DRS_MES_LEV/i/1/1 3
// else if "{DRS_VERBOSITY}" .eq. "HIGH" then
// #define DRS_MES_LEV/i/1/1 3
// else
// #define DRS_MES_LEV/i/1/1 3
// endif
//#define DRS_MES_LEV 4
// DRS CUBIFY SWITCH
const char* DRS_CUBIFY = "N";
// DRS QC key holder
//#define DRS_BKG_PIX 0
int DRS_BKG_PIX = 0;
// DRS strenghtened correlation shape definition
// and pre search of maximum switch:
// Y do pre search of correlation's maximum.
// N don't do it (do only search of max with modified Brent method
// on points -3,0,+3)
const char* DRS_COR_MAX_FND = "Y";
// DRS Correlation function's range: [-DRS_COR_DEF_RNG,+DRS_COR_DEF_RNG] pix
float DRS_COR_DEF_RNG = 6.;
// DRS Correlation function's No of definition points
// Effective No of points is 2*DRS_COR_DEF_PNT+1
// For PSO we use a default of 50
int DRS_COR_DEF_PNT = 25;
// DRS Correlation function's offset to range center
float DRS_COR_DEF_OFF = 0.;
// Effective No of points is 2*DRS_COR_DEF_PNT+1
//#define DRS_WAVE_QC_LOG 0
// DRS QC key holder
//#define DRS_CHI2_RED 0.
double DRS_CHI2_RED = 0;
// DRS QC key holder
//#define DRS_Y_SHIFT 0.
// DRS N LIT FIBRES
//#define DRS_NLIT_FIBRES 0
int DRS_NLIT_FIBRES = 0;
// DRS Wavecal linear fit mode:
//#define DRS_WCAL_MODE "AUTO"
// DRS Wavecal Resolution Plots generation:
//#define DRS_WCAL_RPLT "Y"
// DRS Wavecal FITS output tables:
//#define DRS_WCAL_FITS "N"
// DRS Wavecal FITS output tables:
const char* DRS_BASE_NAME = "fxb";
// DRS Wavecal FITS output tables:
//#define DRS_SCI_CUBE "N"
// DRS Wavecal polynomial solution degree: originally 5, 4 is more robust
//#define DRS_WCAL_DC 4
// DRS Wavecal polynomial solution tolerance: 0.6
//#define DRS_WCAL_TOL 0.6
// DRS Wavecal parameters:
//#define DRS_WCAL_PAR {DRS_WCAL_MODE}, {DRS_WCAL_RPLT}, {DRS_WCAL_FITS}, {DRS_WCAL_DC}, {DRS_WCAL_TOL}
// DRS Multiple parameter:
//#define DRS_SCI_PAR1 {DRS_EXT_MTD}, {DRS_COR_MAX_FND}, {DRS_COR_DEF_RNG}, {DRS_COR_DEF_PNT}, {DRS_COR_DEF_OFF}
// DRS Wavecal polynomial solution tolerance:
//#define DRS_SCI_PAR2 {DRS_BIAS_MTD},{DRS_FILT_SW},{DRS_PTHRE_MAX}
// First component of P8 for the 3 settings:
// Sometime in 520 setting one may have less problems
// using a higher value of DRS_P8_OFPOS_S1, like 0.2
// Reasonable values are:
// 520: .05
// 580: .10
// 860: .10
// DRS Parameter P8 for hough/echelle: Note flames_ofpos (OFPOS/FLAMES)
// Uses values:
// DRS_P8_OFPOS="{DRS_P8_OFPOS_S1(i)},-.1,.1,.005,1." i=1,2,3
double DRS_P8_OFPOS_S1_1 = .05;
double DRS_P8_OFPOS_S1_2 = .10;
double DRS_P8_OFPOS_S1_3 = .10;
// Chopped part in CCD in doing hough/echelle
// same meaning of parameter SCAN of hough/echelle
// DRS_SCAN_MIN: lower part of CCD
// DRS_SCAN_MAX: upper part of CCD
// Those aliases are hardcoded in OFPOS/FLAMES
//#define DRS_SCAN_MIN 55,73,73 // 520: 55
// 580: 73
// 860: 73
//#define DRS_SCAN_MAX 1993,1975,1975 // 520: 1993 (1993=2048-55)
// 580: 1975 (1975=2048-73)
// 860: 1975
int DRS_SCAN_MIN_1 = 55;
int DRS_SCAN_MIN_2 = 73;
int DRS_SCAN_MIN_3 = 73;
int DRS_SCAN_MAX_1 = 1993;
int DRS_SCAN_MAX_2 = 1975;
int DRS_SCAN_MAX_3 = 1975;
// To easily temporally test data reduction
//#define DRS_DIR_SPFMT /new_format/with_extensions
//#define DRS_MER_DELTA "5,5"
const char* DRS_DEL_SW="A";
//#define DRS_WCHAR_DEG 4
//#define DRS_WCHAR_WID 4.
// Simultaneous fibre data reduction
//#define DRS_SCI_SIM Y
//#define DRS_CVEL_SWITCH "Y"
// Simultaneous fibre data reduction
//#define FLAMES_DRS_SFF_HW_MIN 10
int FLAMES_DRS_SFF_HW_MIN = 10;
// SWITCH FOR generating not blaze corrected extracted frames.
