1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
|
from __future__ import annotations
from unittest import mock
import dials.util.phil
from dials.array_family import flex
@mock.patch("dials.util.phil.ExperimentListFactory")
def test(ExperimentListFactory, dials_data):
# Only use these filenames for verification
path = dials_data("centroid_test_data", pathlib=True)
experiments_path = path / "experiments.json"
reflections_path1 = path / "integrated.pickle"
reflections_path2 = path / "integrated.refl"
phil_scope = dials.util.phil.parse(
f"""
input {{
reflections1 = {reflections_path1}
.type = reflection_table
reflections2 = {reflections_path2}
.type = reflection_table
experiments = {experiments_path}
.type = experiment_list
}}
"""
)
params = phil_scope.extract()
# Check the right filenames were parsed
assert params.input.reflections1.filename == str(reflections_path1)
assert params.input.reflections2.filename == str(reflections_path2)
assert params.input.experiments.filename == str(experiments_path)
# Check that we got the expected objects back
assert isinstance(params.input.experiments.data, mock.Mock)
assert isinstance(params.input.reflections1.data, flex.reflection_table)
assert isinstance(params.input.reflections2.data, flex.reflection_table)
# Check we had the correct calls made
assert ExperimentListFactory.from_json_file.call_args[0] == (str(experiments_path),)
|
