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Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: ea-utils
Source: https://github.com/ExpressionAnalysis/ea-utils
Files-Excluded: */google
                */samtools
                */sparsehash*

Files: *
Copyright: © 2011 Erik Aronesty <erik@q32.com>
             2003-2006 Heng Li <lh3lh3@live.co.uk>
             2008 Jue Ruan <ruanjue@gmail.com>
             Gunjan Hariani,
             2008-2009 Genome Research Ltd.,
             2010 Illumina, Inc
License: MIT

Files: razf.c
Copyright:  2008, Jue Ruan <ruanjue@gmail.com>, Heng Li <lh3@sanger.ac.uk>
License: BSD-2-clause
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions
 are met:
 1. Redistributions of source code must retain the above copyright
    notice, this list of conditions and the following disclaimer.
 2. Redistributions in binary form must reproduce the above copyright
    notice, this list of conditions and the following disclaimer in the
    documentation and/or other materials provided with the distribution.
 .
 THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 ARE DISCLAIMED.  IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE
 FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
 OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
 OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
 SUCH DAMAGE.

Files: randomFQ
Copyright: 2011 Erik Aronesty (earonesty@xpressionanalysis.com)
                Expression Analysis
License: GPL-3+
 This program is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation, either version 3 of the License, or
 (at your option) any later version.
 .
 This program is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU General Public License for more details.
 .
 On Debian systems you can find the full text of the GNU General Public
 License version 3 at /usr/share/common-licenses/GPL-3.

Files: debian/*
Copyright: © 2014 Tim Booth <tbooth@ceh.ac.uk>
           © 2015 Andreas Tille <tille@debian.org>
License: MIT

Files: debian/tests/data/*
Copyright: NCBI
License: PD

License: MIT
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal
 in the Software without restriction, including without limitation the rights
 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 copies of the Software, and to permit persons to whom the Software is
 furnished to do so, subject to the following conditions:
 .
 The above copyright notice and this permission notice shall be included in
 all copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
 THE SOFTWARE.

License: PD
                                  PUBLIC DOMAIN NOTICE
                     National Center for Biotechnology Information
 .
        This software/database is a "United States Government Work" under the
        terms of the United States Copyright Act.  It was written as part of
        the author's official duties as a United States Government employee and
        thus cannot be copyrighted.  This software/database is freely available
        to the public for use. The National Library of Medicine and the U.S.
        Government have not placed any restriction on its use or reproduction.
 .
        Although all reasonable efforts have been taken to ensure the accuracy
        and reliability of the software and data, the NLM and the U.S.
        Government do not and cannot warrant the performance or results that
        may be obtained by using this software or data. The NLM and the U.S.
        Government disclaim all warranties, express or implied, including
        warranties of performance, merchantability or fitness for any particular
        purpose.
 .
        Please cite the author in any work or product based on this material.