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|
#!/bin/bash
#--------------------------------------------------------------#
# Continuous integration script for Jenkins #
#--------------------------------------------------------------#
#
# Default mode :
# This script will exit with error (exit code 1) if any of its steps fails.
# To change this behaviour, choose DO_NOT_STOP_AT_ERROR in Jenkins (see below).
#--------------------------------------------------------------#
set +xv
echo "
-----------------------------------------
Miscellaneous information
-----------------------------------------
date : `date`
hostname : `hostname`
pwd : `pwd`
-----------------------------------------
Jenkins build parameters (user defined)
-----------------------------------------
BRANCH_TO_BUILD : ${BRANCH_TO_BUILD}
INRIA_FORGE_LOGIN : ${INRIA_FORGE_LOGIN}
DO_NOT_STOP_AT_ERROR : ${DO_NOT_STOP_AT_ERROR}
-----------------------------------------
Jenkins build parameters (built in)
-----------------------------------------
BUILD_NUMBER : ${BUILD_NUMBER}
JENKINS_HOME : ${JENKINS_HOME}
WORKSPACE : ${WORKSPACE}
"
error_code () { [ "$DO_NOT_STOP_AT_ERROR" = "true" ] && { return 0 ; } }
[ "$DO_NOT_STOP_AT_ERROR" != "true" ] && { set -e ; } || { echo "(!) DEBUG mode, the script will NOT stop..." ; echo; }
set -xv
# quick look at resources
#-----------------------------------------------
free -h
#-----------------------------------------------
lstopo
#-----------------------------------------------
df -kh
#-----------------------------------------------
################################################################
# COMPILATION #
################################################################
gcc --version
g++ --version
[ `gcc -dumpversion` = 4.7 ] && { echo "GCC 4.7"; } || { echo "GCC version is not 4.7, we exit"; exit 1; }
JENKINS_TASK=tool-${TOOL_NAME}-build-debian7-64bits-gcc-4.7-gitlab
JENKINS_WORKSPACE=$WORKSPACE/$JENKINS_TASK/
GIT_DIR=/scratchdir/builds/workspace/gatb-${TOOL_NAME}
BUILD_DIR=/scratchdir/$JENKINS_TASK/gatb-${TOOL_NAME}/build
rm -rf $BUILD_DIR
mkdir -p $BUILD_DIR
mkdir -p $JENKINS_WORKSPACE
#-----------------------------------------------
# we need gatb-core submodule to be initialized
cd $GIT_DIR
git submodule init
git submodule update
#-----------------------------------------------
cd $BUILD_DIR
#-----------------------------------------------
cmake -Wno-dev -DJENKINS_TAG=${BRANCH_TO_BUILD} $GIT_DIR
#-----------------------------------------------
make -j 2 || error_code
################################################################
# TEST #
################################################################
# prepare data and scripts
cp $GIT_DIR/run_discoSnp++.sh ..
cp -R $GIT_DIR/scripts/ ..
cp -R $GIT_DIR/test/ ..
# run tests
cd ../test
./simple_test.sh || error_code
# cleanup disk space
cd ..
rm -rf scripts test run_discoSnp++.sh
# go bask to build for packaging step
cd build
################################################################
# PACKAGING #
################################################################
#-- Upload bin bundle as a build artifact
# -> bin bundle *-bin-Linux.tar.gz will be archived as a build artifact
# -> source package is handled by the osx task
if [ $? -eq 0 ] && [ "$INRIA_FORGE_LOGIN" != none ] && [ "$DO_NOT_STOP_AT_ERROR" != true ]; then
echo "Creating a binary archive... "
echo "N.B. this is NOT an official binary release"
make package
pwd
ls -atlhrsF
#-- Move the generated bin bundle to the workspace (so that it can be uploaded as a Jenkins job artifact)
mv *-${BRANCH_TO_BUILD}-bin-Linux.tar.gz $JENKINS_WORKSPACE/
fi
|
