1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261
|
// ---------------------------------------------------------------------
//
// Copyright (C) 2009 - 2017 by the deal.II authors
//
// This file is part of the deal.II library.
//
// The deal.II library is free software; you can use it, redistribute
// it, and/or modify it under the terms of the GNU Lesser General
// Public License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
// The full text of the license can be found in the file LICENSE at
// the top level of the deal.II distribution.
//
// ---------------------------------------------------------------------
#include <deal.II/base/config.h>
#ifdef DEAL_II_WITH_P4EST
#include <deal.II/lac/vector.h>
#include <deal.II/lac/block_vector.h>
#include <deal.II/lac/la_parallel_vector.h>
#include <deal.II/lac/la_parallel_block_vector.h>
#include <deal.II/lac/petsc_parallel_vector.h>
#include <deal.II/lac/petsc_parallel_block_vector.h>
#include <deal.II/lac/trilinos_vector.h>
#include <deal.II/lac/trilinos_parallel_block_vector.h>
#include <deal.II/distributed/solution_transfer.h>
#include <deal.II/distributed/tria.h>
#include <deal.II/dofs/dof_tools.h>
#include <deal.II/dofs/dof_accessor.h>
#include <deal.II/grid/tria_accessor.h>
#include <deal.II/grid/tria_iterator.h>
#include <functional>
DEAL_II_NAMESPACE_OPEN
namespace parallel
{
namespace distributed
{
template <int dim, typename VectorType, typename DoFHandlerType>
SolutionTransfer<dim, VectorType, DoFHandlerType>::SolutionTransfer (const DoFHandlerType &dof)
:
dof_handler(&dof, typeid(*this).name()),
offset (numbers::invalid_unsigned_int)
{
Assert ((dynamic_cast<const parallel::distributed::Triangulation<dim,DoFHandlerType::space_dimension>*>
(&dof_handler->get_triangulation()) != nullptr),
ExcMessage("parallel::distributed::SolutionTransfer requires a parallel::distributed::Triangulation object."));
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::
prepare_for_coarsening_and_refinement (const std::vector<const VectorType *> &all_in)
{
input_vectors = all_in;
register_data_attach( get_data_size() * input_vectors.size() );
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::register_data_attach (const std::size_t size)
{
Assert(size > 0, ExcMessage("Please transfer at least one vector!"));
//TODO: casting away constness is bad
parallel::distributed::Triangulation<dim,DoFHandlerType::space_dimension> *tria
= (dynamic_cast<parallel::distributed::Triangulation<dim,DoFHandlerType::space_dimension>*>
(const_cast<dealii::Triangulation<dim,DoFHandlerType::space_dimension>*>
(&dof_handler->get_triangulation())));
Assert (tria != nullptr, ExcInternalError());
offset
= tria->register_data_attach(size,
std::bind(&SolutionTransfer<dim, VectorType,
DoFHandlerType>::pack_callback,
this,
std::placeholders::_1,
std::placeholders::_2,
std::placeholders::_3));
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::
prepare_for_coarsening_and_refinement (const VectorType &in)
{
std::vector<const VectorType *> all_in(1, &in);
prepare_for_coarsening_and_refinement(all_in);
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::prepare_serialization (const VectorType &in)
{
std::vector<const VectorType *> all_in(1, &in);
prepare_serialization(all_in);
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::prepare_serialization
(const std::vector<const VectorType *> &all_in)
{
prepare_for_coarsening_and_refinement (all_in);
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::deserialize (VectorType &in)
{
std::vector<VectorType *> all_in(1, &in);
deserialize(all_in);
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::deserialize (std::vector<VectorType *> &all_in)
{
register_data_attach( get_data_size() * all_in.size() );
// this makes interpolate() happy
input_vectors.resize(all_in.size());
interpolate(all_in);
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::interpolate (std::vector<VectorType *> &all_out)
{
Assert(input_vectors.size()==all_out.size(),
ExcDimensionMismatch(input_vectors.size(), all_out.size()) );
//TODO: casting away constness is bad
parallel::distributed::Triangulation<dim,DoFHandlerType::space_dimension> *tria
= (dynamic_cast<parallel::distributed::Triangulation<dim,DoFHandlerType::space_dimension>*>
(const_cast<dealii::Triangulation<dim,DoFHandlerType::space_dimension>*>
(&dof_handler->get_triangulation())));
Assert (tria != nullptr, ExcInternalError());
tria->notify_ready_to_unpack(offset,
std::bind(&SolutionTransfer<dim, VectorType,
DoFHandlerType>::unpack_callback,
this,
std::placeholders::_1,
std::placeholders::_2,
std::placeholders::_3,
std::ref(all_out)));
for (typename std::vector<VectorType *>::iterator it=all_out.begin();
it !=all_out.end();
++it)
(*it)->compress(::dealii::VectorOperation::insert);
input_vectors.clear();
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::interpolate (VectorType &out)
{
std::vector<VectorType *> all_out(1, &out);
interpolate(all_out);
}
template <int dim, typename VectorType, typename DoFHandlerType>
unsigned int
SolutionTransfer<dim, VectorType, DoFHandlerType>::get_data_size() const
{
return sizeof(typename VectorType::value_type)* DoFTools::max_dofs_per_cell(*dof_handler);
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::
pack_callback(const typename Triangulation<dim,DoFHandlerType::space_dimension>::cell_iterator &cell_,
const typename Triangulation<dim,DoFHandlerType::space_dimension>::CellStatus /*status*/,
void *data)
{
typename VectorType::value_type *data_store = reinterpret_cast<typename VectorType::value_type *>(data);
typename DoFHandlerType::cell_iterator cell(*cell_, dof_handler);
const unsigned int dofs_per_cell=cell->get_fe().dofs_per_cell;
::dealii::Vector<typename VectorType::value_type> dofvalues(dofs_per_cell);
for (typename std::vector<const VectorType *>::iterator it=input_vectors.begin();
it !=input_vectors.end();
++it)
{
cell->get_interpolated_dof_values(*(*it), dofvalues);
std::memcpy(data_store, &dofvalues(0), sizeof(typename VectorType::value_type)*dofs_per_cell);
data_store += dofs_per_cell;
}
}
template <int dim, typename VectorType, typename DoFHandlerType>
void
SolutionTransfer<dim, VectorType, DoFHandlerType>::unpack_callback
(const typename Triangulation<dim,DoFHandlerType::space_dimension>::cell_iterator &cell_,
const typename Triangulation<dim,DoFHandlerType::space_dimension>::CellStatus /*status*/,
const void *data,
std::vector<VectorType *> &all_out)
{
typename DoFHandlerType::cell_iterator
cell(*cell_, dof_handler);
const unsigned int dofs_per_cell=cell->get_fe().dofs_per_cell;
::dealii::Vector<typename VectorType::value_type> dofvalues(dofs_per_cell);
const typename VectorType::value_type *data_store = reinterpret_cast<const typename VectorType::value_type *>(data);
for (typename std::vector<VectorType *>::iterator it = all_out.begin();
it != all_out.end();
++it)
{
std::memcpy(&dofvalues(0), data_store, sizeof(typename VectorType::value_type)*dofs_per_cell);
cell->set_dof_values_by_interpolation(dofvalues, *(*it));
data_store += dofs_per_cell;
}
}
}
}
// explicit instantiations
#include "solution_transfer.inst"
DEAL_II_NAMESPACE_CLOSE
#endif
|