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installation guide for
DIALIGN2
========
program code written by
Burkhard Morgenstern and Said Abdeddaim
e-mail contact: dialign@gobics.de
(1) cd to the directory `src' that contains the dialign source code
(2) type `make' to compile the program. This should create an executable
binary file called `dialign2-2'.
(3) you may remove all object files (type `rm *.o')
(4) to run DIALIGN2, you must create an environment variable
`DIALIGN2_DIR' pointing to the directory `dialign2_dir'
(type `setenv DIALIGN2_DIR /your_path/dialign2_dir/' where
`your_path' is the directory where you de-tarred the file with the
sources)
The program needs the files
tp400_dna
tp400_prot
tp400_trans
BLOSUM
that are contained in the directory `dialign2_dir'. You may move
these files to any other directory and set DIALIGN2_DIR accordingly.
Please note that, unlike in the first version of DIALIGN, it is NOT
POSSIBLE to replace the BLOSUM matrix by other similarity matrices !!
DIALIGN comes with a detailed user guide. For additional information, please
consult the DIALIGN home page at
http://bibiserv.techfak.uni-bielefeld.de/dialign/
----------------------------------------------------------------------------
BM, Goettingen, February 2003
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