File: create_sibling_webdav.py

package info (click to toggle)
datalad-next 1.5.0-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 2,584 kB
  • sloc: python: 23,970; makefile: 205; sh: 61
file content (663 lines) | stat: -rw-r--r-- 26,365 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
# emacs: -*- mode: python; py-indent-offset: 4; tab-width: 4; indent-tabs-mode: nil -*-
# ex: set sts=4 ts=4 sw=4 et:
# ## ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##
#
#   See COPYING file distributed along with the datalad package for the
#   copyright and license terms.
#
# ## ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##
"""High-level interface for creating a combi-target on a WebDAV capable server
 """
import logging
from urllib.parse import (
    quote as urlquote,
    urlunparse,
)

from datalad_next.commands import (
    EnsureCommandParameterization,
    ValidatedInterface,
    Parameter,
    build_doc,
    datasetmethod,
    eval_results,
    generic_result_renderer,
    get_status_dict,
)
from datalad.interface.common_opts import (
    recursion_flag,
    recursion_limit
)
from datalad_next.constraints import (
    ConstraintError,
    DatasetParameter,
    EnsureBool,
    EnsureChoice,
    EnsureDataset,
    EnsureInt,
    EnsureParsedURL,
    EnsureRange,
    EnsureRemoteName,
    EnsureStr,
    ParameterConstraintContext,
)
from datalad_next.utils import CredentialManager
from datalad_next.utils import (
    get_specialremote_credential_properties,
    patched_env,
    update_specialremote_credential,
    _yield_ds_w_matching_siblings,
)


__docformat__ = "restructuredtext"

lgr = logging.getLogger('datalad.distributed.create_sibling_webdav')


class CreateSiblingWebDAVParamValidator(EnsureCommandParameterization):
    def __init__(self):
        super().__init__(
            param_constraints=dict(
                url=EnsureParsedURL(
                    required=['scheme', 'netloc'],
                    forbidden=['query', 'fragment'],
                    match='^(http|https)://',
                ),
                dataset=EnsureDataset(
                    installed=True, purpose='create WebDAV sibling(s)'),
                name=EnsureRemoteName(),
                storage_name=EnsureRemoteName(),
                mode=EnsureChoice(
                    'annex', 'filetree', 'annex-only', 'filetree-only',
                    'git-only',
                ),
                # TODO https://github.com/datalad/datalad-next/issues/131
                credential=EnsureStr(),
                existing=EnsureChoice('skip', 'error', 'reconfigure'),
                recursive=EnsureBool(),
                recursion_limit=EnsureInt() & EnsureRange(min=0),
            ),
            validate_defaults=('dataset',),
            joint_constraints={
                ParameterConstraintContext(('url',), 'url'):
                self._validate_param_url,
                ParameterConstraintContext(
                    ('url', 'name'), 'default name'):
                self._validate_default_name,
                ParameterConstraintContext(
                    ('mode', 'name', 'storage_name'), 'default storage name'):
                self._validate_default_storage_name,
                ParameterConstraintContext(
                    ('mode', 'name', 'storage_name'), 'default storage name'):
                self._validate_default_storage_name,
                ParameterConstraintContext(
                    ('existing', 'recursive', 'name', 'storage_name',
                     'dataset', 'mode')):
                self._validate_existing_names,
            },
        )

    def _validate_param_url(self, url):
        if url.scheme == "http":
            lgr.warning(
                f"Using 'http:' ({url.geturl()!r}) means that WebDAV "
                "credentials are sent unencrypted over network links. "
                "Consider using 'https:'.")

    def _validate_default_name(self, url, name):
        if not name:
            # not using .netloc to avoid ports to show up in the name
            return {'name': url.hostname}

    def _validate_default_storage_name(self, mode, name, storage_name):
        if mode in ('annex-only', 'filetree-only') and storage_name:
            lgr.warning(
                "Sibling name will be used for storage sibling in "
                "storage-sibling-only mode, but a storage sibling name "
                "was provided"
            )
        if mode == 'git-only' and storage_name:
            lgr.warning(
                "Storage sibling setup disabled, but a storage sibling name "
                "was provided"
            )
        if mode != 'git-only' and not storage_name:
            storage_name = f"{name}-storage"

        if mode != 'git-only' and name == storage_name:
            # leads to unresolvable, circular dependency with publish-depends
            self.raise_for(
                dict(mode=mode, name=name, storage_name=storage_name),
                "sibling names must not be equal",
            )
        return dict(mode=mode, name=name, storage_name=storage_name)

