File: reorder.outoforder.parm7.save

package info (click to toggle)
cpptraj 5.1.0%2Bdfsg-5
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 139,188 kB
  • sloc: cpp: 145,622; ansic: 34,635; sh: 11,365; f90: 971; makefile: 770; awk: 242
file content (462 lines) | stat: -rw-r--r-- 35,770 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
%VERSION  VERSION_STAMP = V0001.000  DATE = 12/21/14  11:44:38                  
%FLAG TITLE                                                                     
%FORMAT(20a4)                                                                   
ACE                                                                             
%FLAG POINTERS                                                                  
%FORMAT(10I8)                                                                   
      66       8      34      30      73      37     129      80       0       0
     307       9      30      37      80      13      25      22       9       0
       0       0       0       0       0       0       0       0      10       0
       0
%FLAG ATOM_NAME                                                                 
%FORMAT(20a4)                                                                   
HH31CH3 HH32HH33C   O   N   H   CA  HA  CB  HB2 HB3 SG  C   O   N   H   CH3 HH31
HH32HH33HH31CH3 HH32HH33C   O   N   H   CA  HA  CB  HB2 HB3 SG  C   O   N   H   
CH3 HH31HH32HH33HH31CH3 HH32HH33C   O   N   H   CA  HA  CB  HB1 HB2 HB3 C   O   
N   H   CH3 HH31HH32HH33
%FLAG CHARGE                                                                    
%FORMAT(5E16.8)                                                                 
  2.04636429E+00 -6.67300626E+00  2.04636429E+00  2.04636429E+00  1.08823576E+01
 -1.03484442E+01 -7.57501011E+00  4.95464337E+00  7.81736670E-01  1.39582818E+00
 -1.43956170E+00  1.65822930E+00  1.65822930E+00 -1.96983063E+00  1.08841798E+01
 -1.03484442E+01 -7.57501011E+00  4.95464337E+00 -2.71512270E+00  1.77849648E+00
  1.77849648E+00  1.77849648E+00  2.04636429E+00 -6.67300626E+00  2.04636429E+00
  2.04636429E+00  1.08823576E+01 -1.03484442E+01 -7.57501011E+00  4.95464337E+00
  7.81736670E-01  1.39582818E+00 -1.43956170E+00  1.65822930E+00  1.65822930E+00
 -1.96983063E+00  1.08841798E+01 -1.03484442E+01 -7.57501011E+00  4.95464337E+00
 -2.71512270E+00  1.77849648E+00  1.77849648E+00  1.77849648E+00  2.04636429E+00
 -6.67300626E+00  2.04636429E+00  2.04636429E+00  1.08823576E+01 -1.03484442E+01
 -7.57501011E+00  4.95464337E+00  6.14091510E-01  1.49969529E+00 -3.32556975E+00
  1.09880469E+00  1.09880469E+00  1.09880469E+00  1.08841798E+01 -1.03484442E+01
 -7.57501011E+00  4.95464337E+00 -2.71512270E+00  1.77849648E+00  1.77849648E+00
  1.77849648E+00
%FLAG ATOMIC_NUMBER                                                             
%FORMAT(10I8)                                                                   
       1       6       1       1       6       8       7       1       6       1
       6       1       1      16       6       8       7       1       6       1
       1       1       1       6       1       1       6       8       7       1
       6       1       6       1       1      16       6       8       7       1
       6       1       1       1       1       6       1       1       6       8
       7       1       6       1       6       1       1       1       6       8
       7       1       6       1       1       1
%FLAG MASS                                                                      
%FORMAT(5E16.8)                                                                 
  1.00800000E+00  1.20100000E+01  1.00800000E+00  1.00800000E+00  1.20100000E+01
  1.60000000E+01  1.40100000E+01  1.00800000E+00  1.20100000E+01  1.00800000E+00
  1.20100000E+01  1.00800000E+00  1.00800000E+00  3.20600000E+01  1.20100000E+01
  1.60000000E+01  1.40100000E+01  1.00800000E+00  1.20100000E+01  1.00800000E+00
  1.00800000E+00  1.00800000E+00  1.00800000E+00  1.20100000E+01  1.00800000E+00
  1.00800000E+00  1.20100000E+01  1.60000000E+01  1.40100000E+01  1.00800000E+00
  1.20100000E+01  1.00800000E+00  1.20100000E+01  1.00800000E+00  1.00800000E+00
  3.20600000E+01  1.20100000E+01  1.60000000E+01  1.40100000E+01  1.00800000E+00
  1.20100000E+01  1.00800000E+00  1.00800000E+00  1.00800000E+00  1.00800000E+00
  1.20100000E+01  1.00800000E+00  1.00800000E+00  1.20100000E+01  1.60000000E+01
  1.40100000E+01  1.00800000E+00  1.20100000E+01  1.00800000E+00  1.20100000E+01
  1.00800000E+00  1.00800000E+00  1.00800000E+00  1.20100000E+01  1.60000000E+01
  1.40100000E+01  1.00800000E+00  1.20100000E+01  1.00800000E+00  1.00800000E+00
  1.00800000E+00
%FLAG ATOM_TYPE_INDEX                                                           
%FORMAT(10I8)                                                                   
       1       2       1       1       3       4       5       6       2       7
       2       7       7       8       3       4       5       6       2       7