//#define DRS_BLAZE_SW "Y"
bool DRS_BLAZE_SW = true;
cpl_error_code
flames_def_drs_par(cpl_parameterlist* list, const char* recipe_id)
{
//cpl_parameter* p=NULL;
//int BKGPOL[2] = {4, 5};
// To display (Y) or not (N) images or plots
//#define NICE_CREA "N"
uves_parameters_new_double(list,recipe_id,"BKGPOLX",4,
"Polynomial degree used for inter-order background computation");
uves_parameters_new_double(list,recipe_id,"BKGPOLY",5,
"Polynomial degree used for inter-order background computation");
uves_parameters_new_double(list,recipe_id,"DECENTSNR",10,
"How large must the SNR on a fibre be in a calibration frame, at a given "
"order and x, for that slice to be considered 'good'? Give a reasonable "
"default value here.");
uves_parameters_new_double(list,recipe_id,"MATCHTHRESH",4,
"How close should a detected fibre be to the position predicted by the"
"0 order approximation, for it to be recognised and labeled in"
"matchorders()");
uves_parameters_new_double(list,recipe_id,"HALFIBREWIDTH",7.5,
"Half fibre width on the detector: 520,580 6.5, 860 7.0"
"This is updated on the fly during data reduction");
uves_parameters_new_int(list,recipe_id,"MAXFIBRES",9,
"Maximum number of fibres");
uves_parameters_new_int(list,recipe_id,"FLAMES_SAV_BORD_SZ",3,
"Amount of pix from 50% limit of SlitFF flat part discarded"
"to be sure to be in the flat part of the SlitFF");
uves_parameters_new_int(list,recipe_id,"FLAMES_X_WIND_SIZE",3,
"half X window size for median filter.");
uves_parameters_new_int(list,recipe_id,"FLAMES_Y_WIND_SIZE",5,
"half X window size for median filter.");
uves_parameters_new_int(list,recipe_id,"FLAMES_Y_SEARCH_WIND",100,
"search window size to filter image.");
uves_parameters_new_int(list,recipe_id,"FLAMES_ORD_TRESH",2,
"number of order cut upper and lower.");
uves_parameters_new_int(list,recipe_id,"FLAMES_N_CLIP_MED",4,
"k-s clipping iterations over median");
uves_parameters_new_int(list,recipe_id,"FLAMES_N_CLIP_AVG",2,
"k-s clipping iterations over average");
uves_parameters_new_double(list,recipe_id,"FLAMES_INT_TRESH",0.5,
"signal fraction to set upp and low cut. Good default: 0.5"
"Note by AM: 0.5 is small but more trustable to detect the"
"real end of a SlitFF. With a small value one could always"
"take FLAMES_SAV_BORD_SZ slightly wider (3 pix instead of 2)");
//SlitFF size & Y shift keywords
uves_parameters_new_int(list,recipe_id,"NBTRACES",0,
"Number of traces (orders times fibres)");
uves_parameters_new_double(list,recipe_id,"MINFIBREFRAC",0.3,
"Minimum fibre fraction coverage for extraction");
uves_parameters_new_string(list,recipe_id,"BKGFITINLINE","yes",
"Inline background fitting");
uves_parameters_new_string(list,recipe_id,"BKGFITMETHOD","average",
"Background fitting method:");
// Background table bad pixel frame scanning switch
// Values:none, fraction, absolute
// Default: none
//const char* BKGBADSCAN="none";
// Background table bad pixel frame scanning window size BKGBADWIN 50,50
//int BKGBADWIN[2]={50,50};
//int BKGBADWINX=50;
//int BKGBADWINY=50;
uves_parameters_new_int(list,recipe_id,"BKGBADWINX",50,
"Background table bad pixel frame scanning window X size");
uves_parameters_new_int(list,recipe_id,"BKGBADWINY",50,
"Background table bad pixel frame scanning window Y size");
uves_parameters_new_double(list,recipe_id,"BKGBADMAXFRAC",0.02,
"Background table bad pixel frame scanning threshold fraction");
uves_parameters_new_int(list,recipe_id,"BKGBADMAXTOT",200,
"Background table bad pixel frame scanning threshold number");
uves_parameters_new_int(list,recipe_id,"BKG_MAX_IO_WIN",500,
"Background window number in each full inter order");
// Polinomial degree used for BKG fit order DRS_BKG_FIT_POL 2,2
//int DRS_BKG_FIT_POL[2] = {4,5};
//int DRS_BKG_FIT_POL_X = 4;
//int DRS_BKG_FIT_POL_Y = 5;
uves_parameters_new_int(list,recipe_id,"DRS_BKG_FIT_POL_X",4,
"Polinomial X degree used for BKG fit order");
uves_parameters_new_int(list,recipe_id,"DRS_BKG_FIT_POL_Y",5,
"Polinomial Y degree used for BKG fit order");
// x,y maximum size of each background window: BKG_XY_WIN_SZ 6,2
//double BKG_XY_WIN_SZ[2] = {6.0, 2.0};
// XHALFWINDOW,YHALFWINDOW window: 2,1 DRS_FILT_HW_XY 2,1
//int DRS_FILT_HW[2] = {2,1};
//int DRS_FILT_HW_X = 2;
//int DRS_FILT_HW_Y = 1;
uves_parameters_new_int(list,recipe_id,"DRS_FILT_HW_X",2,
"X Half width window for background computation");
uves_parameters_new_int(list,recipe_id,"DRS_FILT_HW_X",1,
"Y Half width window for background computation");
uves_parameters_new_int(list,recipe_id,"DRS_FILT_IMAX",300,
"maximum filtering iterations in frame preparation");
uves_parameters_new_int(list,recipe_id,"DRS_FILT_KS",10,
"maximum filtering iterations in frame preparation");
//AMO: Here better enum
uves_parameters_new_string(list,recipe_id,"DRS_FILT_SAT_SW","YES",
"Do you want mask saturated pixels in frame preparation ([YES]/NO)?");
//AMO: Here better enum
uves_parameters_new_string(list,recipe_id,"DRS_FILT_MASK","NONE",
"Do you want a filter/generated badpixel mask: ([NONE]/MEDIAN)?");
uves_parameters_new_double(list,recipe_id,"GAUSSFIBRESIGMA",1.5,
"Gaussian pseudofibre HWHM for correlation");
uves_parameters_new_double(list,recipe_id,"GAUSSHALFWIDTH",6,
"Gaussian pseudofibre total halfwidth for correlation");
uves_parameters_new_double(list,recipe_id,"MAXYSHIFT",3,
"Half width of the interval to scan for correlation, when determining y shift");
uves_parameters_new_int(list,recipe_id,"MAXBACKITERS",20,
"This is the maximum number of kappa-sigma clipping iterations which we"
"are willing to perform in background fitting");
uves_parameters_new_double(list,recipe_id,"MAXDISCARDFRACT",.1,
"This is the maximum fraction of windows/pixels which we are willing to "
"discard by kappa-sigma clipping in each iteration of the background "
"fitting loop");
uves_parameters_new_int(list,recipe_id,"MAXCORRITERS",30,
"This is the maximum number of iterations which we "
"are willing to perform in correlation ");
uves_parameters_new_double(list,recipe_id,"CORRELTO",.005,
"This is the absolute accuracy with which we require in the correlation "
"to determine the y shift ");
uves_parameters_new_int(list,recipe_id,"CORRELXSTEP",1,
"This is the x step to use while computing the correlation: it must be "
"a positive integer, 1 means 'use all pixels', 2 means "
" 'use every other pixel', 3 means 'use one every three' etc.");
uves_parameters_new_double(list,recipe_id,"GAUSSCORRELSCL",.2,