    def _validate_existing_names(
            self, existing, recursive, name, storage_name, dataset,
            mode):
        if recursive:
            # we don't do additional validation for recursive processing,
            # this has to be done when things are running, because an
            # upfront validation would require an expensive traversal
            return

        if existing != 'error':
            # nothing to check here
            return

        if not isinstance(dataset, DatasetParameter):
            # we did not get a proper dataset parameter,
            # hence cannot tailor to a dataset to check a remote
            # name against
            return

        validator = EnsureRemoteName(known=False, dsarg=dataset)
        try:
            if mode != 'annex-only':
                validator(name)
            if mode != 'git-only':
                validator(storage_name)
        except ConstraintError as e:
            self.raise_for(
                dict(existing=existing,
                     recursive=recursive,
                     name=name,
                     storage_name=storage_name,
                     dataset=dataset,
                     mode=mode),
                e.msg,
            )
        return


@build_doc
class CreateSiblingWebDAV(ValidatedInterface):
    """Create a sibling(-tandem) on a WebDAV server

    WebDAV is a standard HTTP protocol extension for placing files on a server
    that is supported by a number of commercial storage services (e.g.
    4shared.com, box.com), but also instances of cloud-storage solutions like
    Nextcloud or ownCloud. These software packages are also the basis for
    some institutional or public cloud storage solutions, such as EUDAT B2DROP.

    For basic usage, only the URL with the desired dataset location on a WebDAV
    server needs to be specified for creating a sibling. However, the sibling
    setup can be flexibly customized (no storage sibling, or only a storage
    sibling, multi-version storage, or human-browsable single-version storage).

    This command does not check for conflicting content on the WebDAV
    server!

    When creating siblings recursively for a dataset hierarchy, subdataset
    exports are placed at their corresponding relative paths underneath the
    root location on the WebDAV server.


    Collaboration on WebDAV siblings

    The primary use case for WebDAV siblings is dataset deposition, where
    only one site is uploading dataset and file content updates.
    For collaborative workflows with multiple contributors, please make sure
    to consult the documentation on the underlying ``datalad-annex::``
    Git remote helper for advice on appropriate setups:
    http://docs.datalad.org/projects/next/


    Git-annex implementation details

    Storage siblings are presently configured to NOT be enabled
    automatically on cloning a dataset. Due to a limitation of git-annex, this
    would initially fail (missing credentials). Instead, an explicit
    ``datalad siblings enable --name <storage-sibling-name>`` command must be
    executed after cloning. If necessary, it will prompt for credentials.

    This command does not (and likely will not) support embedding credentials
    in the repository (see ``embedcreds`` option of the git-annex ``webdav``
    special remote; https://git-annex.branchable.com/special_remotes/webdav),
    because such credential copies would need to be updated, whenever they
    change or expire. Instead, credentials are retrieved from DataLad's
    credential system. In many cases, credentials are determined automatically,
    based on the HTTP authentication realm identified by a WebDAV server.

    This command does not support setting up encrypted remotes (yet). Neither
    for the storage sibling, nor for the regular Git-remote. However, adding
    support for it is primarily a matter of extending the API of this command,
    and passing the respective options on to the underlying git-annex setup.

    This command does not support setting up chunking for webdav storage
    siblings (https://git-annex.branchable.com/chunking).
    """
    _examples_ = [
       dict(text="Create a WebDAV sibling tandem for storage of a dataset's "
                 "file content and revision history. A user will be prompted "
                 "for any required credentials, if they are not yet known.",
             code_py="create_sibling_webdav(url='https://webdav.example.com/myds')",
             code_cmd='datalad create-sibling-webdav "https://webdav.example.com/myds"'),
       dict(text="Such a dataset can be cloned by DataLad via a specially "
                 "crafted URL. Again, credentials are automatically "
                 "determined, or a user is prompted to enter them",
            code_py="clone('datalad-annex::?type=webdav&encryption=none&url=https://webdav.example.com/myds')",
            code_cmd='datalad clone "datalad-annex::?type=webdav&encryption=none&url=https://webdav.example.com/myds"'),
       dict(
           text="A sibling can also be created with a human-readable file "
                 "tree, suitable for data exchange with non-DataLad users, "
                 "but only able to host a single version of each file",
           code_py="create_sibling_webdav(url='https://example.com/browseable', mode='filetree')",
           code_cmd='datalad create-sibling-webdav --mode filetree "https://example.com/browsable"'),
       dict(text="Cloning such dataset siblings is possible via a convenience "
                 "URL",
            code_py="clone('webdavs://example.com/browseable')",
            code_cmd='datalad clone "webdavs://example.com/browsable"'),
       dict(text="In all cases, the storage sibling needs to explicitly "
                 "enabled prior to file content retrieval",
            code_py="siblings('enable', name='example.com-storage')",
            code_cmd='datalad siblings enable --name example.com-storage'),
    ]

