File: mailtest.functions.in

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#!/bin/bash
# 
# Copyright (C) 2002 Laird Breyer
#  
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
# 
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
# 
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
# 
# Author:   Laird Breyer <laird@lbreyer.com>
#
# These functions are included by the test scripts. They could be
# just sourced, but then where to put the common functions in the filesystem? 

# begin mailtest.functions

prerequisite_command() {
    if [ -z "`type -p $1`" ]; then
	echo "Error: $1 not found. Please install $2 to proceed."
	exit 1
    fi
}

clean_working_tree() {
    if [ -e $MXDIR ]; then
	rm -rf $MXDIR
    else
	echo "Nothing to clean"
    fi
}

make_dummy_mbox() {
    cat > $MXDIR/mbox/dummy.mailbox <<EOF
From MAILER-DAEMON Thu Dec  4 13:50:55 2003
Date: 04 Dec 2003 13:50:55 +1000
From: Mail System Internal Data <MAILER-DAEMON@scooby>
Subject: DON\'T DELETE THIS MESSAGE -- FOLDER INTERNAL DATA
Message-ID: <1070509855@scooby>
X-IMAP: 1023007291 0000010227
Status: RO

This text is part of the internal format of your mail folder, and is not
a real message.  It is created automatically by the mail system software.
If deleted, important folder data will be lost, and it will be re-created
with the data reset to initial values.

EOF
}

prepare_working_tree() {
    if [ -d $MXDIR ]; then 
	echo "Error: Directory $MXDIR already exists. Remove it or use it.";
	usage;
    elif [ -n "$1" ]; then
	prerequisite_command "seq" "shellutils"
	NUM=`expr $1 - 1`;
	if [ $NUM -gt -1 ]; then
	    mkdir "$MXDIR" && \
	    mkdir "$MXDIR/tmp" && \
	    mkdir "$MXDIR/log" && \
	    mkdir "$MXDIR/plots" && \
	    mkdir "$MXDIR/mbox" && \
	    mkdir "$MXDIR/review" && \
	    mkdir "$MXDIR/filters" && \
	    for i in `seq 0 $NUM`; do mkdir "$MXDIR/$i"; done && \
	    echo "=== prepare_working_tree $*" >> $ALOG

	else
	    echo "Error: Please specify a number greater than zero."
	    usage
	fi

    else
	echo "Error: Please specify a number."
	usage
    fi
}

get_categories() {
    CATS=`find $MXDIR -type f -name '*.mbox' -exec basename {} \; | sort -u`
    [ -z "$CATS" ] && echo "No categories found"
}

get_filters() {
    FILTS=`find $FILTERS -type f -perm /0111 -exec basename {} \; | sort -u`
    [ -z "$FILTS" ] && echo "No filters found"
}

get_number_of_subsets() {
    NUM=`ls $MXDIR | grep '^[0-9]' | wc -l`
    if [ $(($NUM)) -le 0 ]; then
	echo "error: you need to prepare first."
	usage
    fi
}

review_misclassified() {
    SM=$1
    shift
    cat > "$SM" <<EOF
#!/bin/sh
cat > msg.tmp.\$POSITION.\$FILENO
M=\`head -1 msg.tmp.\$POSITION.\$FILENO | grep -e "\$EMAIL.*\$DATE"\`
if [ -n "\$M" ]; then
    mv msg.tmp.\$POSITION.\$FILENO $MXDIR/review/\$1.\$2.\$POSITION.\$FILENO
else
    rm msg.tmp.\$POSITION.\$FILENO
fi
EOF
    
    if [ -d "$MXDIR/review" ]; then
	rm -f "$MXDIR/review/*"
    else
	echo "Error: You need to prepare first."
	usage
    fi

    if [ -s "$CLOG" ]; then
	grep " $1 $2 " "$CLOG" | \
	    while read f; do
		BOX=`echo $f | cut -d' ' -f2`
		export POSITION=`echo $f | cut -d' ' -f1`
		export EMAIL=`echo $f | cut -d' ' -f4`
		export DATE=`echo $f | cut -d' ' -f5-`
		echo "$f"
		[ -e "$MXDIR/$POSITION/$BOX.mbox" ] || export POSITION=mbox
		cat "$MXDIR/$POSITION/$BOX.mbox" | formail -s /bin/sh "$SM" "$1" "$2"
	    done
    else
	echo "Error: There are no logs - run the classifier(s) first" 
    fi

    rm -f "$SM"
}

testsuite_list_wrappers() {
    if [ -d $BOOTSTRAP ] ; then
	echo -ne "The following classification wrappers are selectable:\n\n"
	for f in `ls $BOOTSTRAP` ; do
	    [ -x "$BOOTSTRAP/$f" ] && echo "$f - `$BOOTSTRAP/$f describe`"
	done
    else
	echo "Bootstrap directory $BOOTSTRAP does not exist."
    fi
}

