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DEST_DIR = ~/bin
CFLAGS += -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing
LDLIBS = -lm -lz
ALL = fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp \
simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE
all: $(ALL)
fasta2DB: fasta2DB.c DB.c DB.h QV.c QV.h
DB2fasta: DB2fasta.c DB.c DB.h QV.c QV.h
quiva2DB: CPPFLAGS += -DINTERACTIVE
quiva2DB: quiva2DB.c DB.c DB.h QV.c QV.h
DB2quiva: DB2quiva.c DB.c DB.h QV.c QV.h
DB2arrow: DB2arrow.c DB.c QV.c DB.h QV.h
arrow2DB: arrow2DB.c DB.c QV.c DB.h QV.h
DBsplit: DBsplit.c DB.c DB.h QV.c QV.h
DBtrim: DBtrim.c DB.c DB.h QV.c QV.h
DBdust: DBdust.c DB.c DB.h QV.c QV.h
Catrack: Catrack.c DB.c DB.h QV.c QV.h
DBshow: DBshow.c DB.c DB.h QV.c QV.h
DB2ONE: DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h
DBstats: DBstats.c DB.c DB.h QV.c QV.h
DBrm: DBrm.c DB.c DB.h QV.c QV.h
DBmv: CPPFLAGS += -DMOVE
DBmv: DBmv.c DB.c DB.h QV.c QV.h
DBcp: DBmv.c DB.c DB.h QV.c QV.h
$(CC) $(CPPFLAGS) $(CFLAGS) $(LDFLAGS) -o $@ $^ $(LDLIBS)
simulator: simulator.c DB.c DB.h QV.c QV.h
rangen: LDLIBS =
rangen: rangen.c
fasta2DAM: fasta2DAM.c DB.c DB.h QV.c QV.h
DAM2fasta: DAM2fasta.c DB.c DB.h QV.c QV.h
DBwipe: DBwipe.c DB.c DB.h QV.c QV.h
clean:
rm -f $(ALL)
rm -fr *.dSYM
rm -f dazz.db.tar.gz
install:
install -d $(DESTDIR)/usr/bin
install $(ALL) $(DESTDIR)/usr/bin
package:
make clean
tar -zcf dazz.db.tar.gz README.md Makefile *.h *.c
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