    _params_ = dict(
        url=Parameter(
            args=("url",),
            metavar='URL',
            doc="URL identifying the sibling root on the target WebDAV server"),
        dataset=Parameter(
            args=("-d", "--dataset"),
            doc="""specify the dataset to process.  If
            no dataset is given, an attempt is made to identify the dataset
            based on the current working directory"""),
        name=Parameter(
            args=('-s', '--name',),
            metavar='NAME',
            doc="""name of the sibling. If none is given, the hostname-part
            of the WebDAV URL will be used.
            With `recursive`, the same name will be used to label all
            the subdatasets' siblings."""),
        storage_name=Parameter(
            args=("--storage-name",),
            metavar="NAME",
            doc="""name of the storage sibling (git-annex special remote).
            Must not be identical to the sibling name. If not specified,
            defaults to the sibling name plus '-storage' suffix. If only
            a storage sibling is created, this setting is ignored, and
            the primary sibling name is used."""),
        credential=Parameter(
            args=("--credential",),
            metavar='NAME',
            doc="""name of the credential providing a user/password credential
            to be used for authorization. The credential can be supplied via
            configuration setting 'datalad.credential.<name>.user|secret', or
            environment variable DATALAD_CREDENTIAL_<NAME>_USER|SECRET, or will
            be queried from the active credential store using the provided
            name. If none is provided, the last-used credential for the
            authentication realm associated with the WebDAV URL will be used.
            Only if a credential name was given, it will be encoded in the
            URL of the created WebDAV Git remote, credential auto-discovery
            will be performed on each remote access.""",
        ),
        existing=Parameter(
            args=("--existing",),
            doc="""action to perform, if a (storage) sibling is already
            configured under the given name.
            In this case, sibling creation can be skipped ('skip') or the
            sibling (re-)configured ('reconfigure') in the dataset, or the
            command be instructed to fail ('error').""", ),
        recursive=recursion_flag,
        recursion_limit=recursion_limit,
        mode=Parameter(
            args=("--mode",),
            doc="""Siblings can be created in various modes:
            full-featured sibling tandem, one for a dataset's Git history
            and one storage sibling to host any number of file versions
            ('annex').
            A single sibling for the Git history only ('git-only').
            A single annex sibling for multi-version file storage only
            ('annex-only').
            As an alternative to the standard (annex) storage sibling setup
            that is capable of storing any number of historical file versions
            using a content hash layout ('annex'|'annex-only'), the 'filetree'
            mode can used.
            This mode offers a human-readable data organization on the WebDAV
            remote that matches the file tree of a dataset (branch).
            However, it can, consequently, only store a single version of each
            file in the file tree.
            This mode is useful for depositing a single dataset
            snapshot for consumption without DataLad. The 'filetree' mode
            nevertheless allows for cloning such a single-version dataset,
            because the full dataset history can still be pushed to the WebDAV
            server.
            Git history hosting can also be turned off for this setup
            ('filetree-only').
            When both a storage sibling and a regular sibling are created
            together, a publication dependency on the storage sibling is
            configured for the regular sibling in the local dataset clone.
            """),
    )

    _validator_ = CreateSiblingWebDAVParamValidator()

    @staticmethod
    @datasetmethod(name='create_sibling_webdav')
    @eval_results
    def __call__(
            url,
            *,
            dataset=None,
            name=None,
            storage_name=None,
            mode='annex',
            credential=None,
            existing='error',
            recursive=False,
            recursion_limit=None):

        ds = dataset.ds

        res_kwargs = dict(
            action='create_sibling_webdav',
            logger=lgr,
            refds=ds.path,
        )

