File: relion_tutorial_data.yml

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name: Relion 3.1 processed tutorial data
author: Sjors H. W. Scheres (2019)
license: CC-BY 4.0
url: ftp://ftp.mrc-lmb.cam.ac.uk/pub/scheres/relion31_tutorial.pdf
description: >
    Beta-galactosidase data set collected by Takayuki Kato from the Namba group at
    Osaka university, Japan (EMPIAR-10204) processed by RELION 3.1 as outlined in
    the RELION 3.1 tutorial.

data:
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