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#!/usr/bin/make -f
export DH_VERBOSE = 1
include /usr/share/dpkg/default.mk
export LC_ALL=C.UTF-8
export PYBUILD_NAME=cyvcf2
PYBUILD_BEFORE_TEST=cp -a $(PYBUILD_NAME)/tests {build_dir}/$(PYBUILD_NAME);
export DEB_BUILD_MAINT_OPTIONS=hardening=+all
export CYTHONIZE=1
export CYVCF2_HTSLIB_MODE=EXTERNAL
%:
dh $@ --buildsystem=pybuild
override_dh_install:
dh_numpy3
dh_install
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
echo "$(PYBUILD_BEFORE_TEST) seems to be ignored - copying tests dir manually"
for tdir in .pybuild/cpython3_* ; do \
cp -a $(PYBUILD_NAME)/tests $${tdir}/build/$(PYBUILD_NAME) ; \
done
dh_auto_test
# clean up after testing
find . -name out.vcf -delete
endif
ifeq (,$(filter nodoc,$(DEB_BUILD_OPTIONS) $(DEB_BUILD_PROFILES)))
override_dh_installman:
PATH=$$PATH:$(CURDIR)/debian/python3-cyvcf2/usr/bin \
PYTHONPATH=$(CURDIR)/debian/python3-cyvcf2/usr/lib/$(shell py3versions -d)/dist-packages/ \
help2man --no-info \
--name="fast parsing of VCF and BCF including region-queries" \
--version-string=$(DEB_VERSION_UPSTREAM) cyvcf2 > debian/cyvcf2.1
dh_installman
endif
# If you need to rebuild the Sphinx documentation
# Add spinxdoc to the dh --with line
#override_dh_auto_build:
# dh_auto_build
# PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -bhtml docs/ build/html # HTML generator
# PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -bman docs/ build/man # Manpage generator
override_dh_clean:
dh_clean
rm -rf cyvcf2.egg-info cyvcf2/cyvcf2.c __o.vcf
find . -name "*.so" -delete
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