File: make_bin.sh

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cufflinks 1.3.0-2
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#!/bin/bash

#simple script to pack up a precompiled binary package, with the boost thread
# library statically linked in.

echo "packing up $1.tar.gz, using boost in $2, linking against $3 and using BAM in $4"
mkdir $1
make clean
./configure --enable-intel64 --with-boost=$2 --with-boost-thread=$3 --with-bam=$4
make
cp src/cufflinks $1
cp src/cuffcompare $1
cp src/cuffdiff $1
cp src/cuffmerge $1/cuffmerge
cp src/gffread $1
cp src/gtf_to_sam $1
cp README $1
cp LICENSE $1
cp AUTHORS $1

tar cvfz $1.tar.gz $1