       7       7       1       2       1       1       3       4       5       6
       2       7       2       7       7       8       3       4       5       6
       2       7       7       7       1       2       1       1       3       4
       5       6       2       7       2       1       1       1       3       4
       5       6       2       7       7       7
%FLAG NUMBER_EXCLUDED_ATOMS                                                     
%FORMAT(10I8)                                                                   
       6       7       4       3       7       3      10       4      11       7
       8       4       3       6       7       3       5       4       3       2
       1       1       6       7       4       3       7       3      10       4
      10       7       6       3       2       1       7       3       5       4
       3       2       1       1       6       7       4       3       7       3
      10       4      10       7       6       3       2       1       7       3
       5       4       3       2       1       1
%FLAG NONBONDED_PARM_INDEX                                                      
%FORMAT(10I8)                                                                   
       1       2       4       7      11      16      22      29       2       3
       5       8      12      17      23      30       4       5       6       9
      13      18      24      31       7       8       9      10      14      19
      25      32      11      12      13      14      15      20      26      33
      16      17      18      19      20      21      27      34      22      23
      24      25      26      27      28      35      29      30      31      32
      33      34      35      36
%FLAG RESIDUE_LABEL                                                             
%FORMAT(20a4)                                                                   
ACE CYX NME ACE CYX NME ACE ALA NME 
%FLAG RESIDUE_POINTER                                                           
%FORMAT(10I8)                                                                   
       1       7      17      23      29      39      45      51      61
%FLAG BOND_FORCE_CONSTANT                                                       
%FORMAT(5E16.8)                                                                 
  3.37000000E+02  3.37000000E+02  3.10000000E+02  2.27000000E+02  1.66000000E+02
  3.17000000E+02  4.90000000E+02  5.70000000E+02  3.17000000E+02  4.34000000E+02
  3.40000000E+02  3.40000000E+02  3.40000000E+02
%FLAG BOND_EQUIL_VALUE                                                          
%FORMAT(5E16.8)                                                                 
  1.44900000E+00  1.44900000E+00  1.52600000E+00  1.81000000E+00  2.03800000E+00
  1.52200000E+00  1.33500000E+00  1.22900000E+00  1.52200000E+00  1.01000000E+00
  1.09000000E+00  1.09000000E+00  1.09000000E+00
%FLAG ANGLE_FORCE_CONSTANT                                                      
%FORMAT(5E16.8)                                                                 
  7.00000000E+01  8.00000000E+01  6.80000000E+01  5.00000000E+01  6.30000000E+01
  6.30000000E+01  5.00000000E+01  8.00000000E+01  8.00000000E+01  7.00000000E+01
  5.00000000E+01  8.00000000E+01  5.00000000E+01  5.00000000E+01  3.50000000E+01
  5.00000000E+01  5.00000000E+01  5.00000000E+01  5.00000000E+01  5.00000000E+01
  5.00000000E+01  5.00000000E+01  3.50000000E+01  5.00000000E+01  5.00000000E+01
%FLAG ANGLE_EQUIL_VALUE                                                         
%FORMAT(5E16.8)                                                                 
  2.03505478E+00  1.91462701E+00  1.80990721E+00  2.00189351E+00  1.92160833E+00
  1.93906163E+00  2.12755727E+00  2.10137732E+00  2.14501057E+00  2.03505478E+00
  2.12755727E+00  2.10137732E+00  2.06018753E+00  1.91113635E+00  1.91113635E+00
  2.06018753E+00  1.91113635E+00  1.91113635E+00  1.91113635E+00  1.91113635E+00
  1.91113635E+00  2.09439600E+00  1.91113635E+00  1.91113635E+00  1.91113635E+00
%FLAG DIHEDRAL_FORCE_CONSTANT                                                   
%FORMAT(5E16.8)                                                                 
  4.50000000E-01  1.58000000E+00  5.50000000E-01  0.00000000E+00  3.33333333E-01
  2.50000000E+00  2.00000000E-01  2.00000000E-01  4.00000000E-01  3.50000000E+00
  6.00000000E-01  1.55555556E-01  0.00000000E+00  2.00000000E+00  2.00000000E+00
  0.00000000E+00  2.70000000E-01  4.20000000E-01  1.05000000E+01  8.00000000E-01
  8.00000000E-02  1.10000000E+00
%FLAG DIHEDRAL_PERIODICITY                                                      
%FORMAT(5E16.8)                                                                 
  1.00000000E+00  2.00000000E+00  3.00000000E+00  4.00000000E+00  3.00000000E+00
  2.00000000E+00  1.00000000E+00  2.00000000E+00  3.00000000E+00  2.00000000E+00
  3.00000000E+00  3.00000000E+00  2.00000000E+00  1.00000000E+00  2.00000000E+00
  1.00000000E+00  2.00000000E+00  3.00000000E+00  2.00000000E+00  1.00000000E+00
