File: cythonarray.pyx

package info (click to toggle)
cython 0.25.2-1
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 12,768 kB
  • sloc: python: 61,303; ansic: 11,484; cpp: 1,105; xml: 1,031; makefile: 397; lisp: 206; sed: 11; sh: 7
file content (196 lines) | stat: -rw-r--r-- 4,808 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
# mode: run

from __future__ import unicode_literals

from cython.view cimport array
from cython cimport view as v
cimport cython as cy

include "cythonarrayutil.pxi"


def contiguity():
    '''
    >>> contiguity()
    12 4
    2 3
    2
    <BLANKLINE>
    4 8
    2 3
    2
    '''
    cdef v.array cvarray = v.array(shape=(2,3), itemsize=sizeof(int), format="i", mode='c')
    assert cvarray.len == 2*3*sizeof(int), (cvarray.len, 2*3*sizeof(int))
    assert cvarray.itemsize == sizeof(int)
    print cvarray.strides[0], cvarray.strides[1]
    print cvarray.shape[0], cvarray.shape[1]
    print cvarray.ndim

    print

    cdef v.array farray = v.array(shape=(2,3), itemsize=sizeof(int), format="i", mode='fortran')
    assert farray.len == 2*3*sizeof(int)
    assert farray.itemsize == sizeof(int)
    print farray.strides[0], farray.strides[1]
    print farray.shape[0], farray.shape[1]
    print farray.ndim

def acquire():
    '''
    >>> acquire()
    '''
    cdef object[int, ndim=1, mode="c"] buf1d = \
            array(shape=(10,), itemsize=sizeof(int), format='i', mode='c')
    cdef object[int, ndim=2, mode="c"] buf2d = \
            array(shape=(10,10), itemsize=sizeof(int), format='i')
    cdef object[unsigned long, ndim=3, mode='fortran'] buf3d = \
            array(shape=(1,2,3), itemsize=sizeof(unsigned long), format='L', mode='fortran')
    cdef object[long double, ndim=3, mode='fortran'] bufld = \
            array(shape=(1,2,3), itemsize=sizeof(long double), format='g', mode='fortran')

def full_or_strided():
    '''
    >>> full_or_strided()
    '''
    cdef object[float, ndim=2, mode='full'] fullbuf = \
            array(shape=(10,10), itemsize=sizeof(float), format='f', mode='c')
    cdef object[long long int, ndim=3, mode='strided'] stridedbuf = \
            array(shape=(1,2,3), itemsize=sizeof(long long int), format='q', mode='fortran')

def dont_allocate_buffer():
    """
    >>> dont_allocate_buffer()
    callback called
    """
    cdef array result = array((10, 10), itemsize=sizeof(int), format='i', allocate_buffer=False)
    assert result.data == NULL
    result.callback_free_data = callback
    result = None

def test_cython_array_getbuffer():
    """
    >>> test_cython_array_getbuffer()
    98
    61
    98
    61
    """
    cdef int[:, ::1] cslice = create_array((14, 10), 'c')
    cdef int[::1, :] fslice = create_array((14, 10), 'fortran')

    print cslice[9, 8]
    print cslice[6, 1]

    print fslice[9, 8]
    print fslice[6, 1]

def test_cython_array_index():
    """
    >>> test_cython_array_index()
    98
    61
    98
    61
    """
    c_array = create_array((14, 10), 'c')
    f_array = create_array((14, 10), 'fortran')

    print c_array[9, 8]
    print c_array[6, 1]

    print f_array[9, 8]
    print f_array[6, 1]

cdef int *getp(int dim1=10, int dim2=10, dim3=1) except NULL:
    print "getp()"

    cdef int *p = <int *> malloc(dim1 * dim2 * dim3 * sizeof(int))

    if p == NULL:
        raise MemoryError

    for i in range(dim1 * dim2 * dim3):
        p[i] = i

    return p

cdef void callback_free_data(void *p):
    print 'callback free data called'
    free(p)

def test_array_from_pointer():
    """
    >>> test_array_from_pointer()
    getp()
    69
    c
    getp()
    callback free data called
    fortran
    getp()
    56
    getp()
    56
    getp()
    119
    callback free data called
    """
    cdef int *p = getp()
    cdef array c_arr = <int[:10, :10]> p
    c_arr.callback_free_data = callback_free_data
    print c_arr[6, 9]
    print c_arr.mode

    c_arr = (<int[:10:1, :10]> getp())
    print c_arr.mode
    c_arr.callback_free_data = free

    c_arr =  <int[:10, :10]> getp()
    c_arr.callback_free_data = free
    cdef int[:, ::1] mslice = c_arr
    print mslice[5, 6]

    c_arr = <int[:12, :10]> getp(12, 10)
    c_arr.callback_free_data = free
    print c_arr[5, 6]

    cdef int m = 12
    cdef int n = 10
    c_arr = <int[:m, :n]> getp(m, n)
    c_arr.callback_free_data = callback_free_data
    print c_arr[m - 1, n - 1]

def test_array_from_pointer_3d():
    """
    >>> test_array_from_pointer_3d()
    getp()
    3 3
    True True
    """
    cdef int *p = getp(2, 2, 2)
    cdef array c_arr = <int[:2, :2, :2:1]> p
    cdef array f_arr = <int[:2:1, :2, :2]> p

    cdef int[:, :, ::1] m1 = c_arr
    cdef int[::1, :, :] m2 = f_arr

    print m1[0, 1, 1], m2[1, 1, 0]
    print m1.is_c_contig(), m2.is_f_contig()

def test_cyarray_from_carray():
    """
    >>> test_cyarray_from_carray()
    0 8 21
    0 8 21
    """
    cdef int[7][8] a
    for i in range(7):
        for j in range(8):
            a[i][j] = i * 8 + j

    cdef int[:, :] mslice = <int[:, :]> a
    print mslice[0, 0], mslice[1, 0], mslice[2, 5]

    mslice = a
    print mslice[0, 0], mslice[1, 0], mslice[2, 5]