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Source: dialign-t
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 11~)
Standards-Version: 4.2.1
Vcs-Browser: https://salsa.debian.org/med-team/dialign-t
Vcs-Git: https://salsa.debian.org/med-team/dialign-t.git
Homepage: http://dialign-tx.gobics.de/
Package: dialign-tx
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
dialign-tx-data (= ${source:Version})
Enhances: t-coffee
Description: Segment-based multiple sequence alignment
DIALIGN-TX is a command line tool to perform multiple alignment of protein or
DNA sequences. It is a complete reimplementation of the segment-base approach
including several new improvements and heuristics that significantly enhance
the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T.
For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that
favours chains of low-scoring local alignments over isolated high-scoring
fragments. For multiple alignment, DIALIGN-TX uses an improved greedy
procedure that is less sensitive to spurious local sequence similarities.
Package: dialign-tx-data
Architecture: all
Depends: ${misc:Depends}
Enhances: dialign-tx
Description: Segment-based multiple sequence alignment (data files)
DIALIGN-TX is a command line tool to perform multiple alignment of protein or
DNA sequences. It is a complete reimplementation of the segment-base approach
including several new improvements and heuristics that significantly enhance
the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T.
For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that
favours chains of low-scoring local alignments over isolated high-scoring
fragments. For multiple alignment, DIALIGN-TX uses an improved greedy
procedure that is less sensitive to spurious local sequence similarities.
.
This package contain the score matrices and probability distribution files
that DIALIGN-TX needs to align peptidic and nucleic sequences.
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