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// ------------------------------------------------------------------------
//
// SPDX-License-Identifier: LGPL-2.1-or-later
// Copyright (C) 2019 - 2024 by the deal.II authors
//
// This file is part of the deal.II library.
//
// Part of the source code is dual licensed under Apache-2.0 WITH
// LLVM-exception OR LGPL-2.1-or-later. Detailed license information
// governing the source code and code contributions can be found in
// LICENSE.md and CONTRIBUTING.md at the top level directory of deal.II.
//
// ------------------------------------------------------------------------
#ifndef dealii_distributed_cell_data_transfer_h
#define dealii_distributed_cell_data_transfer_h
#include <deal.II/base/config.h>
#include <deal.II/base/observer_pointer.h>
#include <deal.II/distributed/tria.h>
#include <deal.II/numerics/adaptation_strategies.h>
#include <boost/range/iterator_range.hpp>
#include <functional>
DEAL_II_NAMESPACE_OPEN
namespace parallel
{
namespace distributed
{
/**
* Transfer data that is associated with each active cell (like error
* indicators) while refining and/or coarsening a distributed triangulation
* and handle the necessary communication.
*
* This class therefore does for cell-related information what
* parallel::distributed::SolutionTransfer does for the values of degrees of
* freedom defined on a parallel::distributed::Triangulation.
*
* This class has been designed to operate on any kind of datatype that is
* serializable. A non-distributed container (like Vector or `std::vector`)
* has to be provided, which holds the cell-wise data in the same order as
* active cells are traversed. In other words, each entry corresponds to the
* cell with the same index CellAccessor::active_cell_index(), and the
* container has to be of size Triangulation::n_active_cells().
*
* <h3>Transferring cell-wise data</h3>
*
* The following code snippet demonstrates how to transfer cell-related data
* across refinement/coarsening of the registered triangulation.
*
* @code
* // prepare the triangulation,
* triangulation.prepare_coarsening_and_refinement();
*
* // prepare the CellDataTransfer object for coarsening and refinement
* // and give the cell data vector that we intend to unpack later,
* Vector<double> data_to_transfer(triangulation.n_active_cells());
* //[fill data_to_transfer with cell-wise values...]
*
* parallel::distributed::CellDataTransfer<dim, spacedim, Vector<double>>
* cell_data_trans(triangulation);
* cell_data_trans.prepare_for_coarsening_and_refinement(data_to_transfer);
*
* // actually execute the refinement,
* triangulation.execute_coarsening_and_refinement();
*
* // unpack transferred data,
* Vector<double> transferred_data(triangulation.n_active_cells());
* cell_data_trans.unpack(transferred_data);
*
* @endcode
*
*
* <h3>Use for serialization</h3>
*
* This class can be used to serialize and later deserialize a distributed
* mesh with attached data to separate files.
*
* For serialization, the following code snippet saves not only the
* triangulation itself, but also the cell-wise data attached:
* @code
* Vector<double> data_to_transfer(triangulation.n_active_cells());
* //[fill data_to_transfer with cell-wise values...]
*
* parallel::distributed::CellDataTransfer<dim, spacedim, Vector<double>>
* cell_data_trans(triangulation);
* cell_data_trans.prepare_for_serialization(data_to_transfer);
*
* triangulation.save(filename);
* @endcode
*
* Later, during deserialization, both triangulation and data can be
* restored as follows:
* @code
* //[create coarse mesh...]
* triangulation.load(filename);
*
* parallel::distributed::CellDataTransfer<dim, spacedim, Vector<double>>
* cell_data_trans(triangulation);
* Vector<double> transferred_data(triangulation.n_active_cells());
* cell_data_trans.deserialize(transferred_data);
* @endcode
*
* @note If you use more than one object to transfer data via the
* parallel::distributed::Triangulation::register_data_attach() and
* parallel::distributed::Triangulation::notify_ready_for_unpack() interface
* with the aim of serialization, the calls to the corresponding
* prepare_for_serialization() and deserialize() functions need to happen in
* the same order, respectively. Classes relying on this interface are e.g.
* parallel::distributed::CellDataTransfer,
* parallel::distributed::SolutionTransfer, and Particles::ParticleHandler.
*
* @note See the documentation of parallel::distributed::SolutionTransfer for
* matching code snippets for both transfer and serialization.
*
* @ingroup distributed
*/
template <int dim, int spacedim = dim, typename VectorType = Vector<double>>
class CellDataTransfer
{
private:
/**
* An alias that defines the data type of provided container template.
*/
using value_type = typename VectorType::value_type;
public:
/**
* Constructor.
*
* @param[in] triangulation The triangulation on which all operations will
* happen. At the time when this constructor is called, the refinement
* in question has not happened yet.