        # Query existing siblings upfront in order to fail early on
        # existing=='error', since misconfiguration (particularly of special
        # remotes) only to fail in a subdataset later on with that config, can
        # be quite painful.
        if existing == 'error':
            # even if we have to fail, let's report all conflicting siblings
            # in subdatasets, an outside controller can stop the generator
            # if desired
            failed = False
            for dpath, sname in _yield_ds_w_matching_siblings(
                    ds,
                    (name, storage_name),
                    recursive=recursive,
                    recursion_limit=recursion_limit):
                res = get_status_dict(
                    status='error',
                    message=(
                        "a sibling %r is already configured in dataset %r",
                        sname, dpath),
                    type='sibling',
                    name=sname,
                    ds=ds,
                    **res_kwargs,
                )
                failed = True
                yield res
            if failed:
                return

        # determine the credential upfront
        # can be done once at the start, all siblings will live on the same
        # server
        # if all goes well, we'll store a credential (update) at the very end
        credman = CredentialManager(ds.config)
        credname, credprops = credman.obtain(
            credential,
            prompt='User name and password are required for WebDAV access '
                   f'at {url.geturl()}',
            query_props=get_specialremote_credential_properties(
                dict(type='webdav', url=url.geturl())),
            type_hint='user_password',
            # make it raise ValueError when the critical components are missing
            expected_props=['user', 'secret'],
        )
        cred_user = credprops['user']
        cred_password = credprops['secret']

        def _dummy(ds, refds, **kwargs):
            """Small helper to prepare the actual call to _create_sibling_webdav()
            for a particular (sub)dataset.

            We only have kwargs to catch whatever it throws at us.
            """
            relpath = ds.pathobj.relative_to(refds.pathobj) if not ds == refds else None
            if relpath:
                dsurl = f"{urlunparse(url)}/{relpath}"
            else:
                dsurl = url.geturl()

            return _create_sibling_webdav(
                ds,
                dsurl,
                # we pass the given, not the discovered, credential name!
                # given a name means "take this particular one", not giving a
                # name means "take what is best". Only if we pass this
                # information on, we achieve maintaining this behavior
                credential_name=credential,
                credential=(cred_user, cred_password),
                mode=mode,
                name=name,
                storage_name=storage_name,
                existing=existing,
            )

        # Generate a sibling for dataset "ds", and for sub-datasets if recursive
        # is True.
        for res in ds.foreach_dataset(
                _dummy,
                return_type='generator',
                result_renderer='disabled',
                recursive=recursive,
                # recursive False is not enough to disable recursion
                # https://github.com/datalad/datalad/issues/6659
                recursion_limit=0 if not recursive else recursion_limit,
        ):
            # unwind result generator
            for partial_result in res.get('result', []):
                yield dict(res_kwargs, **partial_result)

        # this went well, update the credential
        update_specialremote_credential(
            'webdav',
            credman,
            credname,
            credprops,
            credtype_hint='user_password',
            duplicate_hint=
            'Specify a credential name via the `credential` parameter '
            ' and/or configure a credential with the datalad-credentials '
            'command{}'.format(
                f' with a `realm={credprops["realm"]}` property'
                if 'realm' in credprops else ''),
        )

    @staticmethod
    def custom_result_renderer(res, **kwargs):
        from datalad_next.uis import (
            ansi_colors as ac,
            ui_switcher as ui,
        )
        from os.path import relpath

        if res['status'] != 'ok' or 'sibling_webdav' not in res['action'] or \
                res['type'] != 'sibling':
            # It's either 'notneeded' (not rendered), an `error`/`impossible` or
            # something unspecific to this command. No special rendering
            # needed.
            generic_result_renderer(res)
            return

        ui.message('{action}({status}): {path} [{name}{url}]'.format(
            action=ac.color_word(res['action'], ac.BOLD),
            path=relpath(res['path'], res['refds'])
            if 'refds' in res else res['path'],
            name=ac.color_word(res.get('name', ''), ac.MAGENTA),
            url=f": {res['url']}" if 'url' in res else '',
            status=ac.color_status(res['status']),
        ))


def _create_sibling_webdav(
        ds, url, *,
        credential_name, credential,
        mode='git-only', name=None, storage_name=None, existing='error'):
    """
    Parameters
    ----------
    ds: Dataset
    url: str
    credential_name: str
    credential: tuple
    mode: str, optional
    name: str, optional
    storage_name: str, optional
    existing: str, optional
    """
    # simplify downstream logic, export yes or no
    export_storage = 'filetree' in mode

