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Source: deepnano
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Çağrı ULAŞ <cagriulas@gmail.com>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 12~),
python-all,
dh-python,
python-markdown,
python-theano
Standards-Version: 4.3.0
Vcs-Browser: https://salsa.debian.org/med-team/deepnano
Vcs-Git: https://salsa.debian.org/med-team/deepnano.git
Homepage: https://bitbucket.org/vboza/deepnano
Package: deepnano
Architecture: any
Depends: ${python:Depends},
${misc:Depends},
${shlibs:Depends},
python-h5py,
python-numpy,
python-dateutil,
python-theano,
deepnano-data
Recommends: python-watchdog
Description: alternative basecaller for MinION reads of genomic sequences
DeepNano is alternative basecaller for Oxford Nanopore MinION reads
based on deep recurrent neural networks.
.
Currently it works with SQK-MAP-006 and SQK-MAP-005 chemistry and as a
postprocessor for Metrichor.
Package: deepnano-data
Architecture: all
Depends: ${misc:Depends}
Suggests: deepnano
Description: alternative basecaller for MinION reads of genomic sequences (data)
DeepNano is alternative basecaller for Oxford Nanopore MinION reads
based on deep recurrent neural networks.
.
This package contains deepnanos test data.
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