"This is the scaling factor with which we define the gaussian width of "
"synthetic fibres in correlation");
uves_parameters_new_double(list,recipe_id,"GAUSSCORRELWND",5.,
"This is the scaling factor with which we define window out of which the "
"Gaussian synthetic fibres are considered negligible in correlation");
uves_parameters_new_int(list,recipe_id,"MAXCLEANITERS",10,
"This is the maximum number of cleaning iterations to be tried on a given "
"slice in flames_prep_fibre, before "
"giving up on its normalisability and falling "
"back to the second cleaning strategy");
uves_parameters_new_double(list,recipe_id,"MAXSINGLEPXFRC",.3,
"this is the maximum acceptable fraction of the flux in a given slices in "
"one single pixel; a higher fraction than this means that there was some "
"numerical instability and/or unmasked bad pixel, and that it must be "
"discarded ");
uves_parameters_new_int(list,recipe_id,"MAXOPTITERSINT",25,
"This is the maximum number of iterations which we are willing to "
"perform in optimal extraction ");
uves_parameters_new_int(list,recipe_id,"MINOPTITERSINT",2,
"This is the minimum number of iterations which we are willing to "
"perform in optimal extraction ");
uves_parameters_new_int(list,recipe_id,"XKILLSIZE",0,
"When performing sigma-clipping in the optimal extraction, how many "
"other adjacent pixels in the x and/or y direction(s) should be "
"discarded along with the one exceeding the threshold? A cosmic or "
"cosmetic problem is likely to affect a spot larger than 1 pixel ");
uves_parameters_new_int(list,recipe_id,"YKILLSIZE",1,
"When performing sigma-clipping in the optimal extraction, how many "
"other adjacent pixels in the x and/or y direction(s) should be "
"discarded along with the one exceeding the threshold? A cosmic or "
"cosmetic problem is likely to affect a spot larger than 1 pixel ");
uves_parameters_new_int(list,recipe_id,"MAXORDER",1000,
"In flames_tracing, a few arrays are statically defined, and need to be "
"large enough to contain all the orders which could be possibly found; "
"We define it to a hefty one thousend ");
uves_parameters_new_int(list,recipe_id,"DYRANGE",300,
"Width of the y half-window to use when performing order/fibre labelling ");
uves_parameters_new_double(list,recipe_id,"DYSTEP",0.1,
"Step of the scan in y while performing order/fibre labelling ");
uves_parameters_new_double(list,recipe_id,"MASKTHRES",0.99,
"MASKTHRES defines the minimum value a rebinned mask must have in order "
"to consider the corresponding pixel of the rebinned spectrum 'good'. "
"Since a pixel in the rebinned frame may be computed using also bad pixels, "
"we want to throw out pixels which contain even a very small fraction of "
"'badness'");
uves_parameters_new_double(list,recipe_id,"FRACSLICESTHRES",0.3,
"FRACSLICESTHRES defines the minimum fraction of slices that must be good, "
"for a fibre to be considered covered enough at the end of fillholes, in "
"flames_prep_fibreff, to avoid stupid instabilities in gaussselfcorrel "
"if a fibre is only very barely covered by the slit FF frames ");
uves_parameters_new_int(list,recipe_id,"MAXROWS",300000,
"The maximum permitted sizes for the order tables created by the DRS");
uves_parameters_new_int(list,recipe_id,"MAXROWS",10,
"The maximum permitted sizes for the order tables created by the DRS");
// ============================================
// Procedures default input parameter settings
// ============================================
// The following settings may be modified
// (at user wish and own risk) to adjust extraction
// -------------------------------------------
uves_parameters_new_int(list,recipe_id,"DRS_PTHRE_MAX",55000,
"threshold value for maximum pixel saturation: good: 50000-60000");
uves_parameters_new_int(list,recipe_id,"DRS_PTHRE_MIN",-20,
"threshold value for maximum pixel saturation: good: -20");
// extraction method: opt/sta/fop/fst/qopt
//const char* DRS_EXT_MTD = "opt";
// K-S THRESHOLD good: 10
//double DRS_K_S_THRE = 10.;
uves_parameters_new_double(list,recipe_id,"DRS_K_S_THRE",10,
"K-S THRESHOLD good: 10");
uves_parameters_new_double(list,recipe_id,"DRS_EXT_W_SIZ",10,
"Integration window size good: 10 (if fibre deconvolution works fine)");
// MIDAS to FITS conersion: Y/N
//const char* DRS_MIDAS2FITS = "N";
// BIAS Subtraction method: M/<num>/N
// M: Master bias subtraction
// <num>: constant value subtraction
// N: no subtraction
//const char* DRS_BIAS_MTD = "M";
// filter switch
//const char* DRS_FILT_SW = "none";
uves_parameters_new_string(list,recipe_id,"DRS_FILT_SW","none",
"filter switch");
// slitff-fibreff frames preparation: [Y]/N
// Y: yes, slower, for DFO
// N: no, faster, for PSO once the CDB is ready
//#define DRS_SFF_FIBFF "Y"
// crea Bad Pix table
//#define DRS_CREA_BP_TAB "N"
// Physical model auto recover switch
// Y: yes, the physical model auto recovers
// N: no, the physical model does not auto recover
//#define DRS_PHYSMOD_REC "Y"
// What merging method are we using:
// FLAMES one or the standard ECHELLE? ECHELLE is more robust
//#define DRS_MER_MTD "ECHELLE"
// Produce or not raw science data
//#define DRS_SCI_RAW "Y"
// DRS MIDAS VERBOSITY
//const char* DRS_VERBOSITY = "LOW";
//const char* DRS_VERBOSITY = "HIGH";
// DRS MIDAS MESSAGE LEVEL
// if "{DRS_VERBOSITY}" .eq. "LOW" then
// #define DRS_MES_LEV/i/1/1 4
// else if "{DRS_VERBOSITY}" .eq. "NORM" then
// #define DRS_MES_LEV/i/1/1 3
// else if "{DRS_VERBOSITY}" .eq. "HIGH" then
// #define DRS_MES_LEV/i/1/1 3
// else
// #define DRS_MES_LEV/i/1/1 3
// endif
//#define DRS_MES_LEV 4
// DRS CUBIFY SWITCH
//const char* DRS_CUBIFY = "N";
//Here better an enum
uves_parameters_new_string(list,recipe_id,"DRS_CUBIFY","N",
"Switch to have products in imagelists");
// DRS QC key holder
//#define DRS_BKG_PIX 0
//int DRS_BKG_PIX = 0;
//AMO: solve this
uves_parameters_new_int(list,recipe_id,"DRS_BKG_PIX",0,
"DRS QC key holder??");
// DRS strenghtened correlation shape definition
// and pre search of maximum switch:
// Y do pre search of correlation's maximum.
// N don't do it (do only search of max with modified Brent method
// on points -3,0,+3)
//const char* DRS_COR_MAX_FND = "Y";
uves_parameters_new_string(list,recipe_id,"DRS_COR_MAX_FND","Y",
"DRS strenghtened correlation shape definition "
"and pre search of maximum switch: "
" Y do pre search of correlation's maximum."