  3.00000000E+00  2.00000000E+00
%FLAG DIHEDRAL_PHASE                                                            
%FORMAT(5E16.8)                                                                 
  3.14159400E+00  3.14159400E+00  3.14159400E+00  0.00000000E+00  0.00000000E+00
  3.14159400E+00  0.00000000E+00  0.00000000E+00  0.00000000E+00  0.00000000E+00
  0.00000000E+00  0.00000000E+00  0.00000000E+00  0.00000000E+00  0.00000000E+00
  0.00000000E+00  0.00000000E+00  0.00000000E+00  3.14159400E+00  0.00000000E+00
  3.14159400E+00  3.14159400E+00
%FLAG SCEE_SCALE_FACTOR                                                         
%FORMAT(5E16.8)                                                                 
  1.20000000E+00  1.20000000E+00  1.20000000E+00  1.20000000E+00  1.20000000E+00
  1.20000000E+00  1.20000000E+00  1.20000000E+00  1.20000000E+00  1.20000000E+00
  1.20000000E+00  1.20000000E+00  1.20000000E+00  1.20000000E+00  1.20000000E+00
  1.20000000E+00  1.20000000E+00  1.20000000E+00  0.00000000E+00  1.20000000E+00
  1.20000000E+00  0.00000000E+00
%FLAG SCNB_SCALE_FACTOR                                                         
%FORMAT(5E16.8)                                                                 
  2.00000000E+00  2.00000000E+00  2.00000000E+00  2.00000000E+00  2.00000000E+00
  2.00000000E+00  2.00000000E+00  2.00000000E+00  2.00000000E+00  2.00000000E+00
  2.00000000E+00  2.00000000E+00  2.00000000E+00  2.00000000E+00  2.00000000E+00
  2.00000000E+00  2.00000000E+00  2.00000000E+00  0.00000000E+00  2.00000000E+00
  2.00000000E+00  0.00000000E+00
%FLAG SOLTY                                                                     
%FORMAT(5E16.8)                                                                 
  0.00000000E+00  0.00000000E+00  0.00000000E+00  0.00000000E+00  0.00000000E+00
  0.00000000E+00  0.00000000E+00  0.00000000E+00  0.00000000E+00
%FLAG LENNARD_JONES_ACOEF                                                       
%FORMAT(5E16.8)                                                                 
  7.51607703E+03  9.71708117E+04  1.04308023E+06  8.61541883E+04  9.24822270E+05
  8.19971662E+05  5.44261042E+04  6.47841731E+05  5.74393458E+05  3.79876399E+05
  8.96776989E+04  9.95480466E+05  8.82619071E+05  6.06829342E+05  9.44293233E+05
  1.07193646E+02  2.56678134E+03  2.27577561E+03  1.02595236E+03  2.12601181E+03
  1.39982777E-01  4.98586848E+03  6.78771368E+04  6.01816484E+04  3.69471530E+04
  6.20665997E+04  5.94667300E+01  3.25969625E+03  2.02461849E+05  2.09861767E+06
  1.86068943E+06  1.32911052E+06  2.01562190E+06  5.97860700E+03  1.42791446E+05
  4.19430400E+06
%FLAG LENNARD_JONES_BCOEF                                                       
%FORMAT(5E16.8)                                                                 
  2.17257828E+01  1.26919150E+02  6.75612247E+02  1.12529845E+02  5.99015525E+02
  5.31102864E+02  1.11805549E+02  6.26720080E+02  5.55666448E+02  5.64885984E+02
  1.36131731E+02  7.36907417E+02  6.53361429E+02  6.77220874E+02  8.01323529E+02
  2.59456373E+00  2.06278363E+01  1.82891803E+01  1.53505284E+01  2.09604198E+01
  9.37598976E-02  1.76949863E+01  1.06076943E+02  9.40505980E+01  9.21192136E+01
  1.13252061E+02  1.93248820E+00  1.43076527E+01  2.25248294E+02  1.17824605E+03
  1.04466382E+03  1.10369829E+03  1.28923404E+03  3.87070358E+01  1.89165096E+02
  2.04800000E+03
%FLAG BONDS_INC_HYDROGEN                                                        
%FORMAT(10I8)                                                                   
      51      48      10      57      54      11      60      54      11      63
      54      11      21      18      10      27      24      12      33      30
      11      36      30      11       3       0      13       6       3      13
       9       3      13     135     132      13     138     135      13     141
     135      13     153     150      10     159     156      12     165     162
      13     168     162      13     171     162      13     183     180      10
     189     186      11     192     186      11     195     186      11      69
      66      13      72      69      13      75      69      13      87      84
      10      93      90      12      99      96      11     102      96      11
     117     114      10     123     120      11     126     120      11     129
     120      11
%FLAG BONDS_WITHOUT_HYDROGEN                                                    
%FORMAT(10I8)                                                                   
      54      48       1      24      18       2      30      24       3      39
      30       4      39     105       5      42      24       6      42      48
       7      45      42       8      12       3       9      12      18       7
      15      12       8     144     135       9     144     150       7     147
     144       8     156     150       2     162     156       3     174     156
       6     174     180       7     177     174       8     186     180       1
