File: dcmdump.man

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/*!

\if MANPAGES
\page dcmdump Dump DICOM file and data set
\else
\page dcmdump dcmdump: Dump DICOM file and data set
\endif

\section synopsis SYNOPSIS

\verbatim
dcmdump [options] dcmfile-in...
\endverbatim

\section description DESCRIPTION

The \b dcmdump utility dumps the contents of a DICOM file (file format or raw
data set) to stdout in textual form.  Attributes with very large value fields
(e.g. pixel data) can be described as "(not loaded)".  String value fields
will be delimited with square brackets ([]).  Known UIDs will be displayed by
their names prefixed by an equals sign (e.g. "=MRImageStorage") unless this
mapping would be explicitly switched off.  Empty value fields are described as
"(no value available)".

If \b dcmdump reads a raw data set (DICOM data without a file format
meta-header) it will attempt to guess the transfer syntax by examining the
first few bytes of the file.  It is not always possible to correctly guess the
transfer syntax and it is better to convert a data set to a file format
whenever possible (using the \b dcmconv utility).  It is also possible to use
the \e -f and <em>-t[ieb]</em> options to force \b dcmdump to read a dataset
with a particular transfer syntax.

\section parameters PARAMETERS

\verbatim
dcmfile-in  DICOM input file or directory to be dumped
\endverbatim

\section options OPTIONS

\subsection general_options general options
\verbatim
  -h   --help
         print this help text and exit

       --version
         print version information and exit

       --arguments
         print expanded command line arguments

  -q   --quiet
         quiet mode, print no warnings and errors

  -v   --verbose
         verbose mode, print processing details

  -d   --debug
         debug mode, print debug information

  -ll  --log-level  [l]evel: string constant
         (fatal, error, warn, info, debug, trace)
         use level l for the logger

  -lc  --log-config  [f]ilename: string
         use config file f for the logger
\endverbatim

\subsection input_options input options
\verbatim
input file format:

  +f   --read-file
         read file format or data set (default)

  +fo  --read-file-only
         read file format only

  -f   --read-dataset
         read data set without file meta information

input transfer syntax:

  -t=  --read-xfer-auto
         use TS recognition (default)

  -td  --read-xfer-detect
         ignore TS specified in the file meta header

  -te  --read-xfer-little
         read with explicit VR little endian TS

  -tb  --read-xfer-big
         read with explicit VR big endian TS

  -ti  --read-xfer-implicit
         read with implicit VR little endian TS

input files:

  +sd  --scan-directories
         scan directories for input files (dcmfile-in)

  +sp  --scan-pattern  [p]attern: string (only with --scan-directories)
         pattern for filename matching (wildcards)

         # possibly not available on all systems

  -r   --no-recurse
         do not recurse within directories (default)

  +r   --recurse
         recurse within specified directories

parsing of file meta information:

  +ml  --use-meta-length
         use file meta information group length (default)

  -ml  --ignore-meta-length
         ignore file meta information group length

parsing of odd-length attributes:

  +ao  --accept-odd-length
         accept odd length attributes (default)

  +ae  --assume-even-length
         assume real length is one byte larger

handling of non-standard VR:

  +vr  --treat-as-unknown
         treat non-standard VR as unknown (default)

  -vr  --assume-implicit
         try to read with implicit VR little endian TS

handling of undefined length UN elements:

  +ui  --enable-cp246
         read undefined len UN as implicit VR (default)

  -ui  --disable-cp246
         read undefined len UN as explicit VR

handling of defined length UN elements:

  -uc  --retain-un
         retain elements as UN (default)

  +uc  --convert-un
         convert to real VR if known

handling of private max-length elements (implicit VR):

  -sq  --maxlength-dict
         read as defined in dictionary (default)

  +sq  --maxlength-seq
         read as sequence with undefined length

automatic data correction:

  +dc  --enable-correction
         enable automatic data correction (default)

  -dc  --disable-correction
         disable automatic data correction

general handling of parser errors:

  +Ep  --ignore-parse-errors
         try to recover from parse errors

  -Ep  --handle-parse-errors
         handle parse errors and stop parsing (default)

other parsing options:

  +st  --stop-after-elem  [t]ag: "gggg,eeee" or dictionary name
         stop parsing after element specified by t

bitstream format of deflated input:

  +bd  --bitstream-deflated
         expect deflated bitstream (default)

  +bz  --bitstream-zlib
         expect deflated zlib bitstream
\endverbatim

\subsection output_options output options
\verbatim
loading:

  +M   --load-all
         load very long tag values (default)

  -M   --load-short
         do not load very long values (e.g. pixel data)