" N don't do it (do only search of max with modified Brent method"
" on points (-3,0,+3)");
uves_parameters_new_float(list,recipe_id,"DRS_COR_DEF_RNG",6,
"DRS Correlation function's range: [-DRS_COR_DEF_RNG,+DRS_COR_DEF_RNG] pix");
uves_parameters_new_int(list,recipe_id,"DRS_COR_DEF_PNT",25,
"DRS Correlation function's No of definition points "
"Effective No of points is 2*DRS_COR_DEF_PNT+1 "
"For PSO we use a default of 50 ");
uves_parameters_new_float(list,recipe_id,"DRS_COR_DEF_OFF",0,
"DRS Correlation function's offset to range center");
// DRS QC key holder
//#define DRS_CHI2_RED 0.
//double DRS_CHI2_RED = 0;
// DRS QC key holder
//#define DRS_Y_SHIFT 0.
//#define DRS_NLIT_FIBRES 0
uves_parameters_new_int(list,recipe_id,"DRS_NLIT_FIBRES",0,
"DRS N LIT FIBRES");
// DRS Wavecal linear fit mode:
//#define DRS_WCAL_MODE "AUTO"
// DRS Wavecal Resolution Plots generation:
//#define DRS_WCAL_RPLT "Y"
// DRS Wavecal FITS output tables:
//#define DRS_WCAL_FITS "N"
uves_parameters_new_string(list,recipe_id,"DRS_BASE_NAME","fxb",
"File prefix fopr extracted frames");
// DRS Wavecal FITS output tables:
//#define DRS_SCI_CUBE "N"
// DRS Wavecal polynomial solution degree: originally 5, 4 is more robust
//#define DRS_WCAL_DC 4
// DRS Wavecal polynomial solution tolerance: 0.6
//#define DRS_WCAL_TOL 0.6
// DRS Wavecal parameters:
//#define DRS_WCAL_PAR {DRS_WCAL_MODE}, {DRS_WCAL_RPLT}, {DRS_WCAL_FITS}, {DRS_WCAL_DC}, {DRS_WCAL_TOL}
// DRS Multiple parameter:
//#define DRS_SCI_PAR1 {DRS_EXT_MTD}, {DRS_COR_MAX_FND}, {DRS_COR_DEF_RNG}, {DRS_COR_DEF_PNT}, {DRS_COR_DEF_OFF}
// DRS Wavecal polynomial solution tolerance:
//#define DRS_SCI_PAR2 {DRS_BIAS_MTD},{DRS_FILT_SW},{DRS_PTHRE_MAX}
// First component of P8 for the 3 settings:
// Sometime in 520 setting one may have less problems
// using a higher value of DRS_P8_OFPOS_S1, like 0.2
// Reasonable values are:
// 520: .05
// 580: .10
// 860: .10
// DRS Parameter P8 for hough/echelle: Note flames_ofpos (OFPOS/FLAMES)
// Uses values:
// DRS_P8_OFPOS="{DRS_P8_OFPOS_S1(i)},-.1,.1,.005,1." i=1,2,3
uves_parameters_new_double(list,recipe_id,"DRS_P8_OFPOS_S1_1",0.05,
"DRS Parameter P8 for hough/echelle, 1st value");
uves_parameters_new_double(list,recipe_id,"DRS_P8_OFPOS_S1_2",0.1,
"DRS Parameter P8 for hough/echelle, 2nd value");
uves_parameters_new_double(list,recipe_id,"DRS_P8_OFPOS_S1_3",0.1,
"DRS Parameter P8 for hough/echelle, 3rd value");
// Chopped part in CCD in doing hough/echelle
// same meaning of parameter SCAN of hough/echelle
// DRS_SCAN_MIN: lower part of CCD
// DRS_SCAN_MAX: upper part of CCD
// Those aliases are hardcoded in OFPOS/FLAMES
//#define DRS_SCAN_MIN 55,73,73 // 520: 55
// 580: 73
// 860: 73
//#define DRS_SCAN_MAX 1993,1975,1975 // 520: 1993 (1993=2048-55)
// 580: 1975 (1975=2048-73)
// 860: 1975
uves_parameters_new_int(list,recipe_id,"DRS_SCAN_MIN_1",55,
"Chopped part in CCD in doing hough/echellee"
"same meaning of parameter SCAN of hough/echelle"
"DRS_SCAN_MIN: lower part of CCD");
uves_parameters_new_int(list,recipe_id,"DRS_SCAN_MIN_2",73,
"Chopped part in CCD in doing hough/echellee"
"same meaning of parameter SCAN of hough/echelle"
"DRS_SCAN_MIN: lower part of CCD");
uves_parameters_new_int(list,recipe_id,"DRS_SCAN_MIN_3",73,
"Chopped part in CCD in doing hough/echellee"
"same meaning of parameter SCAN of hough/echelle"
"DRS_SCAN_MIN: lower part of CCD");
uves_parameters_new_int(list,recipe_id,"DRS_SCAN_MAX_1",1993,
"Chopped part in CCD in doing hough/echellee"
"same meaning of parameter SCAN of hough/echelle"
"DRS_SCAN_MAX: upper part of CCD");
uves_parameters_new_int(list,recipe_id,"DRS_SCAN_MAX_2",1975,
"Chopped part in CCD in doing hough/echellee"
"same meaning of parameter SCAN of hough/echelle"
"DRS_SCAN_MAX: upper part of CCD");
uves_parameters_new_int(list,recipe_id,"DRS_SCAN_MAX_3",1975,
"Chopped part in CCD in doing hough/echellee"
"same meaning of parameter SCAN of hough/echelle"
"DRS_SCAN_MAX: upper part of CCD");
// To easily temporally test data reduction
//#define DRS_DIR_SPFMT /new_format/with_extensions
//#define DRS_MER_DELTA "5,5"
//const char* DRS_DEL_SW="A";
//#define DRS_WCHAR_DEG 4
//#define DRS_WCHAR_WID 4.
