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#!/bin/bash
. ../MasterTest.sh
CleanFiles rms.in rmscorr.dat rmscorr.10.dat rmscorr.first.dat
TESTNAME='RmsAvgCorr tests'
Requires netcdf
INPUT="-i rms.in"
# Single reference
cat > rms.in <<EOF
parm ../tz2.parm7
trajin ../tz2.nc
strip !(:2-12@CA)
parm strip.tz2.parm7 [strip]
reference avg.CA.rst7 parm [strip]
rmsavgcorr out rmscorr.dat R2-12 ref avg.CA.rst7
rmsavgcorr out rmscorr.10.dat Off10 offset 10 reference
EOF
RunCpptraj "RmsAvgCorr Reference"
DoTest rmscorr.dat.save rmscorr.dat
DoTest rmscorr.10.dat.save rmscorr.10.dat
# First running avgd frame
cat > rms.in <<EOF
parm ../tz2.parm7
trajin ../tz2.nc
strip !(:2-12@CA)
rmsavgcorr out rmscorr.first.dat First first
EOF
RunCpptraj "RmsAvgCorr First"
DoTest rmscorr.first.dat.save rmscorr.first.dat
EndTest
exit 0
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