File: ala3.psf

package info (click to toggle)
cpptraj 5.1.0%2Bdfsg-5
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 139,188 kB
  • sloc: cpp: 145,622; ansic: 34,635; sh: 11,365; f90: 971; makefile: 770; awk: 242
file content (179 lines) | stat: -rw-r--r-- 11,623 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
PSF CMAP CHEQ

       2 !NTITLE
* BETA HARPIN IN IMPLICIT SOLVENT                                               
*  DATE:    11/22/10     16:54: 9      CREATED BY USER: aokur                   

      42 !NATOM
       1 ALA3 1    ALA  CAY    24  -0.270000       12.0110           0   0.00000     -0.301140E-02
       2 ALA3 1    ALA  HY1     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
       3 ALA3 1    ALA  HY2     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
       4 ALA3 1    ALA  HY3     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
       5 ALA3 1    ALA  CY     20   0.510000       12.0110           0   0.00000     -0.301140E-02
       6 ALA3 1    ALA  OY     70  -0.510000       15.9990           0   0.00000     -0.301140E-02
       7 ALA3 1    ALA  N      54  -0.470000       14.0070           0   0.00000     -0.301140E-02
       8 ALA3 1    ALA  HN      1   0.310000       1.00800           0   0.00000     -0.301140E-02
       9 ALA3 1    ALA  CA     22   0.700000E-01   12.0110           0   0.00000     -0.301140E-02
      10 ALA3 1    ALA  HA      6   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      11 ALA3 1    ALA  CB     24  -0.270000       12.0110           0   0.00000     -0.301140E-02
      12 ALA3 1    ALA  HB1     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      13 ALA3 1    ALA  HB2     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      14 ALA3 1    ALA  HB3     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      15 ALA3 1    ALA  C      20   0.510000       12.0110           0   0.00000     -0.301140E-02
      16 ALA3 1    ALA  O      70  -0.510000       15.9990           0   0.00000     -0.301140E-02
      17 ALA3 2    ALA  N      54  -0.470000       14.0070           0   0.00000     -0.301140E-02
      18 ALA3 2    ALA  HN      1   0.310000       1.00800           0   0.00000     -0.301140E-02
      19 ALA3 2    ALA  CA     22   0.700000E-01   12.0110           0   0.00000     -0.301140E-02
      20 ALA3 2    ALA  HA      6   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      21 ALA3 2    ALA  CB     24  -0.270000       12.0110           0   0.00000     -0.301140E-02
      22 ALA3 2    ALA  HB1     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      23 ALA3 2    ALA  HB2     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      24 ALA3 2    ALA  HB3     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      25 ALA3 2    ALA  C      20   0.510000       12.0110           0   0.00000     -0.301140E-02
      26 ALA3 2    ALA  O      70  -0.510000       15.9990           0   0.00000     -0.301140E-02
      27 ALA3 3    ALA  N      54  -0.470000       14.0070           0   0.00000     -0.301140E-02
      28 ALA3 3    ALA  HN      1   0.310000       1.00800           0   0.00000     -0.301140E-02
      29 ALA3 3    ALA  CA     22   0.700000E-01   12.0110           0   0.00000     -0.301140E-02
      30 ALA3 3    ALA  HA      6   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      31 ALA3 3    ALA  CB     24  -0.270000       12.0110           0   0.00000     -0.301140E-02
      32 ALA3 3    ALA  HB1     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      33 ALA3 3    ALA  HB2     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      34 ALA3 3    ALA  HB3     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      35 ALA3 3    ALA  C      20   0.510000       12.0110           0   0.00000     -0.301140E-02
      36 ALA3 3    ALA  O      70  -0.510000       15.9990           0   0.00000     -0.301140E-02
      37 ALA3 3    ALA  NT     54  -0.470000       14.0070           0   0.00000     -0.301140E-02
      38 ALA3 3    ALA  HNT     1   0.310000       1.00800           0   0.00000     -0.301140E-02
      39 ALA3 3    ALA  CAT    24  -0.110000       12.0110           0   0.00000     -0.301140E-02
      40 ALA3 3    ALA  HT1     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      41 ALA3 3    ALA  HT2     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02
      42 ALA3 3    ALA  HT3     3   0.900000E-01   1.00800           0   0.00000     -0.301140E-02