// Simultaneous fibre data reduction
//#define DRS_SCI_SIM Y
//#define DRS_CVEL_SWITCH "Y"
uves_parameters_new_int(list,recipe_id,"FLAMES_DRS_SFF_HW_MIN",10,
"Minimum half width of slit flat field");
// Simultaneous corvel simcal data reduction
//double DRS_CVEL_MIN = -6.;
//double DRS_CVEL_MAX = +6.;
//double DRS_CVEL_STEP = 0.5;
uves_parameters_new_boolean(list,recipe_id,"DRS_BLAZE_SW",true,
"SWITCH FOR generating not blaze corrected extracted frames.");
return cpl_error_get_code();
}
void uves_parameters_new_int( cpl_parameterlist* list,
const char* recipe_id, const char* name,int value, const char* comment)
{
char paramname[256];
char recipename[256];
cpl_parameter* p =NULL;
sprintf(recipename,"xsh.%s",recipe_id);
sprintf(paramname,"%s.%s",recipename,name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameter_new_value(paramname,CPL_TYPE_INT,comment,
recipename,value));
check_nomsg(cpl_parameter_set_alias(p,CPL_PARAMETER_MODE_CLI,name));
check_nomsg(cpl_parameterlist_append(list,p));
cleanup:
return;
}
void uves_parameters_new_boolean( cpl_parameterlist* list,
const char* recipe_id, const char* name,int value, const char* comment)
{
char paramname[256];
char recipename[256];
cpl_parameter* p =NULL;
sprintf(recipename,"xsh.%s",recipe_id);
sprintf(paramname,"%s.%s",recipename,name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameter_new_value(paramname,CPL_TYPE_BOOL,comment,
recipename,value));
check_nomsg(cpl_parameter_set_alias(p,CPL_PARAMETER_MODE_CLI,name));
check_nomsg(cpl_parameterlist_append(list,p));
cleanup:
return;
}
void uves_parameters_new_string( cpl_parameterlist* list,
const char* recipe_id,
const char* name,
const char *value,
const char* comment)
{
char * paramname = NULL ;
char * recipename = NULL ;
cpl_parameter* p =NULL;
recipename = cpl_sprintf( "uves.%s", recipe_id);
paramname = cpl_sprintf( "%s.%s",recipename, name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameter_new_value(paramname,CPL_TYPE_STRING, comment,
recipename, value));
check_nomsg(cpl_parameter_set_alias(p,CPL_PARAMETER_MODE_CLI,name));
check_nomsg(cpl_parameterlist_append(list,p));
cleanup:
cpl_free(recipename);
cpl_free(paramname);
return;
}
void uves_parameters_new_double( cpl_parameterlist* list,
const char* recipe_id,const char* name,double value, const char* comment)
{
char * paramname = NULL ;
char * recipename = NULL ;
cpl_parameter* p =NULL;
recipename = cpl_sprintf( "uves.%s", recipe_id);
paramname = cpl_sprintf( "%s.%s",recipename, name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameter_new_value(paramname,CPL_TYPE_DOUBLE,comment,
recipename,value));
check_nomsg(cpl_parameter_set_alias(p,CPL_PARAMETER_MODE_CLI,name));
check_nomsg(cpl_parameterlist_append(list,p));
cleanup:
cpl_free(recipename);
cpl_free(paramname);
return;
}
void uves_parameters_new_float( cpl_parameterlist* list,
const char* recipe_id,const char* name,float value, const char* comment)
{
char * paramname = NULL ;
char * recipename = NULL ;
cpl_parameter* p =NULL;
recipename = cpl_sprintf( "uves.%s", recipe_id);
paramname = cpl_sprintf( "%s.%s",recipename, name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameter_new_value(paramname,CPL_TYPE_FLOAT,comment,
recipename,value));
check_nomsg(cpl_parameter_set_alias(p,CPL_PARAMETER_MODE_CLI,name));
check_nomsg(cpl_parameterlist_append(list,p));
cleanup:
cpl_free(recipename);
cpl_free(paramname);
return;
}
void uves_parameters_new_range_int( cpl_parameterlist* list,
const char* recipe_id,
const char* name,
int def, int min, int max,
const char* comment)
{
char * paramname = NULL ;
char * recipename = NULL ;
cpl_parameter* p =NULL;
recipename = cpl_sprintf( "uves.%s", recipe_id);
paramname = cpl_sprintf( "%s.%s",recipename, name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameter_new_range( paramname,CPL_TYPE_INT, comment,
recipename, def, min, max ));
check_nomsg(cpl_parameter_set_alias(p,CPL_PARAMETER_MODE_CLI,name));
check_nomsg(cpl_parameterlist_append(list,p));
cleanup:
cpl_free(recipename);
cpl_free(paramname);
return;
}
void uves_parameters_new_range_float( cpl_parameterlist* list,
const char* recipe_id,
const char* name,
float def, float min, float max,
const char* comment)
{
char * paramname = NULL ;
char * recipename = NULL ;
cpl_parameter* p =NULL;
recipename = cpl_sprintf( "uves.%s", recipe_id);
paramname = cpl_sprintf( "%s.%s",recipename, name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameter_new_range( paramname,CPL_TYPE_FLOAT, comment,
recipename, def, min, max ));
check_nomsg(cpl_parameter_set_alias(p,CPL_PARAMETER_MODE_CLI,name));
check_nomsg(cpl_parameterlist_append(list,p));
cleanup:
cpl_free(recipename);
cpl_free(paramname);
return;
}
void uves_parameters_new_range_double( cpl_parameterlist* list,