    existing_siblings = [
        r[1] for r in _yield_ds_w_matching_siblings(
            ds,
            (name, storage_name),
            recursive=False)
    ]

    if mode != 'git-only':
        yield from _create_storage_sibling(
            ds,
            url,
            storage_name,
            credential,
            export=export_storage,
            existing=existing,
            known=storage_name in existing_siblings,
        )

    if mode not in ('annex-only', 'filetree-only'):
        yield from _create_git_sibling(
            ds,
            url,
            name,
            credential_name,
            credential,
            export=export_storage,
            existing=existing,
            known=name in existing_siblings,
            publish_depends=storage_name if mode != 'git-only'
            else None
        )


def _get_skip_sibling_result(name, ds, type_):
    return get_status_dict(
        action='create_sibling_webdav{}'.format(
            '.storage' if type_ == 'storage' else ''),
        ds=ds,
        status='notneeded',
        message=("skipped creating %r sibling %r, already exists",
                 type_, name),
        name=name,
        type='sibling',
    )


def _create_git_sibling(
        ds, url, name, credential_name, credential, export, existing,
        known, publish_depends=None):
    """
    Parameters
    ----------
    ds: Dataset
    url: str
    name: str
    credential_name: str
    credential: tuple
    export: bool
    existing: {skip, error, reconfigure}
    known: bool
        Flag whether the sibling is a known remote (no implied
        necessary existence of content on the remote).
    publish_depends: str or None
        publication dependency to set
    """
    if known and existing == 'skip':
        yield _get_skip_sibling_result(name, ds, 'git')
        return

    remote_url = \
        "datalad-annex::?type=webdav&encryption=none" \
        "&exporttree={export}&url={url}".format(
            export='yes' if export else 'no',
            # urlquote, because it goes into the query part of another URL
            url=urlquote(url))
    if credential_name:
        # we need to quote the credential name too.
        # e.g., it is not uncommon for credentials to be named after URLs
        remote_url += f'&dlacredential={urlquote(credential_name)}'

    # announce the sibling to not have an annex (we have a dedicated
    # storage sibling for that) to avoid needless annex-related processing
    # and speculative whining by `siblings()`
    ds.config.set(f'remote.{name}.annex-ignore', 'true', scope='local')

    for r in ds.siblings(
            # action must always be 'configure' (not 'add'), because above we just
            # made a remote {name} known, which is detected by `sibling()`. Any
            # conflict detection must have taken place separately before this call
            # https://github.com/datalad/datalad/issues/6649
            action="configure",
            name=name,
            url=remote_url,
            # this is presently the default, but it may change
            fetch=False,
            publish_depends=publish_depends,
            return_type='generator',
            result_renderer='disabled'):
        if r.get('action') == 'configure-sibling':
            r['action'] = 'reconfigure_sibling_webdav' \
                if known and existing == 'reconfigure' \
                else 'create_sibling_webdav'
        yield r


def _create_storage_sibling(
        ds, url, name, credential, export, existing, known=False):
    """
    Parameters
    ----------
    ds: Dataset
    url: str
    name: str
    credential: tuple
    export: bool
    existing: {skip, error, reconfigure}
        (Presently unused)
    known: bool
        Flag whether the sibling is a known remote (no implied
        necessary existence of content on the remote).
    """
    if known and existing == 'skip':
        yield _get_skip_sibling_result(name, ds, 'storage')
        return

    cmd_args = [
        'enableremote' if known and existing == 'reconfigure'
        else 'initremote',
        name,
        "type=webdav",
        f"url={url}",
        f"exporttree={'yes' if export else 'no'}",
        "encryption=none",
        # for now, no autoenable. It would result in unconditional
        # error messages on clone
        #https://github.com/datalad/datalad/issues/6634
        #"autoenable=true"
    ]
    # Add a git-annex webdav special remote. This requires to set
    # the webdav environment variables accordingly.
    with patched_env(WEBDAV_USERNAME=credential[0],
                     WEBDAV_PASSWORD=credential[1],
    ):
        ds.repo.call_annex(cmd_args)
    yield get_status_dict(
        ds=ds,
        status='ok',
        action='reconfigure_sibling_webdav.storage'
               if known and existing == 'reconfigure' else
        'create_sibling_webdav.storage',
        name=name,
        type='sibling',
        url=url,
    )