testsuite_deselect_wrappers() {
    shift
    if [ -z "$*" ] ; then
	usage
    else
	for f in "$@" ; do 
	    if [ -e $FILTERS/$f ] ; then
		echo "deselecting $f"
		rm -f $FILTERS/$f
	    else
		echo "$f: no such filter."
	    fi
	done
    fi
}

testsuite_select_wrappers() {
    shift
    if [ -z "$*" ] ; then
	usage
    else
	for f in $* ; do
	    if [ -x $BOOTSTRAP/$f ] ; then
		$BOOTSTRAP/$f bootstrap $FILTERS
	    else
		echo "The wrapper $f cannot be selected, skipping."
	    fi
    done
    fi
}

summarize_log() {
    awk -v "num=$NUM" -v "cats=${CATS//.mbox/}" '
BEGIN{

    split(cats,names)

}
/^[^#]/{

    f[$2,$3]++
    fn[$3]++
    fp[$2]++

}
END{

    printf("Where do misclassifications go?\n(numbers on diagonal represent \"recall\")\n\n")

    printf("  true     | but predicted as...\n")
    printf("    *      | ")
    for(c in names) printf("%10s", names[c])
    printf("\n")

    for(c in names) {
	printf("%-10s | ", names[c])
	for(d in names) {
	    printf("%9.2f%%", 100 * f[names[c],names[d]]/fp[names[c]])
	}
	printf("\n")
    }

    printf("\n")

    printf("What is really in each category after prediction?\n(numbers on diagonal represent \"precision\")\n\n")

    printf("category   | contains mixture of...\n")
    printf("    *      | ")
    for(c in names) printf("%10s", names[c])
    printf("\n")

    for(c in names) {
	printf("%-10s | ", names[c])
	for(d in names) {
	    printf("%9.2f%%", 100 * f[names[d],names[c]]/fn[names[c]])
	}
	printf("\n")
    }

    printf("\n")

    x = y = 0
    for(c in names) {
	x += f[names[c],names[c]]
	for(d in names) {
	    y += f[names[c],names[d]]
	}
    }

    printf("Total correct classifications: %9.2f%%\n\n", (100 * x)/y)

}
'
}

plot_errors() {
    OUTFILE=$MXDIR/plots/`basename $1 .log`
    CMDFILE=$OUTFILE.cmd
    DATAFILE=$OUTFILE.plotdata
    TITLE=$2
    cat $1 \
	| grep -v '^#' \
	| cut -f1,2,3 -d ' ' \
	| awk '{count[$1]++; ecount[$1] += ($2 != $3); print (count[$1] == 1) ? "\n" : "", count[$1], ecount[$1]}' \
	> $DATAFILE
    shift 2
    OUTPUT="set terminal x11"
    SCALE="unset logscale"
    PAUSE="pause -1 \"Press any key...\""
    OUTPRINT=""
    for o in "$@"; do
	if [ "$o" = "ps" ]; then
	    OUTPUT="set terminal postscript"
	    OUTPRINT="set output \"$OUTFILE.ps\""
	    PAUSE=""
	    echo "writing $OUTFILE.ps"
	elif [ "$o" = "logscale" ]; then
	    SCALE="set logscale"
	fi
    done
    cat > $CMDFILE <<EOF
$OUTPUT
$OUTPRINT
$SCALE
unset key
set title "$TITLE"
plot "$DATAFILE" with points
$PAUSE
EOF
    gnuplot $CMDFILE
}

plot_biplot() {
    OUTFILE=$MXDIR/plots/$1
    CMDFILE=$OUTFILE.cmd
    DATAFILE=$OUTFILE.plotdata
    ERRORFILE=$OUTFILE.ploterrors
    TITLE=$1
    cat $2 \
	| grep -v '^#' \
	| awk '{print $5, $14}' \
	> $DATAFILE
    cat $2 \
	| grep -v '^#' \
	| awk '{if( (($2 == $3) && ($5 > $14)) || (($2 != $3) && ($5 < $14)) ) print }' \
	| awk '{print $5, $14}' \
	> $ERRORFILE
    shift 2
    OUTPUT="set terminal x11"
    SCALE="unset logscale"
    PAUSE="pause -1 \"Press any key...\""
    OUTPRINT=""
    for o in "$@"; do
	if [ "$o" = "ps" ]; then
	    OUTPUT="set terminal postscript"
	    OUTPRINT="set output \"$OUTFILE.ps\""
	    PAUSE=""
	    echo "writing $OUTFILE.ps"
	elif [ "$o" = "logscale" ]; then
	    SCALE="set logscale"
	fi
    done
    cat > $CMDFILE <<EOF
$OUTPUT
$OUTPRINT
$SCALE
unset key
set title "$TITLE"
plot "$DATAFILE" using 1:2 pt 1, "$ERRORFILE" using 1:2 pt 5, x

$PAUSE
EOF
    gnuplot $CMDFILE
}

# end mailtest.functions