1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51
|
#!/usr/bin/env cwl-runner
cwlVersion: v1.0
$graph:
- id: echo
class: CommandLineTool
hints:
ResourceRequirement:
ramMin: 8
inputs:
echo_in1:
type: string
inputBinding: {}
echo_in2:
type: string
inputBinding: {}
outputs:
echo_out:
type: string
outputBinding:
glob: "step1_out"
loadContents: true
outputEval: $(self[0].contents)
baseCommand: "echo"
arguments: ["-n", "foo"]
stdout: step1_out
- id: main
class: Workflow
inputs:
inp1: string[]
inp2: string[]
requirements:
- class: ScatterFeatureRequirement
steps:
step1:
scatter: [echo_in1, echo_in2]
scatterMethod: flat_crossproduct
in:
echo_in1: inp1
echo_in2: inp2
out: [echo_out]
run: "#echo"
outputs:
out:
outputSource: step1/echo_out
type:
type: array
items: string
|