      78      69       9      78      84       7      81      78       8      90
      84       2      96      90       3     105      96       4     108      90
       6     108     114       7     111     108       8     120     114       1
%FLAG ANGLES_INC_HYDROGEN                                                       
%FORMAT(10I8)                                                                   
      54      48      51      13      57      54      48      14      60      54
      48      14      60      54      57      15      63      54      48      14
      63      54      57      15      63      54      60      15      24      18
      21      16      27      24      18      17      30      24      27      18
      33      30      24      19      36      30      24      19      36      30
      33      15      39      30      33      20      39      30      36      20
      42      24      27      21      42      48      51      22       6       3
       0      23       9       3       0      23       9       3       6      23
      12       3       0      24      12       3       6      24      12       3
       9      24      12      18      21      22     138     135     132      23
     141     135     132      23     141     135     138      23     144     135
     132      24     144     135     138      24     144     135     141      24
     144     150     153      22     156     150     153      16     159     156
     150      17     162     156     159      18     165     162     156      25
     168     162     156      25     168     162     165      23     171     162
     156      25     171     162     165      23     171     162     168      23
     174     156     159      21     174     180     183      22     186     180
     183      13     189     186     180      14     192     186     180      14
     192     186     189      15     195     186     180      14     195     186
     189      15     195     186     192      15      72      69      66      23
      75      69      66      23      75      69      72      23      78      69
      66      24      78      69      72      24      78      69      75      24
      78      84      87      22      90      84      87      16      93      90
      84      17      96      90      93      18      99      96      90      19
     102      96      90      19     102      96      99      15     105      96
      99      20     105      96     102      20     108      90      93      21
     108     114     117      22     120     114     117      13     123     120
     114      14     126     120     114      14     126     120     123      15
     129     120     114      14     129     120     123      15     129     120
     126      15
%FLAG ANGLES_WITHOUT_HYDROGEN                                                   
%FORMAT(10I8)                                                                   
      24      42      48       1      30      24      18       2      30      39
     105       3      39      30      24       4      39     105      96       3
      42      24      18       5      42      24      30       6      42      48
      54       7      45      42      24       8      45      42      48       9
       3      12      18      10      12      18      24      11      15      12
       3      12      15      12      18       9     135     144     150      10
     144     150     156      11     147     144     135      12     147     144
     150       9     156     174     180       1     162     156     150       2
     174     156     150       5     174     156     162       6     174     180
     186       7     177     174     156       8     177     174     180       9
      69      78      84      10      78      84      90      11      81      78
      69      12      81      78      84       9      90     108     114       1
      96      90      84       2     105      96      90       4     108      90
      84       5     108      90      96       6     108     114     120       7
     111     108      90       8     111     108     114       9
%FLAG DIHEDRALS_INC_HYDROGEN                                                    
%FORMAT(10I8)                                                                   
      57      54      48      51      13      60      54      48      51      13
      63      54      48      51      13      24      42      48      51       6
      27      24      18      21      13      27      24      42      48      13
      30      24      18      21      13      33      30      24      18      12
      33      30      24      27      12      33      30      39     105       5
      36      30      24      18      12      36      30      24      27      12
      36      30      39     105       5      39      30      24      27      12
      39     105      96      99       5      39     105      96     102       5
      42      24      18      21      13      42      24      30      33      12