const char* recipe_id,
const char* name,
double def, double min, double max,
const char* comment)
{
char * paramname = NULL ;
char * recipename = NULL ;
cpl_parameter* p =NULL;
recipename = cpl_sprintf( "uves.%s", recipe_id);
paramname = cpl_sprintf( "%s.%s",recipename, name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameter_new_range( paramname,CPL_TYPE_DOUBLE, comment,
recipename, def, min, max ));
check_nomsg(cpl_parameter_set_alias(p,CPL_PARAMETER_MODE_CLI,name));
check_nomsg(cpl_parameterlist_append(list,p));
cleanup:
cpl_free(recipename);
cpl_free(paramname);
return;
}
char * uves_parameters_get_string( const cpl_parameterlist* list,
const char* recipe_id, const char* name)
{
char paramname[256];
cpl_parameter * p =NULL;
char * result = NULL ;
sprintf(paramname,"xsh.%s.%s",recipe_id, name);
p = cpl_parameterlist_find( (cpl_parameterlist *)list, paramname);
if ( p == NULL ) goto cleanup ;
result = (char *)cpl_parameter_get_string(p) ;
cleanup:
return result;
}
int uves_parameters_get_boolean( const cpl_parameterlist * list,
const char* recipe_id, const char* name)
{
char * paramname = NULL ;
char * recipename = NULL ;
cpl_parameter* p =NULL;
int result = 0;
recipename = cpl_sprintf( "uves.%s", recipe_id);
paramname = cpl_sprintf( "%s.%s",recipename, name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameterlist_find( (cpl_parameterlist *)list,paramname));
check_nomsg(result = cpl_parameter_get_bool( p));
cleanup:
cpl_free(recipename);
cpl_free(paramname);
return result;
}
int uves_parameters_get_int( cpl_parameterlist* list,
const char* recipe_id, const char* name)
{
char * paramname =NULL;
char * recipename =NULL;
cpl_parameter* p =NULL;
int result = 0;
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
assure(recipe_id != NULL,CPL_ERROR_NULL_INPUT,"input recipe id is NULL");
assure(name != NULL,CPL_ERROR_NULL_INPUT,"input param name is NULL");
sprintf(recipename,"xsh.%s",recipe_id);
sprintf(paramname,"%s.%s",recipename,name);
check_nomsg(p = cpl_parameterlist_find( (cpl_parameterlist *)list,paramname));
check_nomsg(result = cpl_parameter_get_int(p));
cleanup:
return result;
}
double uves_parameters_get_double( cpl_parameterlist* list,
const char* recipe_id, const char* name)
{
char * paramname = NULL ;
char * recipename = NULL ;
cpl_parameter* p =NULL;
double result = 0.0;
recipename = cpl_sprintf( "uves.%s", recipe_id);
paramname = cpl_sprintf( "%s.%s",recipename, name);
assure(list != NULL,CPL_ERROR_NULL_INPUT,"parameters list is NULL");
check_nomsg(p = cpl_parameterlist_find(list,paramname));
check_nomsg(result = cpl_parameter_get_double(p));
cleanup:
cpl_free(recipename);
cpl_free(paramname);
return result;
}
cpl_error_code
flames_update_drs_par(cpl_propertylist* plist)
{
//const int BKGPOL[2] = {4, 5};
DECENTSNR=cpl_propertylist_get_double(plist,"DECENTSNR");
MATCHTHRES=cpl_propertylist_get_double(plist,"MATCHTHRES");
HALFIBREWIDTH=cpl_propertylist_get_double(plist,"HALFIBREWIDTH");
MAXFIBRES=cpl_propertylist_get_int(plist,"MAXFIBRES");
FLAMES_SAV_BORD_SZ=cpl_propertylist_get_int(plist,"FLAMES_SAV_BORD_SZ");
FLAMES_X_WIND_SIZE = cpl_propertylist_get_int(plist,"FLAMES_X_WIND_SIZE");
FLAMES_Y_WIND_SIZE = cpl_propertylist_get_int(plist,"FLAMES_Y_WIND_SIZE");
FLAMES_Y_SEARCH_WIND=cpl_propertylist_get_int(plist,"FLAMES_Y_SEARCH_WIND");
FLAMES_ORD_TRESH=cpl_propertylist_get_int(plist,"FLAMES_ORD_TRESH");
FLAMES_N_CLIP_MED=cpl_propertylist_get_int(plist,"FLAMES_N_CLIP_MED");
FLAMES_N_CLIP_AVG = cpl_propertylist_get_int(plist,"FLAMES_N_CLIP_AVG");
FLAMES_INT_TRESH = cpl_propertylist_get_double(plist,"FLAMES_INT_TRESH");
NBTRACES=cpl_propertylist_get_int(plist,"NBTRACES");
MINFIBREFRAC =cpl_propertylist_get_double(plist,"MINFIBREFRAC");
BKGFITINLINE=cpl_propertylist_get_string(plist,"BKGFITINLINE");
BKGFITMETHOD=cpl_propertylist_get_string(plist,"BKGFITMETHOD");
BKGBADSCAN=cpl_propertylist_get_string(plist,"BKGBADSCAN");
//const int BKGBADWIN[2]={50,50};
BKGBADWINX=cpl_propertylist_get_int(plist,"BKGBADWINX");
BKGBADWINY=cpl_propertylist_get_int(plist,"BKGBADWINY");
BKGBADMAXFRAC = cpl_propertylist_get_double(plist,"BKGBADMAXFRAC");
BKGBADMAXTOT = cpl_propertylist_get_int(plist,"BKGBADMAXTOT");
BKG_MAX_IO_WIN =cpl_propertylist_get_int(plist,"BKG_MAX_IO_WIN");
//const int DRS_BKG_FIT_POL[2] = {4,5};
DRS_BKG_FIT_POL_X = cpl_propertylist_get_int(plist,"DRS_BKG_FIT_POL_X");
DRS_BKG_FIT_POL_Y = cpl_propertylist_get_int(plist,"DRS_BKG_FIT_POL_Y");
//const int DRS_FILT_HW[2] = {2,1};
DRS_FILT_HW_X = cpl_propertylist_get_int(plist,"DRS_FILT_HW_X");
DRS_FILT_HW_Y = cpl_propertylist_get_int(plist,"DRS_FILT_HW_Y");
DRS_FILT_IMAX = cpl_propertylist_get_int(plist,"DRS_FILT_IMAX");
DRS_FILT_KS = cpl_propertylist_get_int(plist,"DRS_FILT_KS");