  +R   --max-read-length  [k]bytes: integer (4..4194302, default: 4)
         set threshold for long values to k kbytes

printing:

  +L   --print-all
         print long tag values completely

  -L   --print-short
         print long tag values shortened (default)

  +T   --print-tree
         print hierarchical structure as a simple tree

  -T   --print-indented
         print hierarchical structure indented (default)

  +F   --print-filename
         print header with filename for each input file

  +Fs  --print-file-search
         print header with filename only for those input files
         that contain one of the searched tags

  +Un  --map-uid-names
         map well-known UID numbers to names (default)

  -Un  --no-uid-names
         do not map well-known UID numbers to names

  +Qn  --quote-nonascii
         quote non-ASCII and control chars as XML markup

  -Qn  --print-nonascii
         print non-ASCII and control chars (default)

  +C   --print-color
         use ANSI escape codes for colored output

         # not available on Windows systems

error handling:

  -E   --stop-on-error
         do not print if file is damaged (default)

  +E   --ignore-errors
         attempt to print even if file is damaged

searching:

  +P   --search  [t]ag: "gggg,eeee" or dictionary name
         print the value of tag t this option can be specified
         multiple times (default: the complete file is printed)

  +s   --search-all
         print all instances of searched tags (default)

  -s   --search-first
         only print first instance of searched tags

  +p   --prepend
         prepend sequence hierarchy to printed tag,
         denoted by: (gggg,eeee).(gggg,eeee).*
         (only with --search-all or --search-first)

  -p   --no-prepend
         do not prepend hierarchy to tag (default)

writing:

  +W   --write-pixel  [d]irectory: string
         write pixel data to a .raw file stored in d
         (little endian, filename created automatically)
\endverbatim

\section logging LOGGING

The level of logging output of the various command line tools and underlying
libraries can be specified by the user.  By default, only errors and warnings
are written to the standard error stream.  Using option \e --verbose also
informational messages like processing details are reported.  Option
\e --debug can be used to get more details on the internal activity, e.g. for
debugging purposes.  Other logging levels can be selected using option
\e --log-level.  In \e --quiet mode only fatal errors are reported.  In such
very severe error events, the application will usually terminate.  For more
details on the different logging levels, see documentation of module "oflog".

In case the logging output should be written to file (optionally with logfile
rotation), to syslog (Unix) or the event log (Windows) option \e --log-config
can be used.  This configuration file also allows for directing only certain
messages to a particular output stream and for filtering certain messages
based on the module or application where they are generated.  An example
configuration file is provided in <em>\<etcdir\>/logger.cfg</em>).

\section command_line COMMAND LINE

All command line tools use the following notation for parameters: square
brackets enclose optional values (0-1), three trailing dots indicate that
multiple values are allowed (1-n), a combination of both means 0 to n values.

Command line options are distinguished from parameters by a leading '+' or '-'
sign, respectively.  Usually, order and position of command line options are
arbitrary (i.e. they can appear anywhere).  However, if options are mutually
exclusive the rightmost appearance is used.  This behaviour conforms to the
standard evaluation rules of common Unix shells.

In addition, one or more command files can be specified using an '@' sign as a
prefix to the filename (e.g. <em>\@command.txt</em>).  Such a command argument
is replaced by the content of the corresponding text file (multiple
whitespaces are treated as a single separator unless they appear between two
quotation marks) prior to any further evaluation.  Please note that a command
file cannot contain another command file.  This simple but effective approach
allows to summarize common combinations of options/parameters and avoids
longish and confusing command lines (an example is provided in file
<em>\<datadir\>/dumppat.txt</em>).

\section environment ENVIRONMENT

The \b dcmdump utility will attempt to load DICOM data dictionaries specified
in the \e DCMDICTPATH environment variable.  By default, i.e. if the
\e DCMDICTPATH environment variable is not set, the file
<em>\<datadir\>/dicom.dic</em> will be loaded unless the dictionary is built
into the application (default for Windows).

The default behaviour should be preferred and the \e DCMDICTPATH environment
variable only used when alternative data dictionaries are required.  The
\e DCMDICTPATH environment variable has the same format as the Unix shell
\e PATH variable in that a colon (":") separates entries.  On Windows systems,
a semicolon (";") is used as a separator.  The data dictionary code will
attempt to load each file specified in the \e DCMDICTPATH environment variable.
It is an error if no data dictionary can be loaded.

\section see_also SEE ALSO

<b>dump2dcm</b>(1), <b>dcmconv</b>(1)

\section copyright COPYRIGHT

Copyright (C) 1994-2010 by OFFIS e.V., Escherweg 2, 26121 Oldenburg, Germany.

*/