* @param[in] transfer_variable_size_data Specify whether your VectorType
* container stores values that differ in size. A varying amount of data
* may be packed per cell, if for example the underlying ValueType of
* the VectorType container is a container itself.
* @param[in] refinement_strategy %Function deciding how data will be
* stored on refined cells from its parent cell.
* @param[in] coarsening_strategy %Function deciding which data to store
* on a cell whose children will get coarsened into.
*/
CellDataTransfer(
const parallel::distributed::Triangulation<dim, spacedim>
&triangulation,
const bool transfer_variable_size_data = false,
const std::function<std::vector<value_type>(
const typename dealii::Triangulation<dim, spacedim>::cell_iterator
&parent,
const value_type parent_value)> refinement_strategy =
&dealii::AdaptationStrategies::Refinement::
preserve<dim, spacedim, value_type>,
const std::function<value_type(
const typename dealii::Triangulation<dim, spacedim>::cell_iterator
&parent,
const std::vector<value_type> &children_values)> coarsening_strategy =
&dealii::AdaptationStrategies::Coarsening::
check_equality<dim, spacedim, value_type>);
/**
* Prepare the current object for coarsening and refinement.
*
* It registers the data transfer of @p in on the underlying triangulation.
* @p in includes data to be interpolated onto the new (refined and/or
* coarsened) grid. See documentation of this class for more information
* on how to use this functionality.
*
* This function can be called only once for the specified container
* until data transfer has been completed. If multiple vectors shall be
* transferred via this class, use the function below.
*/
void
prepare_for_coarsening_and_refinement(const VectorType &in);
/**
* Same as the function above, only for a list of vectors.
*/
void
prepare_for_coarsening_and_refinement(
const std::vector<const VectorType *> &all_in);
/**
* Prepare the serialization of the given vector.
*
* The serialization is done by Triangulation::save(). See documentation
* of this class for more information on how to use this functionality.
*
* This function can be called only once for the specified container
* until data transfer has been completed. If multiple vectors shall be
* transferred via this class, use the function below.
*/
void
prepare_for_serialization(const VectorType &in);
/**
* Same as the function above, only for a list of vectors.
*/
void
prepare_for_serialization(const std::vector<const VectorType *> &all_in);
/**
* Unpack the information previously stored in this object before
* the mesh was refined or coarsened onto the current set of cells.
*/
void
unpack(VectorType &out);
/**
* Same as the function above, only for a list of vectors.
*/
void
unpack(std::vector<VectorType *> &all_out);
/**
* Execute the deserialization of the stored information.
* This needs to be done after calling Triangulation::load().
*/
void
deserialize(VectorType &out);
/**
* Same as the function above, only for a list of vectors.
*/
void
deserialize(std::vector<VectorType *> &all_out);
private:
/**
* Pointer to the triangulation to work with.
*/
ObserverPointer<const parallel::distributed::Triangulation<dim, spacedim>,
CellDataTransfer<dim, spacedim, VectorType>>
triangulation;
/**
* Specifies if size of data to transfer varies from cell to cell.
*/
const bool transfer_variable_size_data;
/**
* %Function deciding how data will be stored on refined cells from its
* parent cell.
*/
const std::function<std::vector<value_type>(
const typename Triangulation<dim, spacedim>::cell_iterator &parent,
const value_type parent_value)>
refinement_strategy;
/**
* %Function deciding on how to process data from children to be stored on
* the parent cell.
*/
const std::function<value_type(
const typename Triangulation<dim, spacedim>::cell_iterator &parent,
const std::vector<value_type> &children_values)>
coarsening_strategy;
/**
* A vector that stores pointers to all the vectors we are supposed to
* copy over from the old to the new mesh.
*/
std::vector<const VectorType *> input_vectors;
/**
* The handle that triangulation has assigned to this object
* with which we can access our memory offset and our pack function.
*/
unsigned int handle;
/**
* Registers the pack_callback() function to the triangulation
* and stores the returning handle.
*/
void
register_data_attach();
/**
* A callback function used to pack the data on the current mesh into
* objects that can later be retrieved after refinement, coarsening and
* repartitioning.
*/
std::vector<char>
pack_callback(const typename parallel::distributed::
Triangulation<dim, spacedim>::cell_iterator &cell,
const CellStatus status);
/**
* A callback function used to unpack the data on the current mesh that
* has been packed up previously on the mesh before refinement,
* coarsening and repartitioning.
*/
void
unpack_callback(
const typename parallel::distributed::Triangulation<dim, spacedim>::
cell_iterator &cell,
const CellStatus status,
const boost::iterator_range<std::vector<char>::const_iterator>
&data_range,
std::vector<VectorType *> &all_out);
};
} // namespace distributed
} // namespace parallel
DEAL_II_NAMESPACE_CLOSE
#endif /* dealii_distributed_cell_data_transfer_h */
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