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Source: dascrubber
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13)
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/dascrubber
Vcs-Git: https://salsa.debian.org/med-team/dascrubber.git
Homepage: https://dazzlerblog.wordpress.com/
Rules-Requires-Root: no
Package: dascrubber
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends}
Suggests: daligner,
dazzdb
Description: alignment-based scrubbing pipeline for DNA sequencing reads
The Dazzler Scrubbing Suite produces a set of edited reads that are guaranteed
to
* be continuous stretches of the underlying genome (i.e. no unremoved
adapters and not chimers)
* have no very low quality stretches (i.e. the error rate never exceeds some
reasonable maximum, 20% or so in the case of Pacbio data).
Its secondary goal is to do so with the minimum removal of data and splitting
of reads.
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