DRS_FILT_SAT_SW =cpl_propertylist_get_string(plist,"DRS_FILT_SAT_SW");
DRS_FILT_MASK = cpl_propertylist_get_string(plist,"DRS_FILT_MASK");
GAUSSFIBRESIGMA =cpl_propertylist_get_double(plist,"GAUSSFIBRESIGMA");
GAUSSHALFWIDTH =cpl_propertylist_get_double(plist,"GAUSSHALFWIDTH");
MAXYSHIFT =cpl_propertylist_get_double(plist,"MAXYSHIFT");
MAXBACKITERS =cpl_propertylist_get_int(plist,"MAXBACKITERS");
MAXDISCARDFRACT =cpl_propertylist_get_double(plist,"MAXDISCARDFRACT");
MAXCORRITERS =cpl_propertylist_get_int(plist,"MAXCORRITERS");
CORRELTOL =cpl_propertylist_get_double(plist,"CORRELTOL");
CORRELXSTEP =cpl_propertylist_get_int(plist,"CORRELXSTEP");
GAUSSCORRELSCL =cpl_propertylist_get_double(plist,"GAUSSCORRELSCL");
GAUSSCORRELWND =cpl_propertylist_get_double(plist,"GAUSSCORRELWND");
MAXCLEANITERS =cpl_propertylist_get_int(plist,"MAXCLEANITERS");
MAXSINGLEPXFRC =cpl_propertylist_get_double(plist,"MAXSINGLEPXFRC");
MAXOPTITERSINT =cpl_propertylist_get_int(plist,"MAXOPTITERSINT");
MINOPTITERSINT =cpl_propertylist_get_int(plist,"MINOPTITERSINT");
XKILLSIZE =cpl_propertylist_get_int(plist,"XKILLSIZE");
YKILLSIZE =cpl_propertylist_get_int(plist,"YKILLSIZE");
MAXORDER =cpl_propertylist_get_int(plist,"MAXORDER");
DYRANGE =cpl_propertylist_get_int(plist,"DYRANGE");
DYSTEP =cpl_propertylist_get_double(plist,"DYSTEP");
MASKTHRES =cpl_propertylist_get_double(plist,"MASKTHRES");
FRACSLICESTHRES =cpl_propertylist_get_double(plist,"FRACSLICESTHRES");
MAXROWS =cpl_propertylist_get_int(plist,"MAXROWS");
MAXCOLS =cpl_propertylist_get_int(plist,"MAXCOLS");
DRS_PTHRE_MAX =cpl_propertylist_get_int(plist,"DRS_PTHRE_MAX");
DRS_PTHRE_MIN =cpl_propertylist_get_int(plist,"DRS_PTHRE_MIN");
DRS_EXT_MTD = cpl_propertylist_get_string(plist,"DRS_EXT_MTD");
DRS_K_S_THRE =cpl_propertylist_get_double(plist,"DRS_K_S_THRE");
DRS_KSIGMA_THRE =cpl_propertylist_get_int(plist,"DRS_KSIGMA_THRE");
DRS_EXT_W_SIZ =cpl_propertylist_get_double(plist,"DRS_EXT_W_SIZ");
DRS_MIDAS2FITS = cpl_propertylist_get_string(plist,"DRS_MIDAS2FITS");
// <num>: constant value subtraction
DRS_BIAS_MTD = cpl_propertylist_get_string(plist,"DRS_BIAS_MTD");
DRS_FILT_SW = cpl_propertylist_get_string(plist,"DRS_FILT_SW");
DRS_VERBOSITY = cpl_propertylist_get_string(plist,"DRS_VERBOSITY");
DRS_CUBIFY = cpl_propertylist_get_string(plist,"DRS_CUBIFY");
//const char* DRS_VERBOSITY = "HIGH";
DRS_COR_MAX_FND = cpl_propertylist_get_string(plist,"DRS_COR_MAX_FND");
DRS_COR_DEF_RNG = cpl_propertylist_get_float(plist,"DRS_COR_DEF_RNG");
DRS_COR_DEF_PNT = cpl_propertylist_get_int(plist,"DRS_COR_DEF_PNT");
DRS_COR_DEF_OFF = cpl_propertylist_get_float(plist,"DRS_COR_DEF_OFF");
DRS_BASE_NAME = cpl_propertylist_get_string(plist,"DRS_BASE_NAME");
DRS_P8_OFPOS_S1_1 =cpl_propertylist_get_double(plist,"DRS_P8_OFPOS_S1_1");
DRS_P8_OFPOS_S1_2 =cpl_propertylist_get_double(plist,"DRS_P8_OFPOS_S1_2");
DRS_P8_OFPOS_S1_3 =cpl_propertylist_get_double(plist,"DRS_P8_OFPOS_S1_3");
DRS_SCAN_MIN_1 =cpl_propertylist_get_int(plist,"DRS_SCAN_MIN_1");
DRS_SCAN_MIN_2 =cpl_propertylist_get_int(plist,"DRS_SCAN_MIN_2");
DRS_SCAN_MIN_3 =cpl_propertylist_get_int(plist,"DRS_SCAN_MIN_3");
DRS_SCAN_MAX_1 =cpl_propertylist_get_int(plist,"DRS_SCAN_MAX_1");
DRS_SCAN_MAX_2 =cpl_propertylist_get_int(plist,"DRS_SCAN_MAX_2");
DRS_SCAN_MAX_3 =cpl_propertylist_get_int(plist,"DRS_SCAN_MAX_3");
DRS_DEL_SW = cpl_propertylist_get_string(plist,"DRS_DEL_SW");
FLAMES_DRS_SFF_HW_MIN=cpl_propertylist_get_int(plist,"FLAMES_DRS_SFF_HW_MIN");
DRS_CVEL_MIN =cpl_propertylist_get_double(plist,"DRS_CVEL_MIN");
DRS_CVEL_MAX =cpl_propertylist_get_double(plist,"DRS_CVEL_MAX");
DRS_CVEL_STEP =cpl_propertylist_get_double(plist,"DRS_CVEL_STEP");
//DRS_BLAZE_SW =cpl_propertylist_get_boolean(plist,"DRS_BLAZE_SW");
return cpl_error_get_code();
}
cpl_error_code
flames_save_drs_par(cpl_propertylist* plist)
{
//const int BKGPOL[2] = {4, 5};
cpl_propertylist_set_double(plist,"DECENTSNR",DECENTSNR);
cpl_propertylist_set_double(plist,"MATCHTHRES",MATCHTHRES);
cpl_propertylist_set_double(plist,"HALFIBREWIDTH",HALFIBREWIDTH);
cpl_propertylist_set_int(plist,"MAXFIBRES",MAXFIBRES);
cpl_propertylist_set_int(plist,"FLAMES_SAV_BORD_SZ",FLAMES_SAV_BORD_SZ);
cpl_propertylist_set_int(plist,"FLAMES_X_WIND_SIZE",FLAMES_X_WIND_SIZE);
cpl_propertylist_set_int(plist,"FLAMES_Y_WIND_SIZE",FLAMES_Y_WIND_SIZE);
cpl_propertylist_set_int(plist,"FLAMES_Y_SEARCH_WIND",FLAMES_Y_SEARCH_WIND);
cpl_propertylist_set_int(plist,"FLAMES_ORD_TRESH",FLAMES_ORD_TRESH);
cpl_propertylist_set_int(plist,"FLAMES_N_CLIP_MED",FLAMES_N_CLIP_MED);
cpl_propertylist_set_int(plist,"FLAMES_N_CLIP_AVG",FLAMES_N_CLIP_AVG);
cpl_propertylist_set_double(plist,"FLAMES_INT_TRESH",FLAMES_INT_TRESH);
cpl_propertylist_set_int(plist,"NBTRACES",NBTRACES);
cpl_propertylist_set_double(plist,"MINFIBREFRAC",MINFIBREFRAC);
