1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
|
Contact: Cole Trapnell <cole@cs.umd.edu>
Homepage: http://cufflinks.cbcb.umd.edu/
Name: Cufflinks
Reference:
- Author: Cole Trapnell and Brian A Williams and Geo Pertea and Ali Mortazavi and Gordon Kwan and Marijke J van Baren and Steven L Salzberg and Barbara J Wold and Lior Pachter
Title: Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Journal: Nature Biotechnology
DOI: doi:10.1038/nbt.1621
URL: http://www.nature.com/nbt/journal/v28/n5/full/nbt.1621.html
Year: 2010
PMID: 20436464
Pages: 511-515
Volume: 28
Number: 5
Type: article
- Author: "Cole Trapnell and Adam Roberts and Loyal Goff and Geo Pertea and Daehwan Kim and David R Kelley and Harold Pimentel and Steven L Salzberg and John L Rinn and Lior Pachter"
Title: Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks.
Journal: Nat. Protocols
Year: 2012
DOI: 10.1038/nprot.2012.016
URL: http://www.nature.com/nprot/journal/v7/n3/full/nprot.2012.016.html
Pages: 562-578
Volume: 7
Number: 8
PMID: 22383036
Type: article
|