      41 !NBOND: bonds
       5       1       5       7       1       2       1       3
       1       4       6       5      11       9       7       8
       7       9      15       9      15      17       9      10
      11      12      11      13      11      14      16      15
      21      19      17      18      17      19      25      19
      25      27      19      20      21      22      21      23
      21      24      26      25      31      29      27      28
      27      29      35      29      29      30      31      32
      31      33      31      34      36      35      35      37
      37      38      37      39      39      40      39      41
      39      42

      72 !NTHETA: angles
       2       1       3       2       1       4       2       1       5
       3       1       4       3       1       5       4       1       5
       1       5       6       1       5       7       6       5       7
       5       7       8       5       7       9       8       7       9
       7       9      10       7       9      11       7       9      15
      10       9      11      10       9      15      11       9      15
       9      11      12       9      11      13       9      11      14
      12      11      13      12      11      14      13      11      14
       9      15      16       9      15      17      16      15      17
      15      17      18      15      17      19      18      17      19
      17      19      20      17      19      21      17      19      25
      20      19      21      20      19      25      21      19      25
      19      21      22      19      21      23      19      21      24
      22      21      23      22      21      24      23      21      24
      19      25      26      19      25      27      26      25      27
      25      27      28      25      27      29      28      27      29
      27      29      30      27      29      31      27      29      35
      30      29      31      30      29      35      31      29      35
      29      31      32      29      31      33      29      31      34
      32      31      33      32      31      34      33      31      34
      29      35      36      29      35      37      36      35      37
      35      37      38      35      37      39      38      37      39
      37      39      40      37      39      41      37      39      42
      40      39      41      40      39      42      41      39      42

      91 !NPHI: dihedrals
       1       5       7       8       1       5       7       9
       2       1       5       6       2       1       5       7
       3       1       5       6       3       1       5       7
       4       1       5       6       4       1       5       7
       5       7       9      10       5       7       9      11
       5       7       9      15       6       5       7       8
       6       5       7       9       7       9      11      12
       7       9      11      13       7       9      11      14
       7       9      15      16       7       9      15      17
       8       7       9      10       8       7       9      11
       8       7       9      15       9      15      17      18
       9      15      17      19      10       9      11      12
      10       9      11      13      10       9      11      14
      10       9      15      16      10       9      15      17
      11       9      15      16      11       9      15      17
      12      11       9      15      13      11       9      15
      14      11       9      15      15      17      19      20
      15      17      19      21      15      17      19      25
      16      15      17      18      16      15      17      19
      17      19      21      22      17      19      21      23
      17      19      21      24      17      19      25      26
      17      19      25      27      18      17      19      20
      18      17      19      21      18      17      19      25
      19      25      27      28      19      25      27      29
      20      19      21      22      20      19      21      23
      20      19      21      24      20      19      25      26
      20      19      25      27      21      19      25      26
      21      19      25      27      22      21      19      25
      23      21      19      25      24      21      19      25
      25      27      29      30      25      27      29      31
      25      27      29      35      26      25      27      28
      26      25      27      29      27      29      31      32
      27      29      31      33      27      29      31      34
      27      29      35      36      27      29      35      37
      28      27      29      30      28      27      29      31
      28      27      29      35      29      35      37      38
      29      35      37      39      30      29      31      32
      30      29      31      33      30      29      31      34
      30      29      35      36      30      29      35      37
      31      29      35      36      31      29      35      37
      32      31      29      35      33      31      29      35
      34      31      29      35      35      37      39      40
      35      37      39      41      35      37      39      42
      36      35      37      38      36      35      37      39
      38      37      39      40      38      37      39      41
      38      37      39      42

      11 !NIMPHI: impropers
       5       1       7       6       7       5       9       8
      15       9      17      16       9       7      15      11
      17      15      19      18      25      19      27      26
      19      17      25      21      27      25      29      28
      29      27      35      31      37      35      39      38
      35      29      37      36

       4 !NDON: donors
       7       8      17      18      27      28      37      38

       4 !NACC: acceptors
       6       5      16      15      26      25      36      35

       0 !NNB

       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0
       0       0

      12       0 !NGRP NST2
       0       1       0       4       1       0       6       1       0
      10       1       0      14       1       0      16       1       0
      20       1       0      24       1       0      26       1       0
      30       1       0      34       1       0      36       1       0

       1 !MOLNT
       1       1       1       1       1       1       1       1
       1       1       1       1       1       1       1       1
       1       1       1       1       1       1       1       1
       1       1       1       1       1       1       1       1
       1       1       1       1       1       1       1       1
       1       1

       0       0 !NUMLP NUMLPH

       2 !NCRTERM: cross-terms
      15      17      19      25      17      19      25      27
      25      27      29      35      27      29      35      37