cpl_propertylist_set_string(plist,"BKGFITINLINE",BKGFITINLINE);
cpl_propertylist_set_string(plist,"BKGFITMETHOD",BKGFITMETHOD);
cpl_propertylist_set_string(plist,"BKGBADSCAN",BKGBADSCAN);
//const int BKGBADWIN[2]={50,50};
cpl_propertylist_set_int(plist,"BKGBADWINX",BKGBADWINX);
cpl_propertylist_set_int(plist,"BKGBADWINY",BKGBADWINY);
cpl_propertylist_set_double(plist,"BKGBADMAXFRAC",BKGBADMAXFRAC);
cpl_propertylist_set_int(plist,"BKGBADMAXTOT",BKGBADMAXTOT);
cpl_propertylist_set_int(plist,"BKG_MAX_IO_WIN",BKG_MAX_IO_WIN);
//const int DRS_BKG_FIT_POL[2] = {4,5};
cpl_propertylist_set_int(plist,"DRS_BKG_FIT_POL_X",DRS_BKG_FIT_POL_X);
cpl_propertylist_set_int(plist,"DRS_BKG_FIT_POL_Y",DRS_BKG_FIT_POL_Y);
//const int DRS_FILT_HW[2] = {2,1};
cpl_propertylist_set_int(plist,"DRS_FILT_HW_X",DRS_FILT_HW_X);
cpl_propertylist_set_int(plist,"DRS_FILT_HW_Y",DRS_FILT_HW_Y);
cpl_propertylist_set_int(plist,"DRS_FILT_IMAX",DRS_FILT_IMAX);
cpl_propertylist_set_int(plist,"DRS_FILT_KS",DRS_FILT_KS);
cpl_propertylist_set_string(plist,"DRS_FILT_SAT_SW",DRS_FILT_SAT_SW);
cpl_propertylist_set_string(plist,"DRS_FILT_MASK",DRS_FILT_MASK);
cpl_propertylist_set_double(plist,"GAUSSFIBRESIGMA",GAUSSFIBRESIGMA);
cpl_propertylist_set_double(plist,"GAUSSHALFWIDTH",GAUSSHALFWIDTH);
cpl_propertylist_set_double(plist,"MAXYSHIFT",MAXYSHIFT);
cpl_propertylist_set_int(plist,"MAXBACKITERS",MAXBACKITERS);
cpl_propertylist_set_double(plist,"MAXDISCARDFRACT",MAXDISCARDFRACT);
cpl_propertylist_set_int(plist,"MAXCORRITERS",MAXCORRITERS);
cpl_propertylist_set_double(plist,"CORRELTOL",CORRELTOL);
cpl_propertylist_set_int(plist,"CORRELXSTEP",CORRELXSTEP);
cpl_propertylist_set_double(plist,"GAUSSCORRELSCL",GAUSSCORRELSCL);
cpl_propertylist_set_double(plist,"GAUSSCORRELWND",GAUSSCORRELWND);
cpl_propertylist_set_int(plist,"MAXCLEANITERS",MAXCLEANITERS);
cpl_propertylist_set_double(plist,"MAXSINGLEPXFRC",MAXSINGLEPXFRC);
cpl_propertylist_set_int(plist,"MAXOPTITERSINT",MAXOPTITERSINT);
cpl_propertylist_set_int(plist,"MINOPTITERSINT",MINOPTITERSINT);
cpl_propertylist_set_int(plist,"XKILLSIZE",XKILLSIZE);
cpl_propertylist_set_int(plist,"YKILLSIZE",YKILLSIZE);
cpl_propertylist_set_int(plist,"MAXORDER",MAXORDER);
cpl_propertylist_set_int(plist,"DYRANGE",DYRANGE);
cpl_propertylist_set_double(plist,"DYSTEP",DYSTEP);
cpl_propertylist_set_double(plist,"MASKTHRES",MASKTHRES);
cpl_propertylist_set_double(plist,"FRACSLICESTHRES",FRACSLICESTHRES);
cpl_propertylist_set_int(plist,"MAXROWS",MAXROWS);
cpl_propertylist_set_int(plist,"MAXCOLS",MAXCOLS);
cpl_propertylist_set_int(plist,"DRS_PTHRE_MAX",DRS_PTHRE_MAX);
cpl_propertylist_set_int(plist,"DRS_PTHRE_MIN",DRS_PTHRE_MIN);
cpl_propertylist_set_string(plist,"DRS_EXT_MTD",DRS_EXT_MTD);
cpl_propertylist_set_double(plist,"DRS_K_S_THRE",DRS_K_S_THRE);
cpl_propertylist_set_int(plist,"DRS_KSIGMA_THRE",DRS_KSIGMA_THRE);
cpl_propertylist_set_double(plist,"DRS_EXT_W_SIZ",DRS_EXT_W_SIZ);
cpl_propertylist_set_string(plist,"DRS_MIDAS2FITS",DRS_MIDAS2FITS);
// <num>: constant value subtraction
cpl_propertylist_set_string(plist,"DRS_BIAS_MTD",DRS_BIAS_MTD);
cpl_propertylist_set_string(plist,"DRS_FILT_SW",DRS_FILT_SW);
cpl_propertylist_set_string(plist,"DRS_VERBOSITY",DRS_VERBOSITY);
cpl_propertylist_set_string(plist,"DRS_CUBIFY",DRS_CUBIFY);
//const char* DRS_VERBOSITY = "HIGH";
cpl_propertylist_set_string(plist,"DRS_COR_MAX_FND",DRS_COR_MAX_FND);
cpl_propertylist_set_float(plist,"DRS_COR_DEF_RNG",DRS_COR_DEF_RNG);
cpl_propertylist_set_int(plist,"DRS_COR_DEF_PNT",DRS_COR_DEF_PNT);
cpl_propertylist_set_float(plist,"DRS_COR_DEF_OFF",DRS_COR_DEF_OFF);
cpl_propertylist_set_string(plist,"DRS_BASE_NAME",DRS_BASE_NAME);
cpl_propertylist_set_double(plist,"DRS_P8_OFPOS_S1_1",DRS_P8_OFPOS_S1_1);
cpl_propertylist_set_double(plist,"DRS_P8_OFPOS_S1_2",DRS_P8_OFPOS_S1_2);
cpl_propertylist_set_double(plist,"DRS_P8_OFPOS_S1_3",DRS_P8_OFPOS_S1_3);
cpl_propertylist_set_int(plist,"DRS_SCAN_MIN_1",DRS_SCAN_MIN_1);
cpl_propertylist_set_int(plist,"DRS_SCAN_MIN_2",DRS_SCAN_MIN_2);
cpl_propertylist_set_int(plist,"DRS_SCAN_MIN_3",DRS_SCAN_MIN_3);
cpl_propertylist_set_int(plist,"DRS_SCAN_MAX_1",DRS_SCAN_MAX_1);
cpl_propertylist_set_int(plist,"DRS_SCAN_MAX_2",DRS_SCAN_MAX_2);
cpl_propertylist_set_int(plist,"DRS_SCAN_MAX_3",DRS_SCAN_MAX_3);
cpl_propertylist_set_string(plist,"DRS_DEL_SW",DRS_DEL_SW);
cpl_propertylist_set_int(plist,"FLAMES_DRS_SFF_HW_MIN",FLAMES_DRS_SFF_HW_MIN);
cpl_propertylist_set_double(plist,"DRS_CVEL_MIN",DRS_CVEL_MIN);
cpl_propertylist_set_double(plist,"DRS_CVEL_MAX",DRS_CVEL_MAX);
cpl_propertylist_set_double(plist,"DRS_CVEL_STEP",DRS_CVEL_STEP);
//cpl_propertylist_set_boolean(plist,"DRS_BLAZE_SW",DRS_BLAZE_SW);
return cpl_error_get_code();
}
/**@}*/
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