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Source: dialign-t
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>
Build-Depends: debhelper (>= 7), cdbs
Standards-Version: 3.9.1
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/dialign-t/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/dialign-t/trunk/
Homepage: http://dialign-tx.gobics.de/
Package: dialign-tx
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}, dialign-tx-data (= ${source:Version})
Conflicts: dialign-t, dialign-t-doc
Replaces: dialign-t, dialign-t-doc
Provides: dialign-t, dialign-t-doc
Enhances: t-coffee
Description: Segment-based multiple sequence alignment
DIALIGN-TX is a command line tool to perform multiple alignment of protein or
DNA sequences. It is a complete reimplementation of the segment-base approach
including several new improvements and heuristics that significantly enhance
the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T.
For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that
favours chains of low-scoring local alignments over isolated high-scoring
fragments. For multiple alignment, DIALIGN-TX uses an improved greedy
procedure that is less sensitive to spurious local sequence similarities.
Package: dialign-tx-data
Architecture: all
Depends: ${misc:Depends}
Recommends: dialign-tx (= ${binary:Version})
Description: Common data files for dialign-tx
This package contain the score matrices and probability distribution files
that DIALIGN-TX needs to align peptidic and nucleic sequences.
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