      42      24      30      36      12      42      48      54      57      13
      42      48      54      60      13      42      48      54      63      13
      45      42      24      27      20      45      42     -24      27      13
      45      42     -24      27      21      45      42      48      51      14
      45      42     -48      51       6       0       3      12      18      13
       3      12      18      21       6       6       3      12      18      13
       9       3      12      18      13      12      18      24      27      13
       0       3      12      15      20       0       3     -12      15      13
       0       3     -12      15      21      15      12       3       6      20
      15      12      -3       6      13      15      12      -3       6      21
      15      12       3       9      20      15      12      -3       9      13
      15      12      -3       9      21      15      12      18      21      14
      15      12     -18      21       6     132     135     144     150      13
     135     144     150     153       6     138     135     144     150      13
     141     135     144     150      13     144     150     156     159      13
     147     144     135     132      20     147     144    -135     132      13
     147     144    -135     132      21     147     144     135     138      20
     147     144    -135     138      13     147     144    -135     138      21
     147     144     135     141      20     147     144    -135     141      13
     147     144    -135     141      21     147     144     150     153      14
     147     144    -150     153       6     156     174     180     183       6
     159     156     150     153      13     159     156     174     180      13
     162     156     150     153      13     165     162     156     150      12
     165     162     156     159      12     168     162     156     150      12
     168     162     156     159      12     171     162     156     150      12
     171     162     156     159      12     174     156     150     153      13
     174     156     162     165      12     174     156     162     168      12
     174     156     162     171      12     174     180     186     189      13
     174     180     186     192      13     174     180     186     195      13
     177     174     156     159      20     177     174    -156     159      13
     177     174    -156     159      21     177     174     180     183      14
     177     174    -180     183       6     189     186     180     183      13
     192     186     180     183      13     195     186     180     183      13
      66      69      78      84      13      69      78      84      87       6
      72      69      78      84      13      75      69      78      84      13
      78      84      90      93      13      81      78      69      66      20
      81      78     -69      66      13      81      78     -69      66      21
      81      78      69      72      20      81      78     -69      72      13
      81      78     -69      72      21      81      78      69      75      20
      81      78     -69      75      13      81      78     -69      75      21
      81      78      84      87      14      81      78     -84      87       6
      90     108     114     117       6      93      90      84      87      13
      93      90     108     114      13      96      90      84      87      13
      99      96      90      84      12      99      96      90      93      12
     102      96      90      84      12     102      96      90      93      12
     105      96      90      93      12     108      90      84      87      13
     108      90      96      99      12     108      90      96     102      12
     108     114     120     123      13     108     114     120     126      13
     108     114     120     129      13     111     108      90      93      20
     111     108     -90      93      13     111     108     -90      93      21
     111     108     114     117      14     111     108    -114     117       6
     123     120     114     117      13     126     120     114     117      13
     129     120     114     117      13      42      54     -48     -51      22
      12      24     -18     -21      22     144     156    -150    -153      22
     174     186    -180    -183      22      78      90     -84     -87      22
     108     120    -114    -117      22
%FLAG DIHEDRALS_WITHOUT_HYDROGEN                                                
%FORMAT(10I8)                                                                   
      18      24      42      48       1      18      24     -42      48       2
      18      24     -42      48       3      18      24     -42      48       4
      24      30      39     105       5      24      42      48      54       6
      30      24      42      48       7      30      24     -42      48       8
      30      24     -42      48       9      30      24     -42      48       4
      30      39     105      96      10      30      39    -105      96      11
      39      30      24      18      12      39     105      96      90       5
      42      24      30      39      12      45      42      24      18      13
      45      42      24      30      13      45      42      48      54       6
       3      12      18      24       6      12      18      24      30      14
      12      18     -24      30      15      12      18     -24      30       9
      12      18     -24      30       4      12      18      24      42      16
      12      18     -24      42      17      12      18     -24      42      18
      12      18     -24      42       4      15      12      18      24       6
     135     144     150     156       6     144     150     156     162      14
     144     150    -156     162      15     144     150    -156     162       9
     144     150    -156     162       4     144     150     156     174      16
     144     150    -156     174      17     144     150    -156     174      18
     144     150    -156     174       4     147     144     150     156       6
     150     156     174     180       1     150     156    -174     180       2
     150     156    -174     180       3     150     156    -174     180       4
     156     174     180     186       6     162     156     174     180       7
     162     156    -174     180       8     162     156    -174     180       9
     162     156    -174     180       4     177     174     156     150      13
     177     174     156     162      13     177     174     180     186       6
      69      78      84      90       6      78      84      90      96      14
      78      84     -90      96      15      78      84     -90      96       9
      78      84     -90      96       4      78      84      90     108      16
      78      84     -90     108      17      78      84     -90     108      18
      78      84     -90     108       4      81      78      84      90       6
      84      90     108     114       1      84      90    -108     114       2
      84      90    -108     114       3      84      90    -108     114       4
      90     108     114     120       6      96      90     108     114       7
      96      90    -108     114       8      96      90    -108     114       9
      96      90    -108     114       4     105      96      90      84      12
     108      90      96     105      12     111     108      90      84      13
     111     108      90      96      13     111     108     114     120       6
      24      48     -42     -45      19       3      18     -12     -15      19
     135     150    -144    -147      19     156     180    -174    -177      19
      69      84     -78     -81      19      90     114    -108    -111      19
%FLAG EXCLUDED_ATOMS_LIST                                                       
%FORMAT(10I8)                                                                   
       2       3       4       5       6       7       3       4       5       6
       7       8       9       4       5       6       7       5       6       7
       6       7       8       9      10      11      15       7       8       9
       8       9      10      11      12      13      14      15      16      17
       9      10      11      15      10      11      12      13      14      15
      16      17      18      19      36      11      12      13      14      15
      16      17      12      13      14      15      16      17      33      36
      13      14      15      36      14      15      36      15      31      33
      34      35      36      16      17      18      19      20      21      22
      17      18      19      18      19      20      21      22      19      20
      21      22      20      21      22      21      22      22       0      24
      25      26      27      28      29      25      26      27      28      29
      30      31      26      27      28      29      27      28      29      28
      29      30      31      32      33      37      29      30      31      30
      31      32      33      34      35      36      37      38      39      31
      32      33      37      32      33      34      35      36      37      38
      39      40      41      33      34      35      36      37      38      39
      34      35      36      37      38      39      35      36      37      36
      37      37      38      39      40      41      42      43      44      39
      40      41      40      41      42      43      44      41      42      43
      44      42      43      44      43      44      44       0      46      47
      48      49      50      51      47      48      49      50      51      52
      53      48      49      50      51      49      50      51      50      51
      52      53      54      55      59      51      52      53      52      53
      54      55      56      57      58      59      60      61      53      54
      55      59      54      55      56      57      58      59      60      61
      62      63      55      56      57      58      59      60      61      56
      57      58      59      60      61      57      58      59      58      59
      59      60      61      62      63      64      65      66      61      62
      63      62      63      64      65      66      63      64      65      66
      64      65      66      65      66      66       0
%FLAG HBOND_ACOEF                                                               
%FORMAT(5E16.8)                                                                 

%FLAG HBOND_BCOEF                                                               
%FORMAT(5E16.8)                                                                 

%FLAG HBCUT                                                                     
%FORMAT(5E16.8)                                                                 

%FLAG AMBER_ATOM_TYPE                                                           
%FORMAT(20a4)                                                                   
HC  CT  HC  HC  C   O   N   H   CX  H1  CT  H1  H1  S   C   O   N   H   CT  H1  
H1  H1  HC  CT  HC  HC  C   O   N   H   CX  H1  CT  H1  H1  S   C   O   N   H   
CT  H1  H1  H1  HC  CT  HC  HC  C   O   N   H   CX  H1  CT  HC  HC  HC  C   O   
N   H   CT  H1  H1  H1  
%FLAG TREE_CHAIN_CLASSIFICATION                                                 
%FORMAT(20a4)                                                                   
BLA BLA BLA BLA BLA BLA M   E   M   E   3   E   E   E   M   E   BLA BLA BLA BLA 
BLA BLA BLA BLA BLA BLA BLA BLA M   E   M   E   3   E   E   E   M   E   BLA BLA 
BLA BLA BLA BLA BLA BLA BLA BLA BLA BLA M   E   M   E   3   E   E   E   M   E   
BLA BLA BLA BLA BLA BLA 
%FLAG JOIN_ARRAY                                                                
%FORMAT(10I8)                                                                   
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0
%FLAG IROTAT                                                                    
%FORMAT(10I8)                                                                   
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0       0       0       0       0
       0       0       0       0       0       0
%FLAG RADIUS_SET                                                                
%FORMAT(1a80)                                                                   
modified Bondi radii (mbondi)                                                   
%FLAG RADII                                                                     
%FORMAT(5E16.8)                                                                 
  1.30000000E+00  1.70000000E+00  1.30000000E+00  1.30000000E+00  1.70000000E+00
  1.50000000E+00  1.55000000E+00  1.30000000E+00  1.70000000E+00  1.30000000E+00
  1.70000000E+00  1.30000000E+00  1.30000000E+00  1.80000000E+00  1.70000000E+00
  1.50000000E+00  1.55000000E+00  1.30000000E+00  1.70000000E+00  1.30000000E+00
  1.30000000E+00  1.30000000E+00  1.30000000E+00  1.70000000E+00  1.30000000E+00
  1.30000000E+00  1.70000000E+00  1.50000000E+00  1.55000000E+00  1.30000000E+00
  1.70000000E+00  1.30000000E+00  1.70000000E+00  1.30000000E+00  1.30000000E+00
  1.80000000E+00  1.70000000E+00  1.50000000E+00  1.55000000E+00  1.30000000E+00
  1.70000000E+00  1.30000000E+00  1.30000000E+00  1.30000000E+00  1.30000000E+00
  1.70000000E+00  1.30000000E+00  1.30000000E+00  1.70000000E+00  1.50000000E+00
  1.55000000E+00  1.30000000E+00  1.70000000E+00  1.30000000E+00  1.70000000E+00
  1.30000000E+00  1.30000000E+00  1.30000000E+00  1.70000000E+00  1.50000000E+00
  1.55000000E+00  1.30000000E+00  1.70000000E+00  1.30000000E+00  1.30000000E+00
  1.30000000E+00
%FLAG SCREEN                                                                    
%FORMAT(5E16.8)                                                                 
  8.50000000E-01  7.20000000E-01  8.50000000E-01  8.50000000E-01  7.20000000E-01
  8.50000000E-01  7.90000000E-01  8.50000000E-01  7.20000000E-01  8.50000000E-01
  7.20000000E-01  8.50000000E-01  8.50000000E-01  9.60000000E-01  7.20000000E-01
  8.50000000E-01  7.90000000E-01  8.50000000E-01  7.20000000E-01  8.50000000E-01
  8.50000000E-01  8.50000000E-01  8.50000000E-01  7.20000000E-01  8.50000000E-01
  8.50000000E-01  7.20000000E-01  8.50000000E-01  7.90000000E-01  8.50000000E-01
  7.20000000E-01  8.50000000E-01  7.20000000E-01  8.50000000E-01  8.50000000E-01
  9.60000000E-01  7.20000000E-01  8.50000000E-01  7.90000000E-01  8.50000000E-01
  7.20000000E-01  8.50000000E-01  8.50000000E-01  8.50000000E-01  8.50000000E-01
  7.20000000E-01  8.50000000E-01  8.50000000E-01  7.20000000E-01  8.50000000E-01
  7.90000000E-01  8.50000000E-01  7.20000000E-01  8.50000000E-01  7.20000000E-01
  8.50000000E-01  8.50000000E-01  8.50000000E-01  7.20000000E-01  8.50000000E-01
  7.90000000E-01  8.50000000E-01  7.20000000E-01  8.50000000E-01  8.50000000E-01
  8.50000000E-01