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#!/usr/bin/make -f
# Remove binaries and shared objects (.so): find disulfind \( \( -name '*.o' \) -o \( -type f -exec bash -c '[[ $(file "{}") =~ ELF.*(executable|object) ]];' \; \) \) -ls -delete
PACKAGE := disulfinder
# upstream version is 1.2, our version is 8
VERSION := 1.2.11
DISTDIR := $(PACKAGE)-$(VERSION)
DISULFARCH := disulfind.tgz
DISULFDIR := disulfind
MAN1PAGES := disulfinder.1
prefix := /usr
docdir := $(prefix)/share/doc/$(PACKAGE)
CXXFLAGS += -DDEFAULT_PKGDATADIR=\"$(prefix)/share/disulfinder\"
export CXXFLAGS
.PHONY: all
all: disulfinder doc
.PHONY: disulfinder
disulfinder:
$(MAKE) -C disulfind/src disulfinder
.PHONY: doc
doc: $(MAN1PAGES)
%.1: %.pod
sed -e 's|__datadir__|$(datadir)|g;s|__docdir__|$(docdir)|g;s|__pkgdatadir__|$(pkgdatadir)|g;s|__PREFIX__|$(prefix)|g;s|__sysconfdir__|$(sysconfdir)|g;s|__VERSION__|$(VERSION)|g;' "$<" | \
pod2man -c 'User Commands' -r '$(VERSION)' -name $(shell echo "$(basename $@)" | tr '[:lower:]' '[:upper:]') > "$@"
.PHONY: untar
untar: $(DISULFDIR)
$(DISULFDIR):
tar -xvzf $(DISULFARCH) --exclude 'disulfind/src/BRNN/boost*' --exclude 'disulfind/src/BRNN/test' --exclude 'disulfind/Models/conn/data/sequences_w5' \
--exclude disulfind/src/tmp/disulfind_conn_train.tgz --exclude disulfind/src/BRNN/RNNs.tgz && rm -f initial-clean-stamp patch-stamp
install:
$(MAKE) -C $(DISULFDIR)/src install
mkdir -p $(DESTDIR)$(prefix)/share/man/man1 && cp $(MAN1PAGES) $(DESTDIR)$(prefix)/share/man/man1/
mkdir -p $(DESTDIR)$(docdir)/examples && cp examples/res_id_* $(DESTDIR)$(docdir)/examples/
clean:
if [ -e "$(DISULFDIR)/src/Makefile" ]; then $(MAKE) -C $(DISULFDIR)/src clean; fi
rm -f *.[12345678] *.[12345678].gz
distclean: clean
#if [ -d "$(DISULFDIR)" ]; then rm -rf $(DISULFDIR); fi
if [ -d "$(DISTDIR)" ]; then rm -rf "$(DISTDIR)"; fi
rm -rf patch-stamp \
initial-clean-stamp \
"$(DISTDIR).tar.gz" \
.pc
dist: distdir
tar chof - "$(DISTDIR)" | gzip -c > "$(DISTDIR).tar.gz"
rm -rf "$(DISTDIR)"
distdir: clean
rm -rf "$(DISTDIR)" && mkdir -p "$(DISTDIR)" && \
rsync -avC \
--exclude /*-stamp \
--exclude .*.swp \
--exclude *.o \
examples \
ChangeLog \
COPYING \
Makefile \
disulfind \
disulfinder.pod \
Makefile \
"$(DISTDIR)/";
help:
@echo "Rules:"
@echo "all*"
@echo "*disulfinder"
@echo "*doc"
@echo "install"
@echo " set DESTDIR and prefix as needed"
@echo "clean"
@echo "distclean"
@echo "dist - create tar.gz package"
@echo "untar"
@echo "help"
